RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PTPRTO14522 1441 aa8.61□□□□□ -1.03
HTT-202ENST00000502820 TOM1O60784 492 aa8.59□□□□□ -1.03
HTT-202ENST00000502820 SCAPERQ9BY12 1400 aa8.59□□□□□ -1.03
HTT-202ENST00000502820 ABCA9Q8IUA7 1624 aa8.58□□□□□ -1.04
HTT-202ENST00000502820 FHOD3Q2V2M9 1422 aa8.58□□□□□ -1.04
HTT-202ENST00000502820 EFCAB5A4FU69 1503 aa8.57□□□□□ -1.04
HTT-202ENST00000502820 FER1L4A9Z1Z3 1794 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 LTBP4Q8N2S1 1624 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 AFAP1Q8N556 730 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 ATP10AO60312 1499 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 MED1Q15648 1581 aaPredicted RBP8.56□□□□□ -1.04
HTT-202ENST00000502820 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 PREX1Q8TCU6 1659 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 STRCQ7RTU9 1775 aa8.56□□□□□ -1.04
HTT-202ENST00000502820 PPP6R1Q9UPN7 881 aa8.55□□□□□ -1.04
HTT-202ENST00000502820 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
HTT-202ENST00000502820 EFCAB2Q5VUJ9 269 aa8.54□□□□□ -1.04
HTT-202ENST00000502820 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
HTT-202ENST00000502820 IQSEC2Q5JU85 1478 aa8.53□□□□□ -1.04
HTT-202ENST00000502820 MAGI2Q86UL8 1455 aa8.53□□□□□ -1.04
HTT-202ENST00000502820 EHMT2Q96KQ7 1210 aa8.53□□□□□ -1.04
HTT-202ENST00000502820 SIGLEC1Q9BZZ2 1709 aa8.53□□□□□ -1.04
HTT-202ENST00000502820 ARHGEF12Q9NZN5 1544 aa8.53□□□□□ -1.04
HTT-202ENST00000502820 TRAPPC8Q9Y2L5 1435 aa8.53□□□□□ -1.04
HTT-202ENST00000502820 NCOA1Q15788 1441 aa8.52□□□□□ -1.05
HTT-202ENST00000502820 RICTORQ6R327 1708 aa8.51□□□□□ -1.05
HTT-202ENST00000502820 PKD2Q13563 968 aa8.5□□□□□ -1.05
HTT-202ENST00000502820 CAMSAP1Q5T5Y3 1602 aa8.5□□□□□ -1.05
HTT-202ENST00000502820 ZMYM4Q5VZL5 1548 aa8.49□□□□□ -1.05
HTT-202ENST00000502820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
HTT-202ENST00000502820 RAPGEF6Q8TEU7 1601 aa8.48□□□□□ -1.05
HTT-202ENST00000502820 NUP153P49790 1475 aaKnown RBP8.48□□□□□ -1.05
HTT-202ENST00000502820 CFAP74Q9C0B2 1584 aa8.48□□□□□ -1.05
HTT-202ENST00000502820 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
HTT-202ENST00000502820 GGT6Q6P531 493 aa8.47□□□□□ -1.05
HTT-202ENST00000502820 PLCH2O75038 1416 aa8.46□□□□□ -1.05
HTT-202ENST00000502820 RGS17Q9UGC6 210 aaPredicted RBP8.46□□□□□ -1.06
HTT-202ENST00000502820 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
HTT-202ENST00000502820 ZMYM3Q14202 1370 aa8.46□□□□□ -1.06
HTT-202ENST00000502820 POTEAQ6S8J7 498 aa8.45□□□□□ -1.06
HTT-202ENST00000502820 PRXQ9BXM0 1461 aa8.44□□□□□ -1.06
HTT-202ENST00000502820 CDK11AQ9UQ88 783 aaPredicted RBP8.43□□□□□ -1.06
HTT-202ENST00000502820 ZNF518AQ6AHZ1 1483 aa8.43□□□□□ -1.06
HTT-202ENST00000502820 ARHGAP5Q13017 1502 aa8.42□□□□□ -1.06
HTT-202ENST00000502820 CDK13Q14004 1512 aaKnown RBP8.42□□□□□ -1.06
HTT-202ENST00000502820 C3P01024 1663 aa8.41□□□□□ -1.06
HTT-202ENST00000502820 PTPRKQ15262 1439 aa8.41□□□□□ -1.06
HTT-202ENST00000502820 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
HTT-202ENST00000502820 ANKLE2Q86XL3 938 aa8.4□□□□□ -1.06
HTT-202ENST00000502820 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
HTT-202ENST00000502820 TRIM52Q96A61 297 aa8.4□□□□□ -1.06
HTT-202ENST00000502820 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
HTT-202ENST00000502820 NPATQ14207 1427 aa8.37□□□□□ -1.07
HTT-202ENST00000502820 DIP2CQ9Y2E4 1556 aa8.37□□□□□ -1.07
HTT-202ENST00000502820 HNRNPMP52272 730 aaKnown RBP eCLIP8.37□□□□□ -1.07
HTT-202ENST00000502820 FBXO31Q5XUX0 539 aaPredicted RBP8.37□□□□□ -1.07
HTT-202ENST00000502820 EEA1Q15075 1411 aa8.37□□□□□ -1.07
HTT-202ENST00000502820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.36□□□□□ -1.07
HTT-202ENST00000502820 SPAG9O60271 1321 aaKnown RBP8.36□□□□□ -1.07
HTT-202ENST00000502820 CPS1P31327 1500 aa8.36□□□□□ -1.07
HTT-202ENST00000502820 SETD1BQ9UPS6 1966 aaKnown RBP8.36□□□□□ -1.07
HTT-202ENST00000502820 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
HTT-202ENST00000502820 PELP1Q8IZL8 1130 aaKnown RBP8.36□□□□□ -1.07
HTT-202ENST00000502820 PLA2R1Q13018 1463 aa8.35□□□□□ -1.07
HTT-202ENST00000502820 TCOF1Q13428 1488 aaKnown RBP8.35□□□□□ -1.07
HTT-202ENST00000502820 CLIP1P30622 1438 aa8.35□□□□□ -1.07
HTT-202ENST00000502820 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
HTT-202ENST00000502820 ABCA6Q8N139 1617 aa8.34□□□□□ -1.07
HTT-202ENST00000502820 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
HTT-202ENST00000502820 THEMISQ8N1K5 641 aaPredicted RBP8.34□□□□□ -1.07
HTT-202ENST00000502820 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
HTT-202ENST00000502820 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.07
HTT-202ENST00000502820 AGLP35573 1532 aa8.34□□□□□ -1.08
HTT-202ENST00000502820 MLH3Q9UHC1 1453 aa8.33□□□□□ -1.08
HTT-202ENST00000502820 RBM33Q96EV2 1170 aaKnown RBP8.33□□□□□ -1.08
HTT-202ENST00000502820 KDM5CP41229 1560 aa8.31□□□□□ -1.08
HTT-202ENST00000502820 NPHP4O75161 1426 aaPredicted RBP8.31□□□□□ -1.08
HTT-202ENST00000502820 MYO3AQ8NEV4 1616 aa8.31□□□□□ -1.08
HTT-202ENST00000502820 TNRQ92752 1358 aa8.31□□□□□ -1.08
HTT-202ENST00000502820 A2ML1A8K2U0 1454 aa8.3□□□□□ -1.08
HTT-202ENST00000502820 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
HTT-202ENST00000502820 TROQ12816 1431 aaPredicted RBP8.29□□□□□ -1.08
HTT-202ENST00000502820 KIF14Q15058 1648 aa8.29□□□□□ -1.08
HTT-202ENST00000502820 SUPT6HQ7KZ85 1726 aaKnown RBP8.29□□□□□ -1.08
HTT-202ENST00000502820 MYO5CQ9NQX4 1742 aa8.29□□□□□ -1.08
HTT-202ENST00000502820 KIF3BO15066 747 aa8.29□□□□□ -1.08
HTT-202ENST00000502820 CLTCQ00610 1675 aaKnown RBP8.28□□□□□ -1.08
HTT-202ENST00000502820 REREQ9P2R6 1566 aa8.28□□□□□ -1.08
HTT-202ENST00000502820 SETD1AO15047 1707 aaKnown RBP8.27□□□□□ -1.09
HTT-202ENST00000502820 NUTM2BA6NNL0 878 aaPredicted RBP8.27□□□□□ -1.09
HTT-202ENST00000502820 NUTM2EB1AL46 878 aaPredicted RBP8.27□□□□□ -1.09
HTT-202ENST00000502820 RXRBP28702 533 aa8.27□□□□□ -1.09
HTT-202ENST00000502820 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
HTT-202ENST00000502820 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
HTT-202ENST00000502820 BCANQ96GW7 911 aa8.27□□□□□ -1.09
HTT-202ENST00000502820 CFDP1Q9UEE9 299 aaPredicted RBP8.27□□□□□ -1.09
HTT-202ENST00000502820 LRRC7Q96NW7 1537 aa8.27□□□□□ -1.09
HTT-202ENST00000502820 A2MP01023 1474 aa8.26□□□□□ -1.09
HTT-202ENST00000502820 FAM135AQ9P2D6 1515 aa8.26□□□□□ -1.09
HTT-202ENST00000502820 ZNF772Q68DY9 489 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms