RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 HECW1Q76N89 1606 aa23.54■■□□□ 1.36
PAAF1-204ENST00000504441 MAGI2Q86UL8 1455 aa23.51■■□□□ 1.35
PAAF1-204ENST00000504441 PLCH2O75038 1416 aa23.5■■□□□ 1.35
PAAF1-204ENST00000504441 FER1L4A9Z1Z3 1794 aa23.49■■□□□ 1.35
PAAF1-204ENST00000504441 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
PAAF1-204ENST00000504441 EFCAB2Q5VUJ9 269 aa23.45■■□□□ 1.34
PAAF1-204ENST00000504441 ATP10AO60312 1499 aa23.44■■□□□ 1.34
PAAF1-204ENST00000504441 CERKQ8TCT0 537 aa23.44■■□□□ 1.34
PAAF1-204ENST00000504441 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
PAAF1-204ENST00000504441 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
PAAF1-204ENST00000504441 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
PAAF1-204ENST00000504441 MYO5CQ9NQX4 1742 aa23.41■■□□□ 1.34
PAAF1-204ENST00000504441 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
PAAF1-204ENST00000504441 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
PAAF1-204ENST00000504441 ARHGEF12Q9NZN5 1544 aa23.39■■□□□ 1.34
PAAF1-204ENST00000504441 KIF14Q15058 1648 aa23.38■■□□□ 1.33
PAAF1-204ENST00000504441 AFAP1Q8N556 730 aa23.37■■□□□ 1.33
PAAF1-204ENST00000504441 ARHGAP5Q13017 1502 aa23.36■■□□□ 1.33
PAAF1-204ENST00000504441 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
PAAF1-204ENST00000504441 ZNF518AQ6AHZ1 1483 aa23.34■■□□□ 1.33
PAAF1-204ENST00000504441 PREX1Q8TCU6 1659 aa23.34■■□□□ 1.33
PAAF1-204ENST00000504441 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
PAAF1-204ENST00000504441 CLIP1P30622 1438 aa23.31■■□□□ 1.32
PAAF1-204ENST00000504441 KDM5CP41229 1560 aa23.27■■□□□ 1.32
PAAF1-204ENST00000504441 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
PAAF1-204ENST00000504441 DMRT2Q9Y5R5 561 aa23.26■■□□□ 1.31
PAAF1-204ENST00000504441 DIP2CQ9Y2E4 1556 aa23.25■■□□□ 1.31
PAAF1-204ENST00000504441 ESF1Q9H501 851 aaKnown RBP23.24■■□□□ 1.31
PAAF1-204ENST00000504441 LRRIQ1Q96JM4 1722 aa23.23■■□□□ 1.31
PAAF1-204ENST00000504441 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
PAAF1-204ENST00000504441 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
PAAF1-204ENST00000504441 CDC42BPBQ9Y5S2 1711 aa23.21■■□□□ 1.31
PAAF1-204ENST00000504441 TRAPPC8Q9Y2L5 1435 aa23.19■■□□□ 1.3
PAAF1-204ENST00000504441 MLH3Q9UHC1 1453 aa23.18■■□□□ 1.3
PAAF1-204ENST00000504441 C3P01024 1663 aa23.17■■□□□ 1.3
PAAF1-204ENST00000504441 REREQ9P2R6 1566 aa23.17■■□□□ 1.3
PAAF1-204ENST00000504441 DISP3Q9P2K9 1392 aa23.16■■□□□ 1.3
PAAF1-204ENST00000504441 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
PAAF1-204ENST00000504441 ABCC1P33527 1531 aa23.16■■□□□ 1.3
PAAF1-204ENST00000504441 SETD1BQ9UPS6 1966 aaKnown RBP23.13■■□□□ 1.29
PAAF1-204ENST00000504441 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
PAAF1-204ENST00000504441 ITSN2Q9NZM3 1697 aa23.13■■□□□ 1.29
PAAF1-204ENST00000504441 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
PAAF1-204ENST00000504441 AGLP35573 1532 aa23.12■■□□□ 1.29
PAAF1-204ENST00000504441 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
PAAF1-204ENST00000504441 CASKIN1Q8WXD9 1431 aa23.1■■□□□ 1.29
PAAF1-204ENST00000504441 ILDR2Q71H61 639 aa23.1■■□□□ 1.29
PAAF1-204ENST00000504441 PTPRTO14522 1441 aa23.09■■□□□ 1.29
PAAF1-204ENST00000504441 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
PAAF1-204ENST00000504441 CDC42BPAQ5VT25 1732 aa23.06■■□□□ 1.28
PAAF1-204ENST00000504441 CNTLNQ9NXG0 1405 aa23.06■■□□□ 1.28
PAAF1-204ENST00000504441 SAMD9LQ8IVG5 1584 aa23.02■■□□□ 1.28
PAAF1-204ENST00000504441 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
PAAF1-204ENST00000504441 HNRNPMP52272 730 aaKnown RBP eCLIP23.02■■□□□ 1.28
PAAF1-204ENST00000504441 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
PAAF1-204ENST00000504441 SYCP2Q9BX26 1530 aa23.02■■□□□ 1.28
PAAF1-204ENST00000504441 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
PAAF1-204ENST00000504441 ZMYM3Q14202 1370 aa23■■□□□ 1.27
PAAF1-204ENST00000504441 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
PAAF1-204ENST00000504441 CAMSAP1Q5T5Y3 1602 aa22.99■■□□□ 1.27
PAAF1-204ENST00000504441 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
PAAF1-204ENST00000504441 SOCS7O14512 581 aa22.97■■□□□ 1.27
PAAF1-204ENST00000504441 NCKAP5LQ9HCH0 1330 aa22.97■■□□□ 1.27
PAAF1-204ENST00000504441 NPATQ14207 1427 aa22.97■■□□□ 1.27
PAAF1-204ENST00000504441 GPATCH8Q9UKJ3 1502 aaKnown RBP22.97■■□□□ 1.27
PAAF1-204ENST00000504441 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
PAAF1-204ENST00000504441 MROH2AA6NES4 1674 aa22.95■■□□□ 1.26
PAAF1-204ENST00000504441 CFDP1Q9UEE9 299 aaPredicted RBP22.95■■□□□ 1.26
PAAF1-204ENST00000504441 ATP7AQ04656 1500 aa22.94■■□□□ 1.26
PAAF1-204ENST00000504441 GGT6Q6P531 493 aa22.93■■□□□ 1.26
PAAF1-204ENST00000504441 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
PAAF1-204ENST00000504441 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
PAAF1-204ENST00000504441 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
PAAF1-204ENST00000504441 IQSEC2Q5JU85 1478 aa22.91■■□□□ 1.26
PAAF1-204ENST00000504441 A2MP01023 1474 aa22.9■■□□□ 1.26
PAAF1-204ENST00000504441 PLEKHH2Q8IVE3 1493 aa22.88■■□□□ 1.25
PAAF1-204ENST00000504441 MYO3AQ8NEV4 1616 aa22.88■■□□□ 1.25
PAAF1-204ENST00000504441 KIAA1107Q9UPP5 1409 aa22.88■■□□□ 1.25
PAAF1-204ENST00000504441 INO80Q9ULG1 1556 aaPredicted RBP22.88■■□□□ 1.25
PAAF1-204ENST00000504441 UBAP1LF5GYI3 381 aa22.87■■□□□ 1.25
PAAF1-204ENST00000504441 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
PAAF1-204ENST00000504441 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
PAAF1-204ENST00000504441 PTPRKQ15262 1439 aa22.85■■□□□ 1.25
PAAF1-204ENST00000504441 CEP170BQ9Y4F5 1589 aaPredicted RBP22.84■■□□□ 1.25
PAAF1-204ENST00000504441 PKD2Q13563 968 aa22.84■■□□□ 1.25
PAAF1-204ENST00000504441 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.25
PAAF1-204ENST00000504441 ZNF142P52746 1687 aaPredicted RBP22.83■■□□□ 1.24
PAAF1-204ENST00000504441 PLA2R1Q13018 1463 aa22.81■■□□□ 1.24
PAAF1-204ENST00000504441 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
PAAF1-204ENST00000504441 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
PAAF1-204ENST00000504441 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
PAAF1-204ENST00000504441 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
PAAF1-204ENST00000504441 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
PAAF1-204ENST00000504441 A2ML1A8K2U0 1454 aa22.73■■□□□ 1.23
PAAF1-204ENST00000504441 MBD5Q9P267 1494 aa22.73■■□□□ 1.23
PAAF1-204ENST00000504441 FBXO31Q5XUX0 539 aaPredicted RBP22.72■■□□□ 1.23
PAAF1-204ENST00000504441 KIF3BO15066 747 aa22.71■■□□□ 1.23
PAAF1-204ENST00000504441 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
PAAF1-204ENST00000504441 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
PAAF1-204ENST00000504441 DHX29Q7Z478 1369 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms