RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SUPT6HQ7KZ85 1726 aaKnown RBP7.26□□□□□ -1.25
CLDND1-208ENST00000503004 RBM19Q9Y4C8 960 aaKnown RBP7.25□□□□□ -1.25
CLDND1-208ENST00000503004 UACAQ9BZF9 1416 aa7.25□□□□□ -1.25
CLDND1-208ENST00000503004 EPRSP07814 1512 aaKnown RBP7.25□□□□□ -1.25
CLDND1-208ENST00000503004 ADAMTS12P58397 1594 aa7.25□□□□□ -1.25
CLDND1-208ENST00000503004 PTPN23Q9H3S7 1636 aa7.25□□□□□ -1.25
CLDND1-208ENST00000503004 UGGT2Q9NYU1 1516 aa7.25□□□□□ -1.25
CLDND1-208ENST00000503004 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.25□□□□□ -1.25
CLDND1-208ENST00000503004 THOC2Q8NI27 1593 aaKnown RBP7.24□□□□□ -1.25
CLDND1-208ENST00000503004 PODXL2Q9NZ53 605 aa7.24□□□□□ -1.25
CLDND1-208ENST00000503004 TRIM52Q96A61 297 aa7.23□□□□□ -1.25
CLDND1-208ENST00000503004 FBLN2P98095 1184 aa7.23□□□□□ -1.25
CLDND1-208ENST00000503004 ERICH6BQ5W0A0 696 aa7.23□□□□□ -1.25
CLDND1-208ENST00000503004 ARHGEF11O15085 1522 aa7.23□□□□□ -1.25
CLDND1-208ENST00000503004 FKBP8Q14318 412 aa7.23□□□□□ -1.25
CLDND1-208ENST00000503004 FOXD1Q16676 465 aa7.23□□□□□ -1.25
CLDND1-208ENST00000503004 HECW1Q76N89 1606 aa7.22□□□□□ -1.25
CLDND1-208ENST00000503004 ZNF644Q9H582 1327 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-208ENST00000503004 IFT140Q96RY7 1462 aa7.22□□□□□ -1.25
CLDND1-208ENST00000503004 WDR62O43379 1518 aa7.21□□□□□ -1.26
CLDND1-208ENST00000503004 DISP1Q96F81 1524 aa7.21□□□□□ -1.26
CLDND1-208ENST00000503004 KDM6BO15054 1643 aa7.2□□□□□ -1.26
CLDND1-208ENST00000503004 NPM3O75607 178 aaKnown RBP7.2□□□□□ -1.26
CLDND1-208ENST00000503004 CHMP7Q8WUX9 453 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-208ENST00000503004 DENND4BO75064 1496 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-208ENST00000503004 ERCC6Q03468 1493 aa7.2□□□□□ -1.26
CLDND1-208ENST00000503004 KIAA0586Q9BVV6 1533 aa7.2□□□□□ -1.26
CLDND1-208ENST00000503004 GRIN2AQ12879 1464 aa7.19□□□□□ -1.26
CLDND1-208ENST00000503004 TCOF1Q13428 1488 aaKnown RBP7.19□□□□□ -1.26
CLDND1-208ENST00000503004 NUP153P49790 1475 aaKnown RBP7.19□□□□□ -1.26
CLDND1-208ENST00000503004 MPHOSPH9Q99550 1183 aa7.19□□□□□ -1.26
CLDND1-208ENST00000503004 EIF4G3O43432 1585 aaKnown RBP7.18□□□□□ -1.26
CLDND1-208ENST00000503004 KIAA0556O60303 1618 aa7.18□□□□□ -1.26
CLDND1-208ENST00000503004 ANP32CO43423 234 aa7.18□□□□□ -1.26
CLDND1-208ENST00000503004 MIA2Q96PC5 1412 aa7.18□□□□□ -1.26
CLDND1-208ENST00000503004 KDM5BQ9UGL1 1544 aa7.17□□□□□ -1.26
CLDND1-208ENST00000503004 KLHL34Q8N239 644 aa7.17□□□□□ -1.26
CLDND1-208ENST00000503004 MYT1LQ9UL68 1186 aa7.17□□□□□ -1.26
CLDND1-208ENST00000503004 PLB1Q6P1J6 1458 aa7.17□□□□□ -1.26
CLDND1-208ENST00000503004 PRG4Q92954 1404 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-208ENST00000503004 TMEM132AQ24JP5 1023 aa7.17□□□□□ -1.26
CLDND1-208ENST00000503004 ZNF777Q9ULD5 760 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-208ENST00000503004 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
CLDND1-208ENST00000503004 DAPK1P53355 1430 aa7.16□□□□□ -1.26
CLDND1-208ENST00000503004 CDK11AQ9UQ88 783 aaPredicted RBP7.16□□□□□ -1.26
CLDND1-208ENST00000503004 ABCC5O15440 1437 aa7.16□□□□□ -1.26
CLDND1-208ENST00000503004 IL27Q8NEV9 243 aa7.15□□□□□ -1.26
CLDND1-208ENST00000503004 GCC2Q8IWJ2 1684 aa7.15□□□□□ -1.26
CLDND1-208ENST00000503004 HSPA5P11021 654 aaKnown RBP7.15□□□□□ -1.26
CLDND1-208ENST00000503004 JPH4Q96JJ6 628 aa7.15□□□□□ -1.26
CLDND1-208ENST00000503004 CFDP1Q9UEE9 299 aaPredicted RBP7.15□□□□□ -1.26
CLDND1-208ENST00000503004 SENP3Q9H4L4 574 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-208ENST00000503004 WASHC2AQ641Q2 1341 aa7.14□□□□□ -1.27
CLDND1-208ENST00000503004 AKNAQ7Z591 1439 aa7.14□□□□□ -1.27
CLDND1-208ENST00000503004 CEP170Q5SW79 1584 aa7.14□□□□□ -1.27
CLDND1-208ENST00000503004 RAPGEF6Q8TEU7 1601 aa7.14□□□□□ -1.27
CLDND1-208ENST00000503004 SYNJ2O15056 1496 aa7.13□□□□□ -1.27
CLDND1-208ENST00000503004 MAGI1Q96QZ7 1491 aaPredicted RBP7.13□□□□□ -1.27
CLDND1-208ENST00000503004 CCER2I3L3R5 266 aa7.13□□□□□ -1.27
CLDND1-208ENST00000503004 TROQ12816 1431 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-208ENST00000503004 EIF4G2P78344 907 aaKnown RBP eCLIP7.12□□□□□ -1.27
CLDND1-208ENST00000503004 NBPF8Q3BBV2 869 aa7.12□□□□□ -1.27
CLDND1-208ENST00000503004 PPP4R3CPQ6ZMV5 832 aa7.12□□□□□ -1.27
CLDND1-208ENST00000503004 KDM2AQ9Y2K7 1162 aa7.12□□□□□ -1.27
CLDND1-208ENST00000503004 ANKRD30BQ9BXX2 1392 aa7.12□□□□□ -1.27
CLDND1-208ENST00000503004 C11orf95C9JLR9 678 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-208ENST00000503004 ROCK1Q13464 1354 aa7.11□□□□□ -1.27
CLDND1-208ENST00000503004 DNMT1P26358 1616 aaKnown RBP7.11□□□□□ -1.27
CLDND1-208ENST00000503004 KIF14Q15058 1648 aa7.11□□□□□ -1.27
CLDND1-208ENST00000503004 FANCIQ9NVI1 1328 aa7.11□□□□□ -1.27
CLDND1-208ENST00000503004 GPATCH8Q9UKJ3 1502 aaKnown RBP7.11□□□□□ -1.27
CLDND1-208ENST00000503004 CAMSAP2Q08AD1 1489 aa7.11□□□□□ -1.27
CLDND1-208ENST00000503004 NCOA1Q15788 1441 aa7.1□□□□□ -1.27
CLDND1-208ENST00000503004 CARMIL2Q6F5E8 1435 aa7.1□□□□□ -1.27
CLDND1-208ENST00000503004 NUP160Q12769 1436 aa7.1□□□□□ -1.27
CLDND1-208ENST00000503004 PLEKHD1A6NEE1 506 aa7.09□□□□□ -1.27
CLDND1-208ENST00000503004 ZNF326Q5BKZ1 582 aaKnown RBP7.09□□□□□ -1.27
CLDND1-208ENST00000503004 RPRD2Q5VT52 1461 aaKnown RBP7.09□□□□□ -1.27
CLDND1-208ENST00000503004 NBR1Q14596 966 aa7.09□□□□□ -1.28
CLDND1-208ENST00000503004 CCDC184Q52MB2 194 aa7.09□□□□□ -1.28
CLDND1-208ENST00000503004 HNRNPUQ00839 825 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLDND1-208ENST00000503004 CNGB1Q14028 1251 aaPredicted RBP7.08□□□□□ -1.28
CLDND1-208ENST00000503004 PPP6R1Q9UPN7 881 aa7.08□□□□□ -1.28
CLDND1-208ENST00000503004 TEX14Q8IWB6 1497 aa7.08□□□□□ -1.28
CLDND1-208ENST00000503004 PKD2Q13563 968 aa7.08□□□□□ -1.28
CLDND1-208ENST00000503004 C14orf37Q86TY3 774 aa7.08□□□□□ -1.28
CLDND1-208ENST00000503004 PZPP20742 1482 aa7.07□□□□□ -1.28
CLDND1-208ENST00000503004 FOXD4L1Q9NU39 408 aa7.07□□□□□ -1.28
CLDND1-208ENST00000503004 ATP10BO94823 1461 aa7.07□□□□□ -1.28
CLDND1-208ENST00000503004 HNRNPMP52272 730 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLDND1-208ENST00000503004 NPM2Q86SE8 214 aaKnown RBP7.06□□□□□ -1.28
CLDND1-208ENST00000503004 ANKRD50Q9ULJ7 1429 aa7.06□□□□□ -1.28
CLDND1-208ENST00000503004 CCDC7Q96M83 1385 aa7.06□□□□□ -1.28
CLDND1-208ENST00000503004 ANKRD30AQ9BXX3 1397 aa7.06□□□□□ -1.28
CLDND1-208ENST00000503004 NEFLP07196 543 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 POLR3GLQ9BT43 218 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 KIF7Q2M1P5 1343 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 PRKRIP1Q9H875 184 aaPredicted RBP7.05□□□□□ -1.28
CLDND1-208ENST00000503004 ITSN2Q9NZM3 1697 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 CNTLNQ9NXG0 1405 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms