RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 HSPA2P54652 639 aa13.38□□□□□ -0.27
ARHGEF28-207ENST00000506334 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
ARHGEF28-207ENST00000506334 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
ARHGEF28-207ENST00000506334 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
ARHGEF28-207ENST00000506334 DENND4BO75064 1496 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF28-207ENST00000506334 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
ARHGEF28-207ENST00000506334 POTEHQ6S545 545 aa13.33□□□□□ -0.28
ARHGEF28-207ENST00000506334 AKNAQ7Z591 1439 aa13.32□□□□□ -0.28
ARHGEF28-207ENST00000506334 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
ARHGEF28-207ENST00000506334 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF28-207ENST00000506334 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
ARHGEF28-207ENST00000506334 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
ARHGEF28-207ENST00000506334 SOCS7O14512 581 aa13.28□□□□□ -0.28
ARHGEF28-207ENST00000506334 ABCB7O75027 752 aa13.28□□□□□ -0.28
ARHGEF28-207ENST00000506334 MLECQ14165 292 aa13.28□□□□□ -0.28
ARHGEF28-207ENST00000506334 FANCAO15360 1455 aa13.28□□□□□ -0.28
ARHGEF28-207ENST00000506334 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
ARHGEF28-207ENST00000506334 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
ARHGEF28-207ENST00000506334 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
ARHGEF28-207ENST00000506334 MAGI2Q86UL8 1455 aa13.26□□□□□ -0.29
ARHGEF28-207ENST00000506334 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
ARHGEF28-207ENST00000506334 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
ARHGEF28-207ENST00000506334 ARHGEF40Q8TER5 1519 aa13.24□□□□□ -0.29
ARHGEF28-207ENST00000506334 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
ARHGEF28-207ENST00000506334 RICTORQ6R327 1708 aa13.23□□□□□ -0.29
ARHGEF28-207ENST00000506334 YEATS2Q9ULM3 1422 aa13.22□□□□□ -0.29
ARHGEF28-207ENST00000506334 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF28-207ENST00000506334 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF28-207ENST00000506334 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
ARHGEF28-207ENST00000506334 ZFYVE16Q7Z3T8 1539 aa13.21□□□□□ -0.29
ARHGEF28-207ENST00000506334 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
ARHGEF28-207ENST00000506334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.3
ARHGEF28-207ENST00000506334 ATP10AO60312 1499 aa13.2□□□□□ -0.3
ARHGEF28-207ENST00000506334 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
ARHGEF28-207ENST00000506334 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
ARHGEF28-207ENST00000506334 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
ARHGEF28-207ENST00000506334 PLCH2O75038 1416 aa13.19□□□□□ -0.3
ARHGEF28-207ENST00000506334 HECW1Q76N89 1606 aa13.17□□□□□ -0.3
ARHGEF28-207ENST00000506334 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
ARHGEF28-207ENST00000506334 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
ARHGEF28-207ENST00000506334 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
ARHGEF28-207ENST00000506334 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
ARHGEF28-207ENST00000506334 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
ARHGEF28-207ENST00000506334 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF28-207ENST00000506334 FER1L4A9Z1Z3 1794 aa13.13□□□□□ -0.31
ARHGEF28-207ENST00000506334 PTPRTO14522 1441 aa13.13□□□□□ -0.31
ARHGEF28-207ENST00000506334 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
ARHGEF28-207ENST00000506334 AFAP1Q8N556 730 aa13.12□□□□□ -0.31
ARHGEF28-207ENST00000506334 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
ARHGEF28-207ENST00000506334 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
ARHGEF28-207ENST00000506334 STRCQ7RTU9 1775 aa13.1□□□□□ -0.31
ARHGEF28-207ENST00000506334 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
ARHGEF28-207ENST00000506334 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF28-207ENST00000506334 EEA1Q15075 1411 aa13.09□□□□□ -0.31
ARHGEF28-207ENST00000506334 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF28-207ENST00000506334 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
ARHGEF28-207ENST00000506334 ZNF518AQ6AHZ1 1483 aa13.06□□□□□ -0.32
ARHGEF28-207ENST00000506334 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
ARHGEF28-207ENST00000506334 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
ARHGEF28-207ENST00000506334 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
ARHGEF28-207ENST00000506334 LTBP4Q8N2S1 1624 aa13.02□□□□□ -0.32
ARHGEF28-207ENST00000506334 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
ARHGEF28-207ENST00000506334 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
ARHGEF28-207ENST00000506334 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
ARHGEF28-207ENST00000506334 KDM5CP41229 1560 aa13□□□□□ -0.33
ARHGEF28-207ENST00000506334 REREQ9P2R6 1566 aa12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 AGLP35573 1532 aa12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 TROQ12816 1431 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 NCOA1Q15788 1441 aa12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 CNTLNQ9NXG0 1405 aa12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 UBAP1LF5GYI3 381 aa12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
ARHGEF28-207ENST00000506334 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
ARHGEF28-207ENST00000506334 CLIP1P30622 1438 aa12.97□□□□□ -0.33
ARHGEF28-207ENST00000506334 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
ARHGEF28-207ENST00000506334 PKD2Q13563 968 aa12.97□□□□□ -0.33
ARHGEF28-207ENST00000506334 DIP2CQ9Y2E4 1556 aa12.97□□□□□ -0.33
ARHGEF28-207ENST00000506334 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
ARHGEF28-207ENST00000506334 C3P01024 1663 aa12.96□□□□□ -0.33
ARHGEF28-207ENST00000506334 NPATQ14207 1427 aa12.96□□□□□ -0.34
ARHGEF28-207ENST00000506334 POLA2Q14181 598 aa12.95□□□□□ -0.34
ARHGEF28-207ENST00000506334 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
ARHGEF28-207ENST00000506334 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF28-207ENST00000506334 KIF14Q15058 1648 aa12.94□□□□□ -0.34
ARHGEF28-207ENST00000506334 ARHGAP35Q9NRY4 1499 aa12.92□□□□□ -0.34
ARHGEF28-207ENST00000506334 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
ARHGEF28-207ENST00000506334 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
ARHGEF28-207ENST00000506334 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
ARHGEF28-207ENST00000506334 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
ARHGEF28-207ENST00000506334 SPAG9O60271 1321 aaKnown RBP12.89□□□□□ -0.35
ARHGEF28-207ENST00000506334 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF28-207ENST00000506334 TOM1O60784 492 aa12.88□□□□□ -0.35
ARHGEF28-207ENST00000506334 HNRNPMP52272 730 aaKnown RBP eCLIP12.88□□□□□ -0.35
ARHGEF28-207ENST00000506334 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
ARHGEF28-207ENST00000506334 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
ARHGEF28-207ENST00000506334 GGT6Q6P531 493 aa12.87□□□□□ -0.35
ARHGEF28-207ENST00000506334 ABCC1P33527 1531 aa12.87□□□□□ -0.35
ARHGEF28-207ENST00000506334 HSPA1LP34931 641 aa12.86□□□□□ -0.35
ARHGEF28-207ENST00000506334 MROH2AA6NES4 1674 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms