RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
CCDC171-209ENST00000498725 YEATS2Q9ULM3 1422 aa15.44■□□□□ 0.06
CCDC171-209ENST00000498725 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
CCDC171-209ENST00000498725 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
CCDC171-209ENST00000498725 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
CCDC171-209ENST00000498725 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
CCDC171-209ENST00000498725 ZMYM4Q5VZL5 1548 aa15.41■□□□□ 0.06
CCDC171-209ENST00000498725 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
CCDC171-209ENST00000498725 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
CCDC171-209ENST00000498725 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
CCDC171-209ENST00000498725 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
CCDC171-209ENST00000498725 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
CCDC171-209ENST00000498725 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
CCDC171-209ENST00000498725 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
CCDC171-209ENST00000498725 MAGI2Q86UL8 1455 aa15.33■□□□□ 0.05
CCDC171-209ENST00000498725 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
CCDC171-209ENST00000498725 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
CCDC171-209ENST00000498725 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
CCDC171-209ENST00000498725 ATP10AO60312 1499 aa15.31■□□□□ 0.04
CCDC171-209ENST00000498725 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
CCDC171-209ENST00000498725 PLCH2O75038 1416 aa15.3■□□□□ 0.04
CCDC171-209ENST00000498725 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
CCDC171-209ENST00000498725 KIF14Q15058 1648 aa15.29■□□□□ 0.04
CCDC171-209ENST00000498725 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
CCDC171-209ENST00000498725 EEA1Q15075 1411 aa15.27■□□□□ 0.04
CCDC171-209ENST00000498725 EFCAB2Q5VUJ9 269 aa15.27■□□□□ 0.04
CCDC171-209ENST00000498725 C3P01024 1663 aa15.25■□□□□ 0.03
CCDC171-209ENST00000498725 ARHGAP5Q13017 1502 aa15.25■□□□□ 0.03
CCDC171-209ENST00000498725 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
CCDC171-209ENST00000498725 LRRIQ1Q96JM4 1722 aa15.24■□□□□ 0.03
CCDC171-209ENST00000498725 AFAP1Q8N556 730 aa15.24■□□□□ 0.03
CCDC171-209ENST00000498725 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
CCDC171-209ENST00000498725 ZNF518AQ6AHZ1 1483 aa15.22■□□□□ 0.03
CCDC171-209ENST00000498725 ABCA6Q8N139 1617 aa15.22■□□□□ 0.03
CCDC171-209ENST00000498725 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
CCDC171-209ENST00000498725 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
CCDC171-209ENST00000498725 SPATA31D1Q6ZQQ2 1576 aa15.21■□□□□ 0.03
CCDC171-209ENST00000498725 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
CCDC171-209ENST00000498725 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.03
CCDC171-209ENST00000498725 KDM5CP41229 1560 aa15.19■□□□□ 0.02
CCDC171-209ENST00000498725 SOCS7O14512 581 aa15.19■□□□□ 0.02
CCDC171-209ENST00000498725 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
CCDC171-209ENST00000498725 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
CCDC171-209ENST00000498725 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
CCDC171-209ENST00000498725 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
CCDC171-209ENST00000498725 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
CCDC171-209ENST00000498725 CLIP1P30622 1438 aa15.16■□□□□ 0.02
CCDC171-209ENST00000498725 TROQ12816 1431 aaPredicted RBP15.16■□□□□ 0.02
CCDC171-209ENST00000498725 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
CCDC171-209ENST00000498725 PTPRTO14522 1441 aa15.14■□□□□ 0.01
CCDC171-209ENST00000498725 SUPT6HQ7KZ85 1726 aaKnown RBP15.13■□□□□ 0.01
CCDC171-209ENST00000498725 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
CCDC171-209ENST00000498725 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
CCDC171-209ENST00000498725 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
CCDC171-209ENST00000498725 TRAPPC8Q9Y2L5 1435 aa15.12■□□□□ 0.01
CCDC171-209ENST00000498725 ABCC1P33527 1531 aa15.12■□□□□ 0.01
CCDC171-209ENST00000498725 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
CCDC171-209ENST00000498725 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
CCDC171-209ENST00000498725 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
CCDC171-209ENST00000498725 AGLP35573 1532 aa15.08■□□□□ 0.01
CCDC171-209ENST00000498725 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
CCDC171-209ENST00000498725 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0
CCDC171-209ENST00000498725 NCOA1Q15788 1441 aa15.08■□□□□ 0
CCDC171-209ENST00000498725 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
CCDC171-209ENST00000498725 MROH2AA6NES4 1674 aa15.06■□□□□ 0
CCDC171-209ENST00000498725 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
CCDC171-209ENST00000498725 CNTLNQ9NXG0 1405 aa15.04■□□□□ -0
CCDC171-209ENST00000498725 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
CCDC171-209ENST00000498725 UBAP1LF5GYI3 381 aa15.03■□□□□ -0
CCDC171-209ENST00000498725 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
CCDC171-209ENST00000498725 SYCP2Q9BX26 1530 aa15.02■□□□□ -0
CCDC171-209ENST00000498725 IQSEC2Q5JU85 1478 aa15.02■□□□□ -0
CCDC171-209ENST00000498725 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
CCDC171-209ENST00000498725 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC171-209ENST00000498725 ZMYM3Q14202 1370 aa15□□□□□ -0.01
CCDC171-209ENST00000498725 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
CCDC171-209ENST00000498725 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
CCDC171-209ENST00000498725 NPATQ14207 1427 aa14.99□□□□□ -0.01
CCDC171-209ENST00000498725 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
CCDC171-209ENST00000498725 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
CCDC171-209ENST00000498725 CASKIN1Q8WXD9 1431 aa14.98□□□□□ -0.01
CCDC171-209ENST00000498725 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
CCDC171-209ENST00000498725 GGT6Q6P531 493 aa14.97□□□□□ -0.01
CCDC171-209ENST00000498725 INO80Q9ULG1 1556 aaPredicted RBP14.95□□□□□ -0.02
CCDC171-209ENST00000498725 A2MP01023 1474 aa14.94□□□□□ -0.02
CCDC171-209ENST00000498725 GPATCH8Q9UKJ3 1502 aaKnown RBP14.93□□□□□ -0.02
CCDC171-209ENST00000498725 PIP4K2BP78356 416 aa14.93□□□□□ -0.02
CCDC171-209ENST00000498725 PLXNC1O60486 1568 aa14.93□□□□□ -0.02
CCDC171-209ENST00000498725 ADGBQ8N7X0 1667 aa14.93□□□□□ -0.02
CCDC171-209ENST00000498725 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
CCDC171-209ENST00000498725 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-209ENST00000498725 PKD2Q13563 968 aa14.92□□□□□ -0.02
CCDC171-209ENST00000498725 FYCO1Q9BQS8 1478 aa14.92□□□□□ -0.02
CCDC171-209ENST00000498725 PLA2R1Q13018 1463 aa14.91□□□□□ -0.02
CCDC171-209ENST00000498725 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
CCDC171-209ENST00000498725 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
CCDC171-209ENST00000498725 DNMT1P26358 1616 aaKnown RBP14.9□□□□□ -0.02
CCDC171-209ENST00000498725 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
CCDC171-209ENST00000498725 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
CCDC171-209ENST00000498725 HSPA1LP34931 641 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms