RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ATP10BO94823 1461 aa10.51□□□□□ -0.73
GYPB-204ENST00000504951 POLA2Q14181 598 aa10.51□□□□□ -0.73
GYPB-204ENST00000504951 RAPGEF3O95398 923 aa10.5□□□□□ -0.73
GYPB-204ENST00000504951 FHOD3Q2V2M9 1422 aa10.48□□□□□ -0.73
GYPB-204ENST00000504951 MADDQ8WXG6 1647 aa10.47□□□□□ -0.73
GYPB-204ENST00000504951 POGZQ7Z3K3 1410 aa10.46□□□□□ -0.74
GYPB-204ENST00000504951 MAGI2Q86UL8 1455 aa10.45□□□□□ -0.74
GYPB-204ENST00000504951 ARID4BQ4LE39 1312 aaPredicted RBP10.45□□□□□ -0.74
GYPB-204ENST00000504951 ILDR2Q71H61 639 aa10.45□□□□□ -0.74
GYPB-204ENST00000504951 CTTNBP2Q8WZ74 1663 aa10.44□□□□□ -0.74
GYPB-204ENST00000504951 FRMPD1Q5SYB0 1578 aa10.44□□□□□ -0.74
GYPB-204ENST00000504951 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
GYPB-204ENST00000504951 SLC4A1APQ9BWU0 796 aaKnown RBP10.44□□□□□ -0.74
GYPB-204ENST00000504951 DENND4BO75064 1496 aaPredicted RBP10.43□□□□□ -0.74
GYPB-204ENST00000504951 HSPA2P54652 639 aa10.43□□□□□ -0.74
GYPB-204ENST00000504951 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
GYPB-204ENST00000504951 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
GYPB-204ENST00000504951 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
GYPB-204ENST00000504951 YEATS2Q9ULM3 1422 aa10.42□□□□□ -0.74
GYPB-204ENST00000504951 DISP3Q9P2K9 1392 aa10.42□□□□□ -0.74
GYPB-204ENST00000504951 FANCAO15360 1455 aa10.42□□□□□ -0.74
GYPB-204ENST00000504951 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
GYPB-204ENST00000504951 ZMYM4Q5VZL5 1548 aa10.41□□□□□ -0.74
GYPB-204ENST00000504951 RIMS1Q86UR5 1692 aaKnown RBP10.4□□□□□ -0.74
GYPB-204ENST00000504951 RICTORQ6R327 1708 aa10.39□□□□□ -0.75
GYPB-204ENST00000504951 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
GYPB-204ENST00000504951 SETD1BQ9UPS6 1966 aaKnown RBP10.38□□□□□ -0.75
GYPB-204ENST00000504951 PLEKHD1A6NEE1 506 aa10.38□□□□□ -0.75
GYPB-204ENST00000504951 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
GYPB-204ENST00000504951 TTC37Q6PGP7 1564 aa10.38□□□□□ -0.75
GYPB-204ENST00000504951 EFCAB5A4FU69 1503 aa10.38□□□□□ -0.75
GYPB-204ENST00000504951 PTPRTO14522 1441 aa10.37□□□□□ -0.75
GYPB-204ENST00000504951 CFAP74Q9C0B2 1584 aa10.36□□□□□ -0.75
GYPB-204ENST00000504951 ARHGEF12Q9NZN5 1544 aa10.36□□□□□ -0.75
GYPB-204ENST00000504951 SAMD9Q5K651 1589 aa10.35□□□□□ -0.75
GYPB-204ENST00000504951 RAPGEF6Q8TEU7 1601 aa10.35□□□□□ -0.75
GYPB-204ENST00000504951 NUP153P49790 1475 aaKnown RBP10.35□□□□□ -0.75
GYPB-204ENST00000504951 ZFYVE16Q7Z3T8 1539 aa10.34□□□□□ -0.75
GYPB-204ENST00000504951 ATP10AO60312 1499 aa10.34□□□□□ -0.75
GYPB-204ENST00000504951 STRCQ7RTU9 1775 aa10.32□□□□□ -0.76
GYPB-204ENST00000504951 PREX1Q8TCU6 1659 aa10.32□□□□□ -0.76
GYPB-204ENST00000504951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.32□□□□□ -0.76
GYPB-204ENST00000504951 PLCH2O75038 1416 aa10.32□□□□□ -0.76
GYPB-204ENST00000504951 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
GYPB-204ENST00000504951 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
GYPB-204ENST00000504951 ARID3CA6NKF2 412 aa10.3□□□□□ -0.76
GYPB-204ENST00000504951 C9orf84Q5VXU9 1444 aa10.3□□□□□ -0.76
GYPB-204ENST00000504951 UHRF1BP1Q6BDS2 1440 aa10.3□□□□□ -0.76
GYPB-204ENST00000504951 SIGLEC1Q9BZZ2 1709 aa10.3□□□□□ -0.76
GYPB-204ENST00000504951 HECW1Q76N89 1606 aa10.29□□□□□ -0.76
GYPB-204ENST00000504951 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
GYPB-204ENST00000504951 FER1L4A9Z1Z3 1794 aa10.29□□□□□ -0.76
GYPB-204ENST00000504951 SCAPERQ9BY12 1400 aa10.29□□□□□ -0.76
GYPB-204ENST00000504951 SPATA31D1Q6ZQQ2 1576 aa10.29□□□□□ -0.76
GYPB-204ENST00000504951 MLECQ14165 292 aa10.27□□□□□ -0.77
GYPB-204ENST00000504951 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.77
GYPB-204ENST00000504951 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
GYPB-204ENST00000504951 REREQ9P2R6 1566 aa10.26□□□□□ -0.77
GYPB-204ENST00000504951 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
GYPB-204ENST00000504951 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
GYPB-204ENST00000504951 TRAPPC8Q9Y2L5 1435 aa10.25□□□□□ -0.77
GYPB-204ENST00000504951 ZNF518AQ6AHZ1 1483 aa10.23□□□□□ -0.77
GYPB-204ENST00000504951 AGLP35573 1532 aa10.23□□□□□ -0.77
GYPB-204ENST00000504951 NCOA1Q15788 1441 aa10.23□□□□□ -0.77
GYPB-204ENST00000504951 CNTLNQ9NXG0 1405 aa10.22□□□□□ -0.77
GYPB-204ENST00000504951 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
GYPB-204ENST00000504951 KDM5CP41229 1560 aa10.22□□□□□ -0.77
GYPB-204ENST00000504951 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
GYPB-204ENST00000504951 NPATQ14207 1427 aa10.21□□□□□ -0.78
GYPB-204ENST00000504951 EEA1Q15075 1411 aa10.19□□□□□ -0.78
GYPB-204ENST00000504951 PKD2Q13563 968 aa10.19□□□□□ -0.78
GYPB-204ENST00000504951 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
GYPB-204ENST00000504951 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
GYPB-204ENST00000504951 C3P01024 1663 aa10.17□□□□□ -0.78
GYPB-204ENST00000504951 PLA2R1Q13018 1463 aa10.17□□□□□ -0.78
GYPB-204ENST00000504951 REM2Q8IYK8 340 aaPredicted RBP10.16□□□□□ -0.78
GYPB-204ENST00000504951 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
GYPB-204ENST00000504951 DIP2CQ9Y2E4 1556 aa10.16□□□□□ -0.78
GYPB-204ENST00000504951 UBAP1LF5GYI3 381 aa10.15□□□□□ -0.78
GYPB-204ENST00000504951 MYO5CQ9NQX4 1742 aa10.14□□□□□ -0.79
GYPB-204ENST00000504951 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
GYPB-204ENST00000504951 FMN1Q68DA7 1419 aa10.14□□□□□ -0.79
GYPB-204ENST00000504951 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
GYPB-204ENST00000504951 TCOF1Q13428 1488 aaKnown RBP10.13□□□□□ -0.79
GYPB-204ENST00000504951 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
GYPB-204ENST00000504951 CAMSAP1Q5T5Y3 1602 aa10.12□□□□□ -0.79
GYPB-204ENST00000504951 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
GYPB-204ENST00000504951 ZNF335Q9H4Z2 1342 aaPredicted RBP10.11□□□□□ -0.79
GYPB-204ENST00000504951 TOM1O60784 492 aa10.1□□□□□ -0.79
GYPB-204ENST00000504951 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
GYPB-204ENST00000504951 CLIP1P30622 1438 aa10.09□□□□□ -0.79
GYPB-204ENST00000504951 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
GYPB-204ENST00000504951 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
GYPB-204ENST00000504951 KIF14Q15058 1648 aa10.08□□□□□ -0.8
GYPB-204ENST00000504951 ZBTB22O15209 634 aa10.08□□□□□ -0.8
GYPB-204ENST00000504951 SP7Q8TDD2 431 aaPredicted RBP10.08□□□□□ -0.8
GYPB-204ENST00000504951 HSPA1LP34931 641 aa10.07□□□□□ -0.8
GYPB-204ENST00000504951 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
GYPB-204ENST00000504951 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
GYPB-204ENST00000504951 CPS1P31327 1500 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms