RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 GCC2Q8IWJ2 1684 aa24.18■■□□□ 1.46
LIN54-204ENST00000505397 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
LIN54-204ENST00000505397 GPATCH8Q9UKJ3 1502 aaKnown RBP24.17■■□□□ 1.46
LIN54-204ENST00000505397 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
LIN54-204ENST00000505397 PPP1R15AO75807 674 aaPredicted RBP24.16■■□□□ 1.46
LIN54-204ENST00000505397 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
LIN54-204ENST00000505397 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
LIN54-204ENST00000505397 DAPK1P53355 1430 aa24.14■■□□□ 1.46
LIN54-204ENST00000505397 CDC42BPAQ5VT25 1732 aa24.14■■□□□ 1.46
LIN54-204ENST00000505397 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.46
LIN54-204ENST00000505397 SUPT16HQ9Y5B9 1047 aaKnown RBP24.13■■□□□ 1.45
LIN54-204ENST00000505397 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
LIN54-204ENST00000505397 ZNF644Q9H582 1327 aaPredicted RBP24.11■■□□□ 1.45
LIN54-204ENST00000505397 RRP7BPQ9NSQ0 103 aa24.11■■□□□ 1.45
LIN54-204ENST00000505397 KCNH8Q96L42 1107 aa24.09■■□□□ 1.45
LIN54-204ENST00000505397 ABCC5O15440 1437 aa24.08■■□□□ 1.45
LIN54-204ENST00000505397 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
LIN54-204ENST00000505397 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
LIN54-204ENST00000505397 ROCK1Q13464 1354 aa24.06■■□□□ 1.44
LIN54-204ENST00000505397 UHRF1BP1LA0JNW5 1464 aa24.06■■□□□ 1.44
LIN54-204ENST00000505397 ZCCHC11Q5TAX3 1644 aaKnown RBP24.03■■□□□ 1.44
LIN54-204ENST00000505397 CROCC2H7BZ55 1655 aa24.03■■□□□ 1.44
LIN54-204ENST00000505397 ADGBQ8N7X0 1667 aa24.03■■□□□ 1.44
LIN54-204ENST00000505397 PREX2Q70Z35 1606 aa24.01■■□□□ 1.43
LIN54-204ENST00000505397 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
LIN54-204ENST00000505397 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
LIN54-204ENST00000505397 KDM5BQ9UGL1 1544 aa23.99■■□□□ 1.43
LIN54-204ENST00000505397 KDM6BO15054 1643 aa23.98■■□□□ 1.43
LIN54-204ENST00000505397 CDC42BPBQ9Y5S2 1711 aa23.97■■□□□ 1.43
LIN54-204ENST00000505397 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
LIN54-204ENST00000505397 CCER2I3L3R5 266 aa23.95■■□□□ 1.42
LIN54-204ENST00000505397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.426e-13■■■■□ 25
LIN54-204ENST00000505397 TRIM52Q96A61 297 aa23.94■■□□□ 1.42
LIN54-204ENST00000505397 MYO5CQ9NQX4 1742 aa23.94■■□□□ 1.42
LIN54-204ENST00000505397 ADGRL2O95490 1459 aa23.92■■□□□ 1.42
LIN54-204ENST00000505397 SHANK2Q9UPX8 1470 aa23.91■■□□□ 1.42
LIN54-204ENST00000505397 ARHGAP5Q13017 1502 aa23.91■■□□□ 1.42
LIN54-204ENST00000505397 SAMD9LQ8IVG5 1584 aa23.9■■□□□ 1.42
LIN54-204ENST00000505397 MYT1Q01538 1121 aa23.9■■□□□ 1.42
LIN54-204ENST00000505397 HIRIP3Q9BW71 556 aaPredicted RBP23.9■■□□□ 1.42
LIN54-204ENST00000505397 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
LIN54-204ENST00000505397 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
LIN54-204ENST00000505397 NCOA1Q15788 1441 aa23.9■■□□□ 1.42
LIN54-204ENST00000505397 C9orf84Q5VXU9 1444 aa23.87■■□□□ 1.41
LIN54-204ENST00000505397 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
LIN54-204ENST00000505397 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
LIN54-204ENST00000505397 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
LIN54-204ENST00000505397 ANP32CO43423 234 aa23.85■■□□□ 1.41
LIN54-204ENST00000505397 CCDC141Q6ZP82 1450 aa23.84■■□□□ 1.41
LIN54-204ENST00000505397 HNRNPMP52272 730 aaKnown RBP eCLIP23.83■■□□□ 1.4
LIN54-204ENST00000505397 MBD5Q9P267 1494 aa23.82■■□□□ 1.4
LIN54-204ENST00000505397 SYCP2Q9BX26 1530 aa23.81■■□□□ 1.4
LIN54-204ENST00000505397 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
LIN54-204ENST00000505397 MPHOSPH9Q99550 1183 aa23.81■■□□□ 1.4
LIN54-204ENST00000505397 PLEKHH2Q8IVE3 1493 aa23.81■■□□□ 1.4
LIN54-204ENST00000505397 WDR7Q9Y4E6 1490 aa23.79■■□□□ 1.4
LIN54-204ENST00000505397 PLCH2O75038 1416 aa23.77■■□□□ 1.4
LIN54-204ENST00000505397 ANKRD50Q9ULJ7 1429 aa23.77■■□□□ 1.4
LIN54-204ENST00000505397 KIAA1107Q9UPP5 1409 aa23.74■■□□□ 1.39
LIN54-204ENST00000505397 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
LIN54-204ENST00000505397 EFCAB2Q5VUJ9 269 aa23.73■■□□□ 1.39
LIN54-204ENST00000505397 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
LIN54-204ENST00000505397 TSHZ2Q9NRE2 1034 aa23.72■■□□□ 1.39
LIN54-204ENST00000505397 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
LIN54-204ENST00000505397 ARAP3Q8WWN8 1544 aa23.71■■□□□ 1.39
LIN54-204ENST00000505397 NPM1P06748 294 aaKnown RBP eCLIP23.7■■□□□ 1.38
LIN54-204ENST00000505397 ASXL2Q76L83 1435 aa23.68■■□□□ 1.38
LIN54-204ENST00000505397 PZPP20742 1482 aa23.68■■□□□ 1.38
LIN54-204ENST00000505397 ABCC1P33527 1531 aa23.68■■□□□ 1.38
LIN54-204ENST00000505397 ABCA9Q8IUA7 1624 aa23.68■■□□□ 1.38
LIN54-204ENST00000505397 FKBP8Q14318 412 aa23.66■■□□□ 1.38
LIN54-204ENST00000505397 FOXD1Q16676 465 aa23.65■■□□□ 1.38
LIN54-204ENST00000505397 PLXNC1O60486 1568 aa23.64■■□□□ 1.38
LIN54-204ENST00000505397 HSPA5P11021 654 aaKnown RBP23.64■■□□□ 1.37
LIN54-204ENST00000505397 WASHC2AQ641Q2 1341 aa23.64■■□□□ 1.37
LIN54-204ENST00000505397 ARHGEF12Q9NZN5 1544 aa23.64■■□□□ 1.37
LIN54-204ENST00000505397 ANKRD30BQ9BXX2 1392 aa23.63■■□□□ 1.37
LIN54-204ENST00000505397 NUP155O75694 1391 aa23.61■■□□□ 1.37
LIN54-204ENST00000505397 KDM5DQ9BY66 1539 aa23.6■■□□□ 1.37
LIN54-204ENST00000505397 FANCAO15360 1455 aa23.59■■□□□ 1.37
LIN54-204ENST00000505397 RPRD2Q5VT52 1461 aaKnown RBP23.58■■□□□ 1.37
LIN54-204ENST00000505397 EIF4G2P78344 907 aaKnown RBP eCLIP23.58■■□□□ 1.36
LIN54-204ENST00000505397 L3MBTL2Q969R5 705 aa23.58■■□□□ 1.36
LIN54-204ENST00000505397 PKD2Q13563 968 aa23.55■■□□□ 1.36
LIN54-204ENST00000505397 BCANQ96GW7 911 aa23.55■■□□□ 1.36
LIN54-204ENST00000505397 TRAPPC8Q9Y2L5 1435 aa23.55■■□□□ 1.36
LIN54-204ENST00000505397 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
LIN54-204ENST00000505397 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
LIN54-204ENST00000505397 NEFLP07196 543 aa23.54■■□□□ 1.36
LIN54-204ENST00000505397 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
LIN54-204ENST00000505397 UNC13BO14795 1591 aa23.51■■□□□ 1.35
LIN54-204ENST00000505397 ADGRL1O94910 1474 aa23.5■■□□□ 1.35
LIN54-204ENST00000505397 ERBINQ96RT1 1412 aa23.5■■□□□ 1.35
LIN54-204ENST00000505397 SPAG9O60271 1321 aaKnown RBP23.5■■□□□ 1.35
LIN54-204ENST00000505397 FAM135AQ9P2D6 1515 aa23.49■■□□□ 1.35
LIN54-204ENST00000505397 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
LIN54-204ENST00000505397 RTEL1-TNFRSF6BF6WH68 1400 aa23.48■■□□□ 1.35
LIN54-204ENST00000505397 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
LIN54-204ENST00000505397 SPATA31E1Q6ZUB1 1445 aa23.46■■□□□ 1.35
LIN54-204ENST00000505397 CFAP74Q9C0B2 1584 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms