RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
CPNE4-202ENST00000502818 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
CPNE4-202ENST00000502818 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
CPNE4-202ENST00000502818 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
CPNE4-202ENST00000502818 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
CPNE4-202ENST00000502818 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
CPNE4-202ENST00000502818 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
CPNE4-202ENST00000502818 CFDP1Q9UEE9 299 aaPredicted RBP10.91□□□□□ -0.66
CPNE4-202ENST00000502818 UHRF1BP1LA0JNW5 1464 aa10.91□□□□□ -0.66
CPNE4-202ENST00000502818 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
CPNE4-202ENST00000502818 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
CPNE4-202ENST00000502818 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
CPNE4-202ENST00000502818 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
CPNE4-202ENST00000502818 SETD5Q9C0A6 1442 aa10.9□□□□□ -0.66
CPNE4-202ENST00000502818 ADRA2BP18089 450 aa10.9□□□□□ -0.67
CPNE4-202ENST00000502818 ABCC5O15440 1437 aa10.88□□□□□ -0.67
CPNE4-202ENST00000502818 CAMSAP2Q08AD1 1489 aa10.88□□□□□ -0.67
CPNE4-202ENST00000502818 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
CPNE4-202ENST00000502818 ZEB1P37275 1124 aaPredicted RBP10.87□□□□□ -0.67
CPNE4-202ENST00000502818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.87□□□□□ -0.67
CPNE4-202ENST00000502818 CDC42BPAQ5VT25 1732 aa10.87□□□□□ -0.67
CPNE4-202ENST00000502818 DAPK1P53355 1430 aa10.86□□□□□ -0.67
CPNE4-202ENST00000502818 NAIPQ13075 1403 aa10.86□□□□□ -0.67
CPNE4-202ENST00000502818 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPNE4-202ENST00000502818 KDM6BO15054 1643 aa10.85□□□□□ -0.67
CPNE4-202ENST00000502818 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
CPNE4-202ENST00000502818 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
CPNE4-202ENST00000502818 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
CPNE4-202ENST00000502818 DNMT1P26358 1616 aaKnown RBP10.82□□□□□ -0.68
CPNE4-202ENST00000502818 ASXL2Q76L83 1435 aa10.82□□□□□ -0.68
CPNE4-202ENST00000502818 CDC42BPBQ9Y5S2 1711 aa10.82□□□□□ -0.68
CPNE4-202ENST00000502818 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
CPNE4-202ENST00000502818 MAPKBP1O60336 1514 aa10.81□□□□□ -0.68
CPNE4-202ENST00000502818 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
CPNE4-202ENST00000502818 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
CPNE4-202ENST00000502818 MYT1Q01538 1121 aa10.81□□□□□ -0.68
CPNE4-202ENST00000502818 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
CPNE4-202ENST00000502818 AKNAQ7Z591 1439 aa10.8□□□□□ -0.68
CPNE4-202ENST00000502818 RIMBP3CA6NJZ7 1639 aa10.8□□□□□ -0.68
CPNE4-202ENST00000502818 RIMBP3BA6NNM3 1639 aa10.8□□□□□ -0.68
CPNE4-202ENST00000502818 RIMBP3Q9UFD9 1639 aa10.8□□□□□ -0.68
CPNE4-202ENST00000502818 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
CPNE4-202ENST00000502818 ARHGAP5Q13017 1502 aa10.79□□□□□ -0.68
CPNE4-202ENST00000502818 ARHGEF12Q9NZN5 1544 aa10.79□□□□□ -0.68
CPNE4-202ENST00000502818 SIN3AQ96ST3 1273 aa10.79□□□□□ -0.68
CPNE4-202ENST00000502818 PLCH2O75038 1416 aa10.78□□□□□ -0.68
CPNE4-202ENST00000502818 NCOA1Q15788 1441 aa10.77□□□□□ -0.69
CPNE4-202ENST00000502818 ROCK1Q13464 1354 aa10.77□□□□□ -0.69
CPNE4-202ENST00000502818 SYCP2Q9BX26 1530 aa10.77□□□□□ -0.69
CPNE4-202ENST00000502818 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPNE4-202ENST00000502818 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-202ENST00000502818 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
CPNE4-202ENST00000502818 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
CPNE4-202ENST00000502818 GCC2Q8IWJ2 1684 aa10.75□□□□□ -0.69
CPNE4-202ENST00000502818 MYO5CQ9NQX4 1742 aa10.75□□□□□ -0.69
CPNE4-202ENST00000502818 CROCC2H7BZ55 1655 aa10.74□□□□□ -0.69
CPNE4-202ENST00000502818 TRAPPC8Q9Y2L5 1435 aa10.74□□□□□ -0.69
CPNE4-202ENST00000502818 NEUROD1Q13562 356 aa10.73□□□□□ -0.69
CPNE4-202ENST00000502818 EFCAB2Q5VUJ9 269 aa10.73□□□□□ -0.69
CPNE4-202ENST00000502818 ADGRL2O95490 1459 aa10.73□□□□□ -0.69
CPNE4-202ENST00000502818 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
CPNE4-202ENST00000502818 TSPY4P0CV99 314 aa10.72□□□□□ -0.69
CPNE4-202ENST00000502818 TSPY10P0CW01 314 aa10.72□□□□□ -0.69
CPNE4-202ENST00000502818 CCDC141Q6ZP82 1450 aa10.72□□□□□ -0.69
CPNE4-202ENST00000502818 ARHGEF5Q12774 1597 aa10.72□□□□□ -0.69
CPNE4-202ENST00000502818 MAPK8IP2Q13387 824 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-202ENST00000502818 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
CPNE4-202ENST00000502818 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.69
CPNE4-202ENST00000502818 ANKRD30AQ9BXX3 1397 aa10.71□□□□□ -0.69
CPNE4-202ENST00000502818 MPHOSPH9Q99550 1183 aa10.7□□□□□ -0.7
CPNE4-202ENST00000502818 SHANK2Q9UPX8 1470 aa10.7□□□□□ -0.7
CPNE4-202ENST00000502818 KIAA1107Q9UPP5 1409 aa10.7□□□□□ -0.7
CPNE4-202ENST00000502818 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
CPNE4-202ENST00000502818 ABCC1P33527 1531 aa10.7□□□□□ -0.7
CPNE4-202ENST00000502818 FANCAO15360 1455 aa10.69□□□□□ -0.7
CPNE4-202ENST00000502818 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
CPNE4-202ENST00000502818 ANKRD50Q9ULJ7 1429 aa10.69□□□□□ -0.7
CPNE4-202ENST00000502818 CD109Q6YHK3 1445 aa10.68□□□□□ -0.7
CPNE4-202ENST00000502818 PZPP20742 1482 aa10.67□□□□□ -0.7
CPNE4-202ENST00000502818 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
CPNE4-202ENST00000502818 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
CPNE4-202ENST00000502818 PLEKHH2Q8IVE3 1493 aa10.66□□□□□ -0.7
CPNE4-202ENST00000502818 ARAP3Q8WWN8 1544 aa10.65□□□□□ -0.7
CPNE4-202ENST00000502818 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
CPNE4-202ENST00000502818 ADGRL1O94910 1474 aa10.65□□□□□ -0.7
CPNE4-202ENST00000502818 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
CPNE4-202ENST00000502818 MAST1Q9Y2H9 1570 aa10.64□□□□□ -0.71
CPNE4-202ENST00000502818 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
CPNE4-202ENST00000502818 NUP155O75694 1391 aa10.63□□□□□ -0.71
CPNE4-202ENST00000502818 RAPGEF3O95398 923 aa10.62□□□□□ -0.71
CPNE4-202ENST00000502818 PKD2Q13563 968 aa10.62□□□□□ -0.71
CPNE4-202ENST00000502818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
CPNE4-202ENST00000502818 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
CPNE4-202ENST00000502818 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
CPNE4-202ENST00000502818 ZFYVE16Q7Z3T8 1539 aa10.61□□□□□ -0.71
CPNE4-202ENST00000502818 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
CPNE4-202ENST00000502818 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
CPNE4-202ENST00000502818 POTEMA6NI47 508 aa10.6□□□□□ -0.71
CPNE4-202ENST00000502818 PPP1R15AO75807 674 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-202ENST00000502818 DIP2BQ9P265 1576 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms