RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.13
HMGXB3-201ENST00000502717 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
HMGXB3-201ENST00000502717 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
HMGXB3-201ENST00000502717 PNNQ9H307 717 aaKnown RBP22.14■■□□□ 1.13
HMGXB3-201ENST00000502717 NCLP19338 710 aaKnown RBP22.13■■□□□ 1.13
HMGXB3-201ENST00000502717 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
HMGXB3-201ENST00000502717 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
HMGXB3-201ENST00000502717 FRAT1Q92837 279 aaPredicted RBP22.1■■□□□ 1.13
HMGXB3-201ENST00000502717 CFAP53Q96M91 514 aa22.1■■□□□ 1.13
HMGXB3-201ENST00000502717 IGF1RP08069 1367 aa22.09■■□□□ 1.13
HMGXB3-201ENST00000502717 MS4A1P11836 297 aa22.09■■□□□ 1.13
HMGXB3-201ENST00000502717 PTMAP06454 111 aaKnown RBP22.08■■□□□ 1.13
HMGXB3-201ENST00000502717 HSCBQ8IWL3 235 aa22.08■■□□□ 1.12
HMGXB3-201ENST00000502717 TMF1P82094 1093 aa22.08■■□□□ 1.12
HMGXB3-201ENST00000502717 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
HMGXB3-201ENST00000502717 FOXD1Q16676 465 aa22.07■■□□□ 1.12
HMGXB3-201ENST00000502717 DCAF11Q8TEB1 546 aa22.07■■□□□ 1.12
HMGXB3-201ENST00000502717 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
HMGXB3-201ENST00000502717 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
HMGXB3-201ENST00000502717 KIF21BO75037 1637 aa22.03■■□□□ 1.12
HMGXB3-201ENST00000502717 DNTTIP2Q5QJE6 756 aaKnown RBP22.03■■□□□ 1.12
HMGXB3-201ENST00000502717 NLRP13Q86W25 1043 aa22.02■■□□□ 1.12
HMGXB3-201ENST00000502717 GOLGA6L3A6NEY3 463 aa22.01■■□□□ 1.11
HMGXB3-201ENST00000502717 SLKQ9H2G2 1235 aaPredicted RBP22.01■■□□□ 1.11
HMGXB3-201ENST00000502717 MSNP26038 577 aaKnown RBP22.01■■□□□ 1.11
HMGXB3-201ENST00000502717 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
HMGXB3-201ENST00000502717 NEUROD2Q15784 382 aa22.01■■□□□ 1.11
HMGXB3-201ENST00000502717 CFTRP13569 1480 aa22■■□□□ 1.11
HMGXB3-201ENST00000502717 PKD2Q13563 968 aa21.98■■□□□ 1.11
HMGXB3-201ENST00000502717 PTMSP20962 102 aa21.98■■□□□ 1.11
HMGXB3-201ENST00000502717 EXOC6Q8TAG9 804 aa21.98■■□□□ 1.11
HMGXB3-201ENST00000502717 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
HMGXB3-201ENST00000502717 CASC1Q6TDU7 716 aa21.96■■□□□ 1.11
HMGXB3-201ENST00000502717 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
HMGXB3-201ENST00000502717 CHMP4BQ9H444 224 aaKnown RBP21.96■■□□□ 1.11
HMGXB3-201ENST00000502717 KIF15Q9NS87 1388 aa21.96■■□□□ 1.11
HMGXB3-201ENST00000502717 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
HMGXB3-201ENST00000502717 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
HMGXB3-201ENST00000502717 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
HMGXB3-201ENST00000502717 CENPQQ7L2Z9 268 aaPredicted RBP21.95■■□□□ 1.1
HMGXB3-201ENST00000502717 MYBBP1AQ9BQG0 1328 aaKnown RBP21.95■■□□□ 1.1
HMGXB3-201ENST00000502717 SPRYD3Q8NCJ5 442 aa21.95■■□□□ 1.1
HMGXB3-201ENST00000502717 GBP4Q96PP9 640 aa21.94■■□□□ 1.1
HMGXB3-201ENST00000502717 GZF1Q9H116 711 aaPredicted RBP21.93■■□□□ 1.1
HMGXB3-201ENST00000502717 PHLDB1Q86UU1 1377 aa21.93■■□□□ 1.1
HMGXB3-201ENST00000502717 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
HMGXB3-201ENST00000502717 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
HMGXB3-201ENST00000502717 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
HMGXB3-201ENST00000502717 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
HMGXB3-201ENST00000502717 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
HMGXB3-201ENST00000502717 PLEKHG5O94827 1062 aa21.9■■□□□ 1.1
HMGXB3-201ENST00000502717 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
HMGXB3-201ENST00000502717 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
HMGXB3-201ENST00000502717 JPH4Q96JJ6 628 aa21.89■■□□□ 1.1
HMGXB3-201ENST00000502717 RWDD1Q9H446 243 aaPredicted RBP21.89■■□□□ 1.09
HMGXB3-201ENST00000502717 MSH5O43196 834 aa21.89■■□□□ 1.09
HMGXB3-201ENST00000502717 HSP90AA2PQ14568 343 aaPredicted RBP21.88■■□□□ 1.09
HMGXB3-201ENST00000502717 SLC4A3P48751 1232 aa21.88■■□□□ 1.09
HMGXB3-201ENST00000502717 PMFBP1Q8TBY8 1022 aa21.88■■□□□ 1.09
HMGXB3-201ENST00000502717 ANKRD30AQ9BXX3 1397 aa21.88■■□□□ 1.09
HMGXB3-201ENST00000502717 CCDC7Q96M83 1385 aa21.87■■□□□ 1.09
HMGXB3-201ENST00000502717 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
HMGXB3-201ENST00000502717 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
HMGXB3-201ENST00000502717 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
HMGXB3-201ENST00000502717 UACAQ9BZF9 1416 aa21.85■■□□□ 1.09
HMGXB3-201ENST00000502717 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
HMGXB3-201ENST00000502717 MLECQ14165 292 aa21.83■■□□□ 1.09
HMGXB3-201ENST00000502717 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
HMGXB3-201ENST00000502717 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.08
HMGXB3-201ENST00000502717 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
HMGXB3-201ENST00000502717 CRBNQ96SW2 442 aa21.82■■□□□ 1.08
HMGXB3-201ENST00000502717 NFKBIBQ15653 356 aa21.81■■□□□ 1.08
HMGXB3-201ENST00000502717 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
HMGXB3-201ENST00000502717 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
HMGXB3-201ENST00000502717 KANK1Q14678 1352 aa21.8■■□□□ 1.08
HMGXB3-201ENST00000502717 PRXQ9BXM0 1461 aa21.79■■□□□ 1.08
HMGXB3-201ENST00000502717 PLIN1O60240 522 aa21.79■■□□□ 1.08
HMGXB3-201ENST00000502717 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
HMGXB3-201ENST00000502717 NUP155O75694 1391 aa21.79■■□□□ 1.08
HMGXB3-201ENST00000502717 LMOD2Q6P5Q4 547 aa21.78■■□□□ 1.08
HMGXB3-201ENST00000502717 IL27Q8NEV9 243 aa21.77■■□□□ 1.08
HMGXB3-201ENST00000502717 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.08
HMGXB3-201ENST00000502717 KIF7Q2M1P5 1343 aa21.77■■□□□ 1.07
HMGXB3-201ENST00000502717 USP47Q96K76 1375 aa21.77■■□□□ 1.07
HMGXB3-201ENST00000502717 DDX11L8A8MPP1 907 aa21.75■■□□□ 1.07
HMGXB3-201ENST00000502717 VSIG10Q8N0Z9 540 aa21.75■■□□□ 1.07
HMGXB3-201ENST00000502717 CHAF1AQ13111 956 aaPredicted RBP21.75■■□□□ 1.07
HMGXB3-201ENST00000502717 PRKCSHP14314 528 aaPredicted RBP21.74■■□□□ 1.07
HMGXB3-201ENST00000502717 CUX1P39880 1505 aa21.74■■□□□ 1.07
HMGXB3-201ENST00000502717 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
HMGXB3-201ENST00000502717 ST20-MTHFSA0A0A6YYL1 179 aa21.73■■□□□ 1.07
HMGXB3-201ENST00000502717 FGD6Q6ZV73 1430 aa21.73■■□□□ 1.07
HMGXB3-201ENST00000502717 MFAP1P55081 439 aaKnown RBP21.73■■□□□ 1.07
HMGXB3-201ENST00000502717 MORC1Q86VD1 984 aa21.72■■□□□ 1.07
HMGXB3-201ENST00000502717 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
HMGXB3-201ENST00000502717 CENPJQ9HC77 1338 aaPredicted RBP21.71■■□□□ 1.07
HMGXB3-201ENST00000502717 PLCB2Q00722 1185 aa21.71■■□□□ 1.07
HMGXB3-201ENST00000502717 IPO8O15397 1037 aaKnown RBP21.71■■□□□ 1.07
HMGXB3-201ENST00000502717 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
HMGXB3-201ENST00000502717 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms