RNA–Protein interactions for RNA: ENST00000502572.1

GDNF-205, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene GDNF, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-205ENST00000502572 STRCQ7RTU9 1775 aa29.94■■■□□ 2.38
GDNF-205ENST00000502572 ARHGEF12Q9NZN5 1544 aa29.93■■■□□ 2.38
GDNF-205ENST00000502572 MLECQ14165 292 aa29.92■■■□□ 2.38
GDNF-205ENST00000502572 DMRT2Q9Y5R5 561 aa29.92■■■□□ 2.38
GDNF-205ENST00000502572 SPATA31D1Q6ZQQ2 1576 aa29.91■■■□□ 2.38
GDNF-205ENST00000502572 SETD1BQ9UPS6 1966 aaKnown RBP29.85■■■□□ 2.37
GDNF-205ENST00000502572 ATP10AO60312 1499 aa29.84■■■□□ 2.37
GDNF-205ENST00000502572 C9orf84Q5VXU9 1444 aa29.81■■■□□ 2.36
GDNF-205ENST00000502572 SCAPERQ9BY12 1400 aa29.8■■■□□ 2.36
GDNF-205ENST00000502572 UHRF1BP1Q6BDS2 1440 aa29.78■■■□□ 2.36
GDNF-205ENST00000502572 PLCH2O75038 1416 aa29.77■■■□□ 2.36
GDNF-205ENST00000502572 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
GDNF-205ENST00000502572 PTPRTO14522 1441 aa29.76■■■□□ 2.35
GDNF-205ENST00000502572 CSRNP3Q8WYN3 585 aa29.71■■■□□ 2.35
GDNF-205ENST00000502572 IQSEC2Q5JU85 1478 aa29.71■■■□□ 2.35
GDNF-205ENST00000502572 LTBP4Q8N2S1 1624 aa29.67■■■□□ 2.34
GDNF-205ENST00000502572 MYO5CQ9NQX4 1742 aa29.67■■■□□ 2.34
GDNF-205ENST00000502572 CDK13Q14004 1512 aaKnown RBP29.64■■■□□ 2.34
GDNF-205ENST00000502572 RANGAP1P46060 587 aaPredicted RBP29.63■■■□□ 2.33
GDNF-205ENST00000502572 C3P01024 1663 aa29.63■■■□□ 2.33
GDNF-205ENST00000502572 ZNF518AQ6AHZ1 1483 aa29.62■■■□□ 2.33
GDNF-205ENST00000502572 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
GDNF-205ENST00000502572 KDM5CP41229 1560 aa29.6■■■□□ 2.33
GDNF-205ENST00000502572 REREQ9P2R6 1566 aa29.6■■■□□ 2.33
GDNF-205ENST00000502572 DIP2CQ9Y2E4 1556 aa29.56■■■□□ 2.32
GDNF-205ENST00000502572 NCOA1Q15788 1441 aa29.53■■■□□ 2.32
GDNF-205ENST00000502572 TRAPPC8Q9Y2L5 1435 aa29.53■■■□□ 2.32
GDNF-205ENST00000502572 AFAP1Q8N556 730 aa29.49■■■□□ 2.31
GDNF-205ENST00000502572 AGLP35573 1532 aa29.49■■■□□ 2.31
GDNF-205ENST00000502572 EEA1Q15075 1411 aa29.48■■■□□ 2.31
GDNF-205ENST00000502572 ABCA6Q8N139 1617 aa29.48■■■□□ 2.31
GDNF-205ENST00000502572 KIF14Q15058 1648 aa29.46■■■□□ 2.31
GDNF-205ENST00000502572 MLH3Q9UHC1 1453 aa29.46■■■□□ 2.31
GDNF-205ENST00000502572 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.31
GDNF-205ENST00000502572 ESF1Q9H501 851 aaKnown RBP29.44■■■□□ 2.3
GDNF-205ENST00000502572 MYT1LQ9UL68 1186 aa29.43■■■□□ 2.3
GDNF-205ENST00000502572 CDK11AQ9UQ88 783 aaPredicted RBP29.43■■■□□ 2.3
GDNF-205ENST00000502572 CNTLNQ9NXG0 1405 aa29.41■■■□□ 2.3
GDNF-205ENST00000502572 CAMSAP1Q5T5Y3 1602 aa29.4■■■□□ 2.3
GDNF-205ENST00000502572 CDC42BPBQ9Y5S2 1711 aa29.37■■■□□ 2.29
GDNF-205ENST00000502572 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
GDNF-205ENST00000502572 FMN1Q68DA7 1419 aa29.37■■■□□ 2.29
GDNF-205ENST00000502572 MROH2AA6NES4 1674 aa29.36■■■□□ 2.29
GDNF-205ENST00000502572 NPATQ14207 1427 aa29.36■■■□□ 2.29
GDNF-205ENST00000502572 UBAP1LF5GYI3 381 aa29.34■■■□□ 2.29
GDNF-205ENST00000502572 CLIP1P30622 1438 aa29.32■■■□□ 2.28
GDNF-205ENST00000502572 ATP1B4Q9UN42 357 aaPredicted RBP29.31■■■□□ 2.28
GDNF-205ENST00000502572 KIDINS220Q9ULH0 1771 aa29.31■■■□□ 2.28
GDNF-205ENST00000502572 ABCC1P33527 1531 aa29.3■■■□□ 2.28
GDNF-205ENST00000502572 ZNF335Q9H4Z2 1342 aaPredicted RBP29.3■■■□□ 2.28
GDNF-205ENST00000502572 ITSN2Q9NZM3 1697 aa29.3■■■□□ 2.28
GDNF-205ENST00000502572 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
GDNF-205ENST00000502572 ZNF142P52746 1687 aaPredicted RBP29.26■■■□□ 2.27
GDNF-205ENST00000502572 NCKAP5LQ9HCH0 1330 aa29.25■■■□□ 2.27
GDNF-205ENST00000502572 PLA2R1Q13018 1463 aa29.25■■■□□ 2.27
GDNF-205ENST00000502572 SUPT6HQ7KZ85 1726 aaKnown RBP29.23■■■□□ 2.27
GDNF-205ENST00000502572 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
GDNF-205ENST00000502572 PKD2Q13563 968 aa29.23■■■□□ 2.27
GDNF-205ENST00000502572 ZMYM3Q14202 1370 aa29.23■■■□□ 2.27
GDNF-205ENST00000502572 TCOF1Q13428 1488 aaKnown RBP29.2■■■□□ 2.26
GDNF-205ENST00000502572 MYO3AQ8NEV4 1616 aa29.2■■■□□ 2.26
GDNF-205ENST00000502572 MED1Q15648 1581 aaPredicted RBP29.19■■■□□ 2.26
GDNF-205ENST00000502572 ARHGAP35Q9NRY4 1499 aa29.19■■■□□ 2.26
GDNF-205ENST00000502572 CEP170BQ9Y4F5 1589 aaPredicted RBP29.15■■■□□ 2.26
GDNF-205ENST00000502572 CLTCQ00610 1675 aaKnown RBP29.14■■■□□ 2.26
GDNF-205ENST00000502572 SAMD9LQ8IVG5 1584 aa29.13■■■□□ 2.25
GDNF-205ENST00000502572 CDC42BPAQ5VT25 1732 aa29.13■■■□□ 2.25
GDNF-205ENST00000502572 PTPRKQ15262 1439 aa29.09■■■□□ 2.25
GDNF-205ENST00000502572 HSPA1LP34931 641 aa29.08■■■□□ 2.25
GDNF-205ENST00000502572 PPP6R1Q9UPN7 881 aa29.08■■■□□ 2.25
GDNF-205ENST00000502572 PLXNC1O60486 1568 aa29.05■■■□□ 2.24
GDNF-205ENST00000502572 UBTFP17480 764 aaKnown RBP29.03■■■□□ 2.24
GDNF-205ENST00000502572 CCDC18Q5T9S5 1454 aa29.03■■■□□ 2.24
GDNF-205ENST00000502572 TOM1O60784 492 aa29.02■■■□□ 2.24
GDNF-205ENST00000502572 CPS1P31327 1500 aa29.02■■■□□ 2.24
GDNF-205ENST00000502572 SPAG9O60271 1321 aaKnown RBP29.01■■■□□ 2.23
GDNF-205ENST00000502572 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
GDNF-205ENST00000502572 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
GDNF-205ENST00000502572 SYCP2Q9BX26 1530 aa28.99■■■□□ 2.23
GDNF-205ENST00000502572 PIP4K2BP78356 416 aa28.99■■■□□ 2.23
GDNF-205ENST00000502572 POLR1AO95602 1720 aaPredicted RBP28.99■■■□□ 2.23
GDNF-205ENST00000502572 DNMT1P26358 1616 aaKnown RBP28.98■■■□□ 2.23
GDNF-205ENST00000502572 A2ML1A8K2U0 1454 aa28.97■■■□□ 2.23
GDNF-205ENST00000502572 A2MP01023 1474 aa28.97■■■□□ 2.23
GDNF-205ENST00000502572 INO80Q9ULG1 1556 aaPredicted RBP28.97■■■□□ 2.23
GDNF-205ENST00000502572 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
GDNF-205ENST00000502572 SHANK2Q9UPX8 1470 aa28.93■■■□□ 2.22
GDNF-205ENST00000502572 ZNF777Q9ULD5 760 aaPredicted RBP28.92■■■□□ 2.22
GDNF-205ENST00000502572 NEURL4Q96JN8 1562 aa28.92■■■□□ 2.22
GDNF-205ENST00000502572 GGT6Q6P531 493 aa28.91■■■□□ 2.22
GDNF-205ENST00000502572 PHF23Q9BUL5 403 aaPredicted RBP28.91■■■□□ 2.22
GDNF-205ENST00000502572 KIAA1107Q9UPP5 1409 aa28.91■■■□□ 2.22
GDNF-205ENST00000502572 HNRNPMP52272 730 aaKnown RBP eCLIP28.9■■■□□ 2.22
GDNF-205ENST00000502572 ADGBQ8N7X0 1667 aa28.89■■■□□ 2.22
GDNF-205ENST00000502572 GPATCH8Q9UKJ3 1502 aaKnown RBP28.89■■■□□ 2.22
GDNF-205ENST00000502572 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
GDNF-205ENST00000502572 PLEKHH2Q8IVE3 1493 aa28.88■■■□□ 2.21
GDNF-205ENST00000502572 ALKQ9UM73 1620 aa28.85■■■□□ 2.21
GDNF-205ENST00000502572 VWDEQ8N2E2 1590 aa28.83■■■□□ 2.21
GDNF-205ENST00000502572 FYCO1Q9BQS8 1478 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms