RNA–Protein interactions for RNA: ENST00000505881.5

CPNE4-205, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-205ENST00000505881 TRIM35Q9UPQ4 493 aa8.7□□□□□ -1.02
CPNE4-205ENST00000505881 NLRP6P59044 892 aa8.69□□□□□ -1.02
CPNE4-205ENST00000505881 ASTLQ6HA08 431 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-205ENST00000505881 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
CPNE4-205ENST00000505881 ATMINO43313 823 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-205ENST00000505881 ATN1P54259 1190 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-205ENST00000505881 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
CPNE4-205ENST00000505881 SP7Q8TDD2 431 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-205ENST00000505881 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
CPNE4-205ENST00000505881 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
CPNE4-205ENST00000505881 CADPSQ9ULU8 1353 aa8.64□□□□□ -1.03
CPNE4-205ENST00000505881 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
CPNE4-205ENST00000505881 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-205ENST00000505881 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
CPNE4-205ENST00000505881 PPP1R37O75864 691 aa8.62□□□□□ -1.03
CPNE4-205ENST00000505881 MYT1Q01538 1121 aa8.62□□□□□ -1.03
CPNE4-205ENST00000505881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.03
CPNE4-205ENST00000505881 KDM2AQ9Y2K7 1162 aa8.62□□□□□ -1.03
CPNE4-205ENST00000505881 IER5LQ5T953 404 aa8.61□□□□□ -1.03
CPNE4-205ENST00000505881 CHD1O14646 1710 aa8.6□□□□□ -1.03
CPNE4-205ENST00000505881 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-205ENST00000505881 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
CPNE4-205ENST00000505881 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
CPNE4-205ENST00000505881 POTEIP0CG38 1075 aa8.57□□□□□ -1.04
CPNE4-205ENST00000505881 CADPS2Q86UW7 1296 aa8.57□□□□□ -1.04
CPNE4-205ENST00000505881 ZNF608Q9ULD9 1512 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-205ENST00000505881 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
CPNE4-205ENST00000505881 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
CPNE4-205ENST00000505881 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
CPNE4-205ENST00000505881 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-205ENST00000505881 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
CPNE4-205ENST00000505881 PLCG2P16885 1265 aa8.54□□□□□ -1.04
CPNE4-205ENST00000505881 SLC39A7Q92504 469 aa8.54□□□□□ -1.04
CPNE4-205ENST00000505881 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
CPNE4-205ENST00000505881 KDM4FA0A1W2PPD8 638 aa8.51□□□□□ -1.05
CPNE4-205ENST00000505881 C7P10643 843 aa8.51□□□□□ -1.05
CPNE4-205ENST00000505881 METRNQ9UJH8 293 aa8.51□□□□□ -1.05
CPNE4-205ENST00000505881 COLQQ9Y215 455 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-205ENST00000505881 SEC24BO95487 1268 aa8.5□□□□□ -1.05
CPNE4-205ENST00000505881 POTEFA5A3E0 1075 aa8.49□□□□□ -1.05
CPNE4-205ENST00000505881 MICALL2Q8IY33 904 aa8.49□□□□□ -1.05
CPNE4-205ENST00000505881 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
CPNE4-205ENST00000505881 IFT140Q96RY7 1462 aa8.47□□□□□ -1.05
CPNE4-205ENST00000505881 BOLA1Q9Y3E2 137 aa8.47□□□□□ -1.05
CPNE4-205ENST00000505881 NCKAP5LQ9HCH0 1330 aa8.47□□□□□ -1.05
CPNE4-205ENST00000505881 TMEM121BQ9BXQ6 578 aaPredicted RBP8.46□□□□□ -1.06
CPNE4-205ENST00000505881 CRISPLD2Q9H0B8 497 aa8.46□□□□□ -1.06
CPNE4-205ENST00000505881 LMTK3Q96Q04 1460 aa8.45□□□□□ -1.06
CPNE4-205ENST00000505881 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
CPNE4-205ENST00000505881 G3V3G9 751 aa8.44□□□□□ -1.06
CPNE4-205ENST00000505881 FBXO41Q8TF61 875 aa8.44□□□□□ -1.06
CPNE4-205ENST00000505881 L3MBTL3Q96JM7 780 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-205ENST00000505881 KIF13AQ9H1H9 1805 aa8.44□□□□□ -1.06
CPNE4-205ENST00000505881 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
CPNE4-205ENST00000505881 PDE4AP27815 886 aa8.42□□□□□ -1.06
CPNE4-205ENST00000505881 ERCC6L2Q5T890 1561 aa8.42□□□□□ -1.06
CPNE4-205ENST00000505881 AQRO60306 1485 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPNE4-205ENST00000505881 MFSD10Q14728 455 aa8.41□□□□□ -1.06
CPNE4-205ENST00000505881 LARP6Q9BRS8 491 aaKnown RBP8.41□□□□□ -1.06
CPNE4-205ENST00000505881 CLASP1Q7Z460 1538 aa8.4□□□□□ -1.06
CPNE4-205ENST00000505881 CFTRP13569 1480 aa8.4□□□□□ -1.06
CPNE4-205ENST00000505881 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
CPNE4-205ENST00000505881 HECW2Q9P2P5 1572 aa8.39□□□□□ -1.07
CPNE4-205ENST00000505881 SOCS7O14512 581 aa8.39□□□□□ -1.07
CPNE4-205ENST00000505881 DDX27Q96GQ7 796 aaKnown RBP8.39□□□□□ -1.07
CPNE4-205ENST00000505881 BCANQ96GW7 911 aa8.39□□□□□ -1.07
CPNE4-205ENST00000505881 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
CPNE4-205ENST00000505881 GAPVD1Q14C86 1478 aa8.38□□□□□ -1.07
CPNE4-205ENST00000505881 KCNV2Q8TDN2 545 aa8.38□□□□□ -1.07
CPNE4-205ENST00000505881 TMC2Q8TDI7 906 aa8.37□□□□□ -1.07
CPNE4-205ENST00000505881 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
CPNE4-205ENST00000505881 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
CPNE4-205ENST00000505881 ILDR2Q71H61 639 aa8.36□□□□□ -1.07
CPNE4-205ENST00000505881 WIZO95785 1651 aa8.36□□□□□ -1.07
CPNE4-205ENST00000505881 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
CPNE4-205ENST00000505881 PRDM2Q13029 1718 aa8.35□□□□□ -1.07
CPNE4-205ENST00000505881 C2orf72A6NCS6 295 aa8.35□□□□□ -1.07
CPNE4-205ENST00000505881 KIF3CO14782 793 aa8.35□□□□□ -1.07
CPNE4-205ENST00000505881 E2F4Q16254 413 aa8.35□□□□□ -1.07
CPNE4-205ENST00000505881 TMEM92Q6UXU6 159 aa8.35□□□□□ -1.07
CPNE4-205ENST00000505881 DSG2Q14126 1118 aa8.34□□□□□ -1.07
CPNE4-205ENST00000505881 TOPBP1Q92547 1522 aa8.34□□□□□ -1.08
CPNE4-205ENST00000505881 FOXK1P85037 733 aa8.33□□□□□ -1.08
CPNE4-205ENST00000505881 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
CPNE4-205ENST00000505881 NBR1Q14596 966 aa8.32□□□□□ -1.08
CPNE4-205ENST00000505881 ERICH6Q7L0X2 663 aa8.32□□□□□ -1.08
CPNE4-205ENST00000505881 KDM6BO15054 1643 aa8.32□□□□□ -1.08
CPNE4-205ENST00000505881 TARBP1Q13395 1621 aaKnown RBP8.32□□□□□ -1.08
CPNE4-205ENST00000505881 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
CPNE4-205ENST00000505881 POTEB2H3BUK9 544 aa8.3□□□□□ -1.08
CPNE4-205ENST00000505881 POTEJP0CG39 1038 aa8.3□□□□□ -1.08
CPNE4-205ENST00000505881 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
CPNE4-205ENST00000505881 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.3□□□□□ -1.08
CPNE4-205ENST00000505881 TSPOAP1O95153 1857 aa8.3□□□□□ -1.08
CPNE4-205ENST00000505881 PLPP6Q8IY26 295 aa8.29□□□□□ -1.08
CPNE4-205ENST00000505881 SNAPC4Q5SXM2 1469 aa8.29□□□□□ -1.08
CPNE4-205ENST00000505881 SYNJ2O15056 1496 aa8.28□□□□□ -1.08
CPNE4-205ENST00000505881 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
CPNE4-205ENST00000505881 FAM69CQ0P6D2 419 aa8.28□□□□□ -1.08
CPNE4-205ENST00000505881 DISP3Q9P2K9 1392 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms