RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 ARHGEF12Q9NZN5 1544 aa30.41■■■□□ 2.46
HERC6-204ENST00000502870 SCAPERQ9BY12 1400 aa30.4■■■□□ 2.46
HERC6-204ENST00000502870 ATP10AO60312 1499 aa30.39■■■□□ 2.46
HERC6-204ENST00000502870 DMRT2Q9Y5R5 561 aa30.39■■■□□ 2.46
HERC6-204ENST00000502870 C9orf84Q5VXU9 1444 aa30.39■■■□□ 2.45
HERC6-204ENST00000502870 PLCH2O75038 1416 aa30.38■■■□□ 2.45
HERC6-204ENST00000502870 EEA1Q15075 1411 aa30.38■■■□□ 2.45
HERC6-204ENST00000502870 DISP3Q9P2K9 1392 aa30.37■■■□□ 2.45
HERC6-204ENST00000502870 MYO5CQ9NQX4 1742 aa30.33■■■□□ 2.45
HERC6-204ENST00000502870 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
HERC6-204ENST00000502870 CDK13Q14004 1512 aaKnown RBP30.31■■■□□ 2.44
HERC6-204ENST00000502870 STRCQ7RTU9 1775 aa30.29■■■□□ 2.44
HERC6-204ENST00000502870 UHRF1BP1Q6BDS2 1440 aa30.29■■■□□ 2.44
HERC6-204ENST00000502870 EFCAB2Q5VUJ9 269 aa30.28■■■□□ 2.44
HERC6-204ENST00000502870 SOCS7O14512 581 aa30.27■■■□□ 2.44
HERC6-204ENST00000502870 ZNF518AQ6AHZ1 1483 aa30.25■■■□□ 2.43
HERC6-204ENST00000502870 CEBPAP49715 358 aaPredicted RBP30.23■■■□□ 2.43
HERC6-204ENST00000502870 ILDR2Q71H61 639 aa30.21■■■□□ 2.43
HERC6-204ENST00000502870 CDK11AQ9UQ88 783 aaPredicted RBP30.2■■■□□ 2.43
HERC6-204ENST00000502870 SPATA31D1Q6ZQQ2 1576 aa30.19■■■□□ 2.42
HERC6-204ENST00000502870 KDM5CP41229 1560 aa30.18■■■□□ 2.42
HERC6-204ENST00000502870 KIF14Q15058 1648 aa30.18■■■□□ 2.42
HERC6-204ENST00000502870 PTPRTO14522 1441 aa30.16■■■□□ 2.42
HERC6-204ENST00000502870 FMN1Q68DA7 1419 aa30.15■■■□□ 2.42
HERC6-204ENST00000502870 ARHGAP5Q13017 1502 aa30.15■■■□□ 2.42
HERC6-204ENST00000502870 REREQ9P2R6 1566 aa30.15■■■□□ 2.42
HERC6-204ENST00000502870 MYT1LQ9UL68 1186 aa30.14■■■□□ 2.42
HERC6-204ENST00000502870 DIP2CQ9Y2E4 1556 aa30.12■■■□□ 2.41
HERC6-204ENST00000502870 ATP1B4Q9UN42 357 aaPredicted RBP30.12■■■□□ 2.41
HERC6-204ENST00000502870 C3P01024 1663 aa30.11■■■□□ 2.41
HERC6-204ENST00000502870 ESF1Q9H501 851 aaKnown RBP30.11■■■□□ 2.41
HERC6-204ENST00000502870 IQSEC2Q5JU85 1478 aa30.08■■■□□ 2.41
HERC6-204ENST00000502870 CLIP1P30622 1438 aa30.08■■■□□ 2.41
HERC6-204ENST00000502870 AFAP1Q8N556 730 aa30.07■■■□□ 2.4
HERC6-204ENST00000502870 TROQ12816 1431 aaPredicted RBP30.05■■■□□ 2.4
HERC6-204ENST00000502870 ABCA6Q8N139 1617 aa30.05■■■□□ 2.4
HERC6-204ENST00000502870 AGLP35573 1532 aa30.04■■■□□ 2.4
HERC6-204ENST00000502870 MLH3Q9UHC1 1453 aa30.04■■■□□ 2.4
HERC6-204ENST00000502870 TRAPPC8Q9Y2L5 1435 aa30.03■■■□□ 2.4
HERC6-204ENST00000502870 LTBP4Q8N2S1 1624 aa30.01■■■□□ 2.39
HERC6-204ENST00000502870 CNTLNQ9NXG0 1405 aa29.99■■■□□ 2.39
HERC6-204ENST00000502870 CDC42BPBQ9Y5S2 1711 aa29.99■■■□□ 2.39
HERC6-204ENST00000502870 NCOA1Q15788 1441 aa29.96■■■□□ 2.39
HERC6-204ENST00000502870 PREX2Q70Z35 1606 aa29.94■■■□□ 2.38
HERC6-204ENST00000502870 ARHGAP35Q9NRY4 1499 aa29.93■■■□□ 2.38
HERC6-204ENST00000502870 ABCC1P33527 1531 aa29.93■■■□□ 2.38
HERC6-204ENST00000502870 ITSN2Q9NZM3 1697 aa29.93■■■□□ 2.38
HERC6-204ENST00000502870 UBTFP17480 764 aaKnown RBP29.93■■■□□ 2.38
HERC6-204ENST00000502870 MROH2AA6NES4 1674 aa29.9■■■□□ 2.38
HERC6-204ENST00000502870 LRRIQ1Q96JM4 1722 aa29.89■■■□□ 2.38
HERC6-204ENST00000502870 NPATQ14207 1427 aa29.88■■■□□ 2.37
HERC6-204ENST00000502870 KIDINS220Q9ULH0 1771 aa29.87■■■□□ 2.37
HERC6-204ENST00000502870 CAMSAP1Q5T5Y3 1602 aa29.87■■■□□ 2.37
HERC6-204ENST00000502870 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
HERC6-204ENST00000502870 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
HERC6-204ENST00000502870 SUPT6HQ7KZ85 1726 aaKnown RBP29.78■■■□□ 2.36
HERC6-204ENST00000502870 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
HERC6-204ENST00000502870 UBAP1LF5GYI3 381 aa29.76■■■□□ 2.35
HERC6-204ENST00000502870 ZNF142P52746 1687 aaPredicted RBP29.76■■■□□ 2.35
HERC6-204ENST00000502870 ZMYM3Q14202 1370 aa29.75■■■□□ 2.35
HERC6-204ENST00000502870 SAMD9LQ8IVG5 1584 aa29.74■■■□□ 2.35
HERC6-204ENST00000502870 PLA2R1Q13018 1463 aa29.74■■■□□ 2.35
HERC6-204ENST00000502870 PKD2Q13563 968 aa29.73■■■□□ 2.35
HERC6-204ENST00000502870 MYO3AQ8NEV4 1616 aa29.73■■■□□ 2.35
HERC6-204ENST00000502870 ZNF335Q9H4Z2 1342 aaPredicted RBP29.71■■■□□ 2.35
HERC6-204ENST00000502870 NCKAP5LQ9HCH0 1330 aa29.71■■■□□ 2.35
HERC6-204ENST00000502870 CLTCQ00610 1675 aaKnown RBP29.7■■■□□ 2.35
HERC6-204ENST00000502870 CASKIN1Q8WXD9 1431 aa29.7■■■□□ 2.34
HERC6-204ENST00000502870 CEP170BQ9Y4F5 1589 aaPredicted RBP29.68■■■□□ 2.34
HERC6-204ENST00000502870 SPAG9O60271 1321 aaKnown RBP29.68■■■□□ 2.34
HERC6-204ENST00000502870 SYCP2Q9BX26 1530 aa29.66■■■□□ 2.34
HERC6-204ENST00000502870 ZNF777Q9ULD5 760 aaPredicted RBP29.65■■■□□ 2.34
HERC6-204ENST00000502870 TCOF1Q13428 1488 aaKnown RBP29.65■■■□□ 2.34
HERC6-204ENST00000502870 ATP7AQ04656 1500 aa29.65■■■□□ 2.34
HERC6-204ENST00000502870 PLXNC1O60486 1568 aa29.62■■■□□ 2.33
HERC6-204ENST00000502870 PTPRKQ15262 1439 aa29.6■■■□□ 2.33
HERC6-204ENST00000502870 PLEKHH2Q8IVE3 1493 aa29.6■■■□□ 2.33
HERC6-204ENST00000502870 INO80Q9ULG1 1556 aaPredicted RBP29.6■■■□□ 2.33
HERC6-204ENST00000502870 PPP6R1Q9UPN7 881 aa29.59■■■□□ 2.33
HERC6-204ENST00000502870 A2MP01023 1474 aa29.59■■■□□ 2.33
HERC6-204ENST00000502870 FYCO1Q9BQS8 1478 aa29.57■■■□□ 2.32
HERC6-204ENST00000502870 KIAA1107Q9UPP5 1409 aa29.56■■■□□ 2.32
HERC6-204ENST00000502870 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
HERC6-204ENST00000502870 ADGBQ8N7X0 1667 aa29.54■■■□□ 2.32
HERC6-204ENST00000502870 HNRNPMP52272 730 aaKnown RBP eCLIP29.54■■■□□ 2.32
HERC6-204ENST00000502870 GGT6Q6P531 493 aa29.52■■■□□ 2.32
HERC6-204ENST00000502870 A2ML1A8K2U0 1454 aa29.51■■■□□ 2.31
HERC6-204ENST00000502870 MED1Q15648 1581 aaPredicted RBP29.5■■■□□ 2.31
HERC6-204ENST00000502870 POLR1AO95602 1720 aaPredicted RBP29.5■■■□□ 2.31
HERC6-204ENST00000502870 SCAF1Q9H7N4 1312 aaKnown RBP29.49■■■□□ 2.31
HERC6-204ENST00000502870 CFDP1Q9UEE9 299 aaPredicted RBP29.49■■■□□ 2.31
HERC6-204ENST00000502870 CPS1P31327 1500 aa29.49■■■□□ 2.31
HERC6-204ENST00000502870 TOM1O60784 492 aa29.48■■■□□ 2.31
HERC6-204ENST00000502870 DNMT1P26358 1616 aaKnown RBP29.48■■■□□ 2.31
HERC6-204ENST00000502870 CCNB3Q8WWL7 1395 aa29.45■■■□□ 2.31
HERC6-204ENST00000502870 HSPA1LP34931 641 aa29.44■■■□□ 2.3
HERC6-204ENST00000502870 PIP4K2BP78356 416 aa29.42■■■□□ 2.3
HERC6-204ENST00000502870 SHANK2Q9UPX8 1470 aa29.39■■■□□ 2.3
HERC6-204ENST00000502870 NEURL4Q96JN8 1562 aa29.37■■■□□ 2.29
HERC6-204ENST00000502870 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms