RNA–Protein interactions for RNA: ENST00000506436.1

LARS-208, Transcript of leucyl-tRNA synthetase, human

TSL 3

Gene LARS, Length 539 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LARS-208	ENST00000506436	SIGLEC1	Q9BZZ2	1709 aa		19	■□□□□ 0.63
LARS-208	ENST00000506436	LTBP4	Q8N2S1	1624 aa		18.99	■□□□□ 0.63
LARS-208	ENST00000506436	RAPGEF6	Q8TEU7	1601 aa		18.97	■□□□□ 0.63
LARS-208	ENST00000506436	ATP10A	O60312	1499 aa		18.95	■□□□□ 0.62
LARS-208	ENST00000506436	HECW1	Q76N89	1606 aa		18.94	■□□□□ 0.62
LARS-208	ENST00000506436	PLEKHD1	A6NEE1	506 aa		18.94	■□□□□ 0.62
LARS-208	ENST00000506436	C9orf84	Q5VXU9	1444 aa		18.93	■□□□□ 0.62
LARS-208	ENST00000506436	CEBPA	P49715	358 aa	Predicted RBP	18.93	■□□□□ 0.62
LARS-208	ENST00000506436	PRX	Q9BXM0	1461 aa		18.92	■□□□□ 0.62
LARS-208	ENST00000506436	P3H3	Q8IVL6	736 aa		18.91	■□□□□ 0.62
LARS-208	ENST00000506436	NUP153	P49790	1475 aa	Known RBP	18.9	■□□□□ 0.62
LARS-208	ENST00000506436	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
LARS-208	ENST00000506436	SAMD9	Q5K651	1589 aa		18.89	■□□□□ 0.61
LARS-208	ENST00000506436	SCAPER	Q9BY12	1400 aa		18.87	■□□□□ 0.61
LARS-208	ENST00000506436	NCOA1	Q15788	1441 aa		18.84	■□□□□ 0.61
LARS-208	ENST00000506436	UBAP1L	F5GYI3	381 aa		18.84	■□□□□ 0.61
LARS-208	ENST00000506436	TRAPPC8	Q9Y2L5	1435 aa		18.83	■□□□□ 0.6
LARS-208	ENST00000506436	PLCH2	O75038	1416 aa		18.82	■□□□□ 0.6
LARS-208	ENST00000506436	ZNF518A	Q6AHZ1	1483 aa		18.77	■□□□□ 0.6
LARS-208	ENST00000506436	RERE	Q9P2R6	1566 aa		18.77	■□□□□ 0.6
LARS-208	ENST00000506436	ESF1	Q9H501	851 aa	Known RBP	18.77	■□□□□ 0.6
LARS-208	ENST00000506436	C3	P01024	1663 aa		18.76	■□□□□ 0.59
LARS-208	ENST00000506436	EFCAB2	Q5VUJ9	269 aa		18.76	■□□□□ 0.59
LARS-208	ENST00000506436	MED1	Q15648	1581 aa	Predicted RBP	18.76	■□□□□ 0.59
LARS-208	ENST00000506436	AGL	P35573	1532 aa		18.74	■□□□□ 0.59
LARS-208	ENST00000506436	CNTLN	Q9NXG0	1405 aa		18.74	■□□□□ 0.59
LARS-208	ENST00000506436	KDM5C	P41229	1560 aa		18.72	■□□□□ 0.59
LARS-208	ENST00000506436	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.72	■□□□□ 0.59
LARS-208	ENST00000506436	NPAT	Q14207	1427 aa		18.71	■□□□□ 0.59
LARS-208	ENST00000506436	CAMSAP1	Q5T5Y3	1602 aa		18.71	■□□□□ 0.58
LARS-208	ENST00000506436	PKD2	Q13563	968 aa		18.69	■□□□□ 0.58
LARS-208	ENST00000506436	DIP2C	Q9Y2E4	1556 aa		18.68	■□□□□ 0.58
LARS-208	ENST00000506436	HSPA1L	P34931	641 aa		18.67	■□□□□ 0.58
LARS-208	ENST00000506436	PLA2R1	Q13018	1463 aa		18.66	■□□□□ 0.58
LARS-208	ENST00000506436	PHF23	Q9BUL5	403 aa	Predicted RBP	18.66	■□□□□ 0.58
LARS-208	ENST00000506436	MLH3	Q9UHC1	1453 aa		18.65	■□□□□ 0.58
LARS-208	ENST00000506436	MYO5C	Q9NQX4	1742 aa		18.65	■□□□□ 0.58
LARS-208	ENST00000506436	TOM1	O60784	492 aa		18.64	■□□□□ 0.57
LARS-208	ENST00000506436	AFAP1	Q8N556	730 aa		18.64	■□□□□ 0.57
LARS-208	ENST00000506436	MYT1L	Q9UL68	1186 aa		18.64	■□□□□ 0.57
LARS-208	ENST00000506436	NCKAP5L	Q9HCH0	1330 aa		18.63	■□□□□ 0.57
LARS-208	ENST00000506436	TCOF1	Q13428	1488 aa	Known RBP	18.61	■□□□□ 0.57
LARS-208	ENST00000506436	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.6	■□□□□ 0.57
LARS-208	ENST00000506436	MROH2A	A6NES4	1674 aa		18.6	■□□□□ 0.57
LARS-208	ENST00000506436	SCAF1	Q9H7N4	1312 aa	Known RBP	18.59	■□□□□ 0.57
LARS-208	ENST00000506436	ABCA6	Q8N139	1617 aa		18.59	■□□□□ 0.57
LARS-208	ENST00000506436	PPP6R1	Q9UPN7	881 aa		18.58	■□□□□ 0.56
LARS-208	ENST00000506436	CDK13	Q14004	1512 aa	Known RBP	18.58	■□□□□ 0.56
LARS-208	ENST00000506436	PIP4K2B	P78356	416 aa		18.57	■□□□□ 0.56
LARS-208	ENST00000506436	ARHGAP5	Q13017	1502 aa		18.57	■□□□□ 0.56
LARS-208	ENST00000506436	ZNF142	P52746	1687 aa	Predicted RBP	18.57	■□□□□ 0.56
LARS-208	ENST00000506436	CPS1	P31327	1500 aa		18.56	■□□□□ 0.56
LARS-208	ENST00000506436	ZMYM3	Q14202	1370 aa		18.55	■□□□□ 0.56
LARS-208	ENST00000506436	CSRNP3	Q8WYN3	585 aa		18.55	■□□□□ 0.56
LARS-208	ENST00000506436	PTPRK	Q15262	1439 aa		18.53	■□□□□ 0.56
LARS-208	ENST00000506436	KIF14	Q15058	1648 aa		18.52	■□□□□ 0.56
LARS-208	ENST00000506436	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	18.52	■□□□□ 0.56
LARS-208	ENST00000506436	RANGAP1	P46060	587 aa	Predicted RBP	18.51	■□□□□ 0.55
LARS-208	ENST00000506436	MYO3A	Q8NEV4	1616 aa		18.5	■□□□□ 0.55
LARS-208	ENST00000506436	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.49	■□□□□ 0.55
LARS-208	ENST00000506436	CLIP1	P30622	1438 aa		18.49	■□□□□ 0.55
LARS-208	ENST00000506436	TRO	Q12816	1431 aa	Predicted RBP	18.48	■□□□□ 0.55
LARS-208	ENST00000506436	SHANK2	Q9UPX8	1470 aa		18.46	■□□□□ 0.55
LARS-208	ENST00000506436	KIDINS220	Q9ULH0	1771 aa		18.45	■□□□□ 0.54
LARS-208	ENST00000506436	ABCC1	P33527	1531 aa		18.45	■□□□□ 0.54
LARS-208	ENST00000506436	FMN1	Q68DA7	1419 aa		18.45	■□□□□ 0.54
LARS-208	ENST00000506436	A2ML1	A8K2U0	1454 aa		18.42	■□□□□ 0.54
LARS-208	ENST00000506436	CDC42BPB	Q9Y5S2	1711 aa		18.41	■□□□□ 0.54
LARS-208	ENST00000506436	ITSN2	Q9NZM3	1697 aa		18.41	■□□□□ 0.54
LARS-208	ENST00000506436	EEA1	Q15075	1411 aa		18.4	■□□□□ 0.54
LARS-208	ENST00000506436	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.39	■□□□□ 0.53
LARS-208	ENST00000506436	PREX2	Q70Z35	1606 aa		18.38	■□□□□ 0.53
LARS-208	ENST00000506436	CLTC	Q00610	1675 aa	Known RBP	18.38	■□□□□ 0.53
LARS-208	ENST00000506436	DNMT1	P26358	1616 aa	Known RBP	18.37	■□□□□ 0.53
LARS-208	ENST00000506436	POLR1A	O95602	1720 aa	Predicted RBP	18.37	■□□□□ 0.53
LARS-208	ENST00000506436	RGS17	Q9UGC6	210 aa	Predicted RBP	18.36	■□□□□ 0.53
LARS-208	ENST00000506436	ALK	Q9UM73	1620 aa		18.36	■□□□□ 0.53
LARS-208	ENST00000506436	SAMD9L	Q8IVG5	1584 aa		18.34	■□□□□ 0.53
LARS-208	ENST00000506436	NEURL4	Q96JN8	1562 aa		18.34	■□□□□ 0.53
LARS-208	ENST00000506436	PLXNC1	O60486	1568 aa		18.34	■□□□□ 0.53
LARS-208	ENST00000506436	SPAG9	O60271	1321 aa	Known RBP	18.33	■□□□□ 0.53
LARS-208	ENST00000506436	VWDE	Q8N2E2	1590 aa		18.33	■□□□□ 0.52
LARS-208	ENST00000506436	ANKLE2	Q86XL3	938 aa		18.32	■□□□□ 0.52
LARS-208	ENST00000506436	MED14	O60244	1454 aa		18.3	■□□□□ 0.52
LARS-208	ENST00000506436	A2M	P01023	1474 aa		18.3	■□□□□ 0.52
LARS-208	ENST00000506436	GGT6	Q6P531	493 aa		18.29	■□□□□ 0.52
LARS-208	ENST00000506436	ATP7A	Q04656	1500 aa		18.28	■□□□□ 0.52
LARS-208	ENST00000506436	RNF17	Q9BXT8	1623 aa	Known RBP	18.27	■□□□□ 0.52
LARS-208	ENST00000506436	THEMIS	Q8N1K5	641 aa	Predicted RBP	18.27	■□□□□ 0.52
LARS-208	ENST00000506436	NPHP4	O75161	1426 aa	Predicted RBP	18.25	■□□□□ 0.51
LARS-208	ENST00000506436	DEPDC5	O75140	1603 aa		18.25	■□□□□ 0.51
LARS-208	ENST00000506436	TNR	Q92752	1358 aa		18.25	■□□□□ 0.51
LARS-208	ENST00000506436	SYNM	O15061	1565 aa		18.25	■□□□□ 0.51
LARS-208	ENST00000506436	LRRC7	Q96NW7	1537 aa		18.24	■□□□□ 0.51
LARS-208	ENST00000506436	KIAA1107	Q9UPP5	1409 aa		18.23	■□□□□ 0.51
LARS-208	ENST00000506436	INO80	Q9ULG1	1556 aa	Predicted RBP	18.23	■□□□□ 0.51
LARS-208	ENST00000506436	SYCP2	Q9BX26	1530 aa		18.23	■□□□□ 0.51
LARS-208	ENST00000506436	CCDC18	Q5T9S5	1454 aa		18.22	■□□□□ 0.51
LARS-208	ENST00000506436	PLEKHH2	Q8IVE3	1493 aa		18.22	■□□□□ 0.51
LARS-208	ENST00000506436	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.22	■□□□□ 0.51

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