RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 DIAPH3Q9NSV4 1193 aa7.65□□□□□ -1.18
LINC02397-201ENST00000504409 SCAPERQ9BY12 1400 aa7.65□□□□□ -1.18
LINC02397-201ENST00000504409 ACBD3Q9H3P7 528 aa7.65□□□□□ -1.18
LINC02397-201ENST00000504409 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
LINC02397-201ENST00000504409 MCM5P33992 734 aa7.65□□□□□ -1.18
LINC02397-201ENST00000504409 CCDC18Q5T9S5 1454 aa7.65□□□□□ -1.19
LINC02397-201ENST00000504409 HMGB1P1B2RPK0 211 aaPredicted RBP7.65□□□□□ -1.19
LINC02397-201ENST00000504409 CCDC34Q96HJ3 373 aa7.65□□□□□ -1.19
LINC02397-201ENST00000504409 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 MCCP23508 829 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 MRE11P49959 708 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 PDCL3Q9H2J4 239 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 ATP6V1DQ9Y5K8 247 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 CUX1P39880 1505 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 RALBP1Q15311 655 aa7.64□□□□□ -1.19
LINC02397-201ENST00000504409 CCP110O43303 1012 aa7.63□□□□□ -1.19
LINC02397-201ENST00000504409 KLHL34Q8N239 644 aa7.63□□□□□ -1.19
LINC02397-201ENST00000504409 WDR43Q15061 677 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC02397-201ENST00000504409 TAF7LQ5H9L4 462 aa7.63□□□□□ -1.19
LINC02397-201ENST00000504409 TPM4P67936 248 aa7.63□□□□□ -1.19
LINC02397-201ENST00000504409 FAM50AQ14320 339 aaKnown RBP7.63□□□□□ -1.19
LINC02397-201ENST00000504409 ARGLU1Q9NWB6 273 aaPredicted RBP7.63□□□□□ -1.19
LINC02397-201ENST00000504409 APPP05067 770 aa7.62□□□□□ -1.19
LINC02397-201ENST00000504409 TERF1P54274 439 aa7.62□□□□□ -1.19
LINC02397-201ENST00000504409 C11orf95C9JLR9 678 aaPredicted RBP7.61□□□□□ -1.19
LINC02397-201ENST00000504409 CALD1Q05682 793 aaKnown RBP7.61□□□□□ -1.19
LINC02397-201ENST00000504409 ATAD2Q6PL18 1390 aa7.61□□□□□ -1.19
LINC02397-201ENST00000504409 LETM1O95202 739 aaPredicted RBP7.61□□□□□ -1.19
LINC02397-201ENST00000504409 POLR3GO15318 223 aaPredicted RBP7.61□□□□□ -1.19
LINC02397-201ENST00000504409 VSIG10Q8N0Z9 540 aa7.61□□□□□ -1.19
LINC02397-201ENST00000504409 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
LINC02397-201ENST00000504409 CENPQQ7L2Z9 268 aaPredicted RBP7.6□□□□□ -1.19
LINC02397-201ENST00000504409 SETD5Q9C0A6 1442 aa7.6□□□□□ -1.19
LINC02397-201ENST00000504409 HSP90B1P14625 803 aaKnown RBP7.59□□□□□ -1.19
LINC02397-201ENST00000504409 CNTLNQ9NXG0 1405 aa7.59□□□□□ -1.19
LINC02397-201ENST00000504409 CCDC173Q0VFZ6 552 aa7.59□□□□□ -1.19
LINC02397-201ENST00000504409 ERICH3Q5RHP9 1530 aa7.59□□□□□ -1.19
LINC02397-201ENST00000504409 RBM28Q9NW13 759 aaKnown RBP7.59□□□□□ -1.19
LINC02397-201ENST00000504409 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.2
LINC02397-201ENST00000504409 CAGE1Q8TC20 777 aa7.58□□□□□ -1.2
LINC02397-201ENST00000504409 ARHGAP35Q9NRY4 1499 aa7.58□□□□□ -1.2
LINC02397-201ENST00000504409 KIF2AO00139 706 aaPredicted RBP7.58□□□□□ -1.2
LINC02397-201ENST00000504409 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
LINC02397-201ENST00000504409 MNS1Q8NEH6 495 aa7.58□□□□□ -1.2
LINC02397-201ENST00000504409 ATP1B4Q9UN42 357 aaPredicted RBP7.58□□□□□ -1.2
LINC02397-201ENST00000504409 DHX29Q7Z478 1369 aaKnown RBP7.57□□□□□ -1.2
LINC02397-201ENST00000504409 MTUS2Q5JR59 1369 aa7.57□□□□□ -1.2
LINC02397-201ENST00000504409 HS1BP3Q53T59 392 aa7.57□□□□□ -1.2
LINC02397-201ENST00000504409 ERCC4Q92889 916 aaPredicted RBP7.57□□□□□ -1.2
LINC02397-201ENST00000504409 TPM1P09493 284 aa7.57□□□□□ -1.2
LINC02397-201ENST00000504409 TUBB4BP68371 445 aa7.57□□□□□ -1.2
LINC02397-201ENST00000504409 DNAJC2Q99543 621 aaKnown RBP7.57□□□□□ -1.2
LINC02397-201ENST00000504409 SSR1P43307 286 aaKnown RBP7.57□□□□□ -1.2
LINC02397-201ENST00000504409 TUBB4AP04350 444 aa7.57□□□□□ -1.2
LINC02397-201ENST00000504409 CDR1P51861 262 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 CALCOCO1Q9P1Z2 691 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
LINC02397-201ENST00000504409 NUDCQ9Y266 331 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 KIF7Q2M1P5 1343 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 KIF27Q86VH2 1401 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 MIA2Q96PC5 1412 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 FAM161AQ3B820 660 aa7.56□□□□□ -1.2
LINC02397-201ENST00000504409 AKNAQ7Z591 1439 aa7.55□□□□□ -1.2
LINC02397-201ENST00000504409 FAM184AQ8NB25 1140 aa7.55□□□□□ -1.2
LINC02397-201ENST00000504409 KIF20AO95235 890 aa7.55□□□□□ -1.2
LINC02397-201ENST00000504409 GTPBP4Q9BZE4 634 aaKnown RBP7.55□□□□□ -1.2
LINC02397-201ENST00000504409 SH3BGRP55822 239 aaPredicted RBP7.55□□□□□ -1.2
LINC02397-201ENST00000504409 HDAC5Q9UQL6 1122 aa7.55□□□□□ -1.2
LINC02397-201ENST00000504409 CFAP53Q96M91 514 aa7.54□□□□□ -1.2
LINC02397-201ENST00000504409 CIZ1Q9ULV3 898 aaPredicted RBP7.54□□□□□ -1.2
LINC02397-201ENST00000504409 SCRIBQ14160 1630 aa7.54□□□□□ -1.2
LINC02397-201ENST00000504409 TOP2AP11388 1531 aaKnown RBP7.54□□□□□ -1.2
LINC02397-201ENST00000504409 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
LINC02397-201ENST00000504409 AK7Q96M32 723 aa7.54□□□□□ -1.2
LINC02397-201ENST00000504409 ZMYM3Q14202 1370 aa7.54□□□□□ -1.2
LINC02397-201ENST00000504409 TRIM52Q96A61 297 aa7.54□□□□□ -1.2
LINC02397-201ENST00000504409 MAP3K1Q13233 1512 aa7.54□□□□□ -1.2
LINC02397-201ENST00000504409 CGNL1Q0VF96 1302 aa7.53□□□□□ -1.2
LINC02397-201ENST00000504409 HMMRO75330 724 aa7.53□□□□□ -1.2
LINC02397-201ENST00000504409 DDX10Q13206 875 aaKnown RBP7.53□□□□□ -1.2
LINC02397-201ENST00000504409 RWDD1Q9H446 243 aaPredicted RBP7.53□□□□□ -1.2
LINC02397-201ENST00000504409 DCTN1Q14203 1278 aa7.53□□□□□ -1.2
LINC02397-201ENST00000504409 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
LINC02397-201ENST00000504409 WASHC2CQ9Y4E1 1318 aa7.53□□□□□ -1.2
LINC02397-201ENST00000504409 NCBP3Q53F19 620 aaKnown RBP7.53□□□□□ -1.2
LINC02397-201ENST00000504409 SMARCA2P51531 1590 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 FMN1Q68DA7 1419 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.21
LINC02397-201ENST00000504409 DYNC1I1O14576 645 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 IPO8O15397 1037 aaKnown RBP7.52□□□□□ -1.21
LINC02397-201ENST00000504409 MBD3O95983 291 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 KIF15Q9NS87 1388 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 CLGNO14967 610 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 DEF6Q9H4E7 631 aa7.52□□□□□ -1.21
LINC02397-201ENST00000504409 NUCB2P80303 420 aa7.51□□□□□ -1.21
LINC02397-201ENST00000504409 ZNF771Q7L3S4 317 aaPredicted RBP7.51□□□□□ -1.21
LINC02397-201ENST00000504409 STAC3Q96MF2 364 aa7.51□□□□□ -1.21
LINC02397-201ENST00000504409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC02397-201ENST00000504409 ST18O60284 1047 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 RDXP35241 583 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms