RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 UHRF1BP1LA0JNW5 1464 aa14.18□□□□□ -0.14
COL1A1-210ENST00000504289 ADGRL2O95490 1459 aa14.18□□□□□ -0.14
COL1A1-210ENST00000504289 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
COL1A1-210ENST00000504289 SHANK2Q9UPX8 1470 aa14.17□□□□□ -0.14
COL1A1-210ENST00000504289 ABCC2Q92887 1545 aa14.16□□□□□ -0.14
COL1A1-210ENST00000504289 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
COL1A1-210ENST00000504289 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
COL1A1-210ENST00000504289 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
COL1A1-210ENST00000504289 ARID3CA6NKF2 412 aa14.15□□□□□ -0.14
COL1A1-210ENST00000504289 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
COL1A1-210ENST00000504289 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
COL1A1-210ENST00000504289 CDC42BPAQ5VT25 1732 aa14.12□□□□□ -0.15
COL1A1-210ENST00000504289 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
COL1A1-210ENST00000504289 RRP7BPQ9NSQ0 103 aa14.12□□□□□ -0.15
COL1A1-210ENST00000504289 NCOA1Q15788 1441 aa14.12□□□□□ -0.15
COL1A1-210ENST00000504289 ARHGEF5Q12774 1597 aa14.12□□□□□ -0.15
COL1A1-210ENST00000504289 ANKRD30AQ9BXX3 1397 aa14.11□□□□□ -0.15
COL1A1-210ENST00000504289 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-210ENST00000504289 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
COL1A1-210ENST00000504289 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-210ENST00000504289 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
COL1A1-210ENST00000504289 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
COL1A1-210ENST00000504289 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
COL1A1-210ENST00000504289 KDM5BQ9UGL1 1544 aa14.08□□□□□ -0.16
COL1A1-210ENST00000504289 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
COL1A1-210ENST00000504289 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
COL1A1-210ENST00000504289 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
COL1A1-210ENST00000504289 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
COL1A1-210ENST00000504289 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
COL1A1-210ENST00000504289 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
COL1A1-210ENST00000504289 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
COL1A1-210ENST00000504289 KDM6BO15054 1643 aa14.04□□□□□ -0.16
COL1A1-210ENST00000504289 DENND4BO75064 1496 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-210ENST00000504289 MBD5Q9P267 1494 aa14.04□□□□□ -0.16
COL1A1-210ENST00000504289 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
COL1A1-210ENST00000504289 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
COL1A1-210ENST00000504289 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
COL1A1-210ENST00000504289 ARAP3Q8WWN8 1544 aa14.03□□□□□ -0.16
COL1A1-210ENST00000504289 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
COL1A1-210ENST00000504289 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.17
COL1A1-210ENST00000504289 CDC42BPBQ9Y5S2 1711 aa14.01□□□□□ -0.17
COL1A1-210ENST00000504289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL1A1-210ENST00000504289 ANKRD50Q9ULJ7 1429 aa14.01□□□□□ -0.17
COL1A1-210ENST00000504289 ZNF777Q9ULD5 760 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-210ENST00000504289 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
COL1A1-210ENST00000504289 ZCCHC11Q5TAX3 1644 aaKnown RBP14□□□□□ -0.17
COL1A1-210ENST00000504289 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
COL1A1-210ENST00000504289 CENPBP07199 599 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-210ENST00000504289 SAMD9LQ8IVG5 1584 aa13.99□□□□□ -0.17
COL1A1-210ENST00000504289 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
COL1A1-210ENST00000504289 PLCH2O75038 1416 aa13.98□□□□□ -0.17
COL1A1-210ENST00000504289 PZPP20742 1482 aa13.98□□□□□ -0.17
COL1A1-210ENST00000504289 TTC37Q6PGP7 1564 aa13.97□□□□□ -0.17
COL1A1-210ENST00000504289 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
COL1A1-210ENST00000504289 ARHGAP5Q13017 1502 aa13.96□□□□□ -0.17
COL1A1-210ENST00000504289 EFCAB2Q5VUJ9 269 aa13.96□□□□□ -0.17
COL1A1-210ENST00000504289 MIER1Q8N108 512 aa13.95□□□□□ -0.18
COL1A1-210ENST00000504289 KIF15Q9NS87 1388 aa13.95□□□□□ -0.18
COL1A1-210ENST00000504289 PLXNC1O60486 1568 aa13.94□□□□□ -0.18
COL1A1-210ENST00000504289 CYB5RLQ6IPT4 315 aa13.93□□□□□ -0.18
COL1A1-210ENST00000504289 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL1A1-210ENST00000504289 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
COL1A1-210ENST00000504289 SYCP2Q9BX26 1530 aa13.9□□□□□ -0.18
COL1A1-210ENST00000504289 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.19
COL1A1-210ENST00000504289 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
COL1A1-210ENST00000504289 NUP155O75694 1391 aa13.89□□□□□ -0.19
COL1A1-210ENST00000504289 DUOX2Q9NRD8 1548 aa13.89□□□□□ -0.19
COL1A1-210ENST00000504289 ABCC1P33527 1531 aa13.88□□□□□ -0.19
COL1A1-210ENST00000504289 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
COL1A1-210ENST00000504289 ABCA9Q8IUA7 1624 aa13.87□□□□□ -0.19
COL1A1-210ENST00000504289 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
COL1A1-210ENST00000504289 UNC13BO14795 1591 aa13.87□□□□□ -0.19
COL1A1-210ENST00000504289 PKD2Q13563 968 aa13.86□□□□□ -0.19
COL1A1-210ENST00000504289 KCNH8Q96L42 1107 aa13.86□□□□□ -0.19
COL1A1-210ENST00000504289 ARHGEF12Q9NZN5 1544 aa13.85□□□□□ -0.19
COL1A1-210ENST00000504289 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL1A1-210ENST00000504289 MAGI2Q86UL8 1455 aa13.83□□□□□ -0.2
COL1A1-210ENST00000504289 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
COL1A1-210ENST00000504289 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL1A1-210ENST00000504289 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
COL1A1-210ENST00000504289 ATP10AO60312 1499 aa13.81□□□□□ -0.2
COL1A1-210ENST00000504289 FOXD1Q16676 465 aa13.81□□□□□ -0.2
COL1A1-210ENST00000504289 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
COL1A1-210ENST00000504289 ASXL2Q76L83 1435 aa13.81□□□□□ -0.2
COL1A1-210ENST00000504289 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-210ENST00000504289 FANCAO15360 1455 aa13.79□□□□□ -0.2
COL1A1-210ENST00000504289 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
COL1A1-210ENST00000504289 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
COL1A1-210ENST00000504289 DDX10Q13206 875 aaKnown RBP13.77□□□□□ -0.21
COL1A1-210ENST00000504289 CFAP74Q9C0B2 1584 aa13.77□□□□□ -0.21
COL1A1-210ENST00000504289 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.21
COL1A1-210ENST00000504289 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
COL1A1-210ENST00000504289 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-210ENST00000504289 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
COL1A1-210ENST00000504289 ZFYVE16Q7Z3T8 1539 aa13.75□□□□□ -0.21
COL1A1-210ENST00000504289 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-210ENST00000504289 ANP32CO43423 234 aa13.74□□□□□ -0.21
COL1A1-210ENST00000504289 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
COL1A1-210ENST00000504289 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
COL1A1-210ENST00000504289 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms