RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
TSPAN1-209ENST00000498443 FANCAO15360 1455 aa15.88■□□□□ 0.13
TSPAN1-209ENST00000498443 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
TSPAN1-209ENST00000498443 FER1L4A9Z1Z3 1794 aa15.86■□□□□ 0.13
TSPAN1-209ENST00000498443 SPATA31D1Q6ZQQ2 1576 aa15.86■□□□□ 0.13
TSPAN1-209ENST00000498443 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
TSPAN1-209ENST00000498443 RICTORQ6R327 1708 aa15.85■□□□□ 0.13
TSPAN1-209ENST00000498443 SIGLEC1Q9BZZ2 1709 aa15.85■□□□□ 0.13
TSPAN1-209ENST00000498443 HECW1Q76N89 1606 aa15.84■□□□□ 0.13
TSPAN1-209ENST00000498443 YEATS2Q9ULM3 1422 aa15.84■□□□□ 0.13
TSPAN1-209ENST00000498443 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
TSPAN1-209ENST00000498443 CEBPAP49715 358 aaPredicted RBP15.82■□□□□ 0.12
TSPAN1-209ENST00000498443 KIF14Q15058 1648 aa15.79■□□□□ 0.12
TSPAN1-209ENST00000498443 HRCP23327 699 aa15.79■□□□□ 0.12
TSPAN1-209ENST00000498443 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
TSPAN1-209ENST00000498443 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
TSPAN1-209ENST00000498443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
TSPAN1-209ENST00000498443 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
TSPAN1-209ENST00000498443 TTC37Q6PGP7 1564 aa15.78■□□□□ 0.12
TSPAN1-209ENST00000498443 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
TSPAN1-209ENST00000498443 TROQ12816 1431 aaPredicted RBP15.76■□□□□ 0.11
TSPAN1-209ENST00000498443 VPS8Q8N3P4 1428 aa15.76■□□□□ 0.11
TSPAN1-209ENST00000498443 ZMYM4Q5VZL5 1548 aa15.75■□□□□ 0.11
TSPAN1-209ENST00000498443 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
TSPAN1-209ENST00000498443 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
TSPAN1-209ENST00000498443 TRIM26Q12899 539 aaPredicted RBP15.74■□□□□ 0.11
TSPAN1-209ENST00000498443 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
TSPAN1-209ENST00000498443 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
TSPAN1-209ENST00000498443 CDK11AQ9UQ88 783 aaPredicted RBP15.73■□□□□ 0.11
TSPAN1-209ENST00000498443 UHRF1BP1Q6BDS2 1440 aa15.71■□□□□ 0.11
TSPAN1-209ENST00000498443 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
TSPAN1-209ENST00000498443 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
TSPAN1-209ENST00000498443 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.1
TSPAN1-209ENST00000498443 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
TSPAN1-209ENST00000498443 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
TSPAN1-209ENST00000498443 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
TSPAN1-209ENST00000498443 ATP10AO60312 1499 aa15.68■□□□□ 0.1
TSPAN1-209ENST00000498443 MTUS2Q5JR59 1369 aa15.67■□□□□ 0.1
TSPAN1-209ENST00000498443 PLCH2O75038 1416 aa15.66■□□□□ 0.1
TSPAN1-209ENST00000498443 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
TSPAN1-209ENST00000498443 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
TSPAN1-209ENST00000498443 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
TSPAN1-209ENST00000498443 ESF1Q9H501 851 aaKnown RBP15.63■□□□□ 0.09
TSPAN1-209ENST00000498443 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
TSPAN1-209ENST00000498443 CDC42BPBQ9Y5S2 1711 aa15.61■□□□□ 0.09
TSPAN1-209ENST00000498443 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
TSPAN1-209ENST00000498443 PTPRTO14522 1441 aa15.6■□□□□ 0.09
TSPAN1-209ENST00000498443 LRRC9Q6ZRR7 1453 aa15.6■□□□□ 0.09
TSPAN1-209ENST00000498443 AFAP1Q8N556 730 aa15.6■□□□□ 0.09
TSPAN1-209ENST00000498443 LTBP4Q8N2S1 1624 aa15.6■□□□□ 0.09
TSPAN1-209ENST00000498443 C3P01024 1663 aa15.6■□□□□ 0.09
TSPAN1-209ENST00000498443 ARHGAP5Q13017 1502 aa15.59■□□□□ 0.09
TSPAN1-209ENST00000498443 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
TSPAN1-209ENST00000498443 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
TSPAN1-209ENST00000498443 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
TSPAN1-209ENST00000498443 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
TSPAN1-209ENST00000498443 SETD1BQ9UPS6 1966 aaKnown RBP15.58■□□□□ 0.08
TSPAN1-209ENST00000498443 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
TSPAN1-209ENST00000498443 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
TSPAN1-209ENST00000498443 EHBP1L1Q8N3D4 1523 aa15.57■□□□□ 0.08
TSPAN1-209ENST00000498443 CFDP1Q9UEE9 299 aaPredicted RBP15.56■□□□□ 0.08
TSPAN1-209ENST00000498443 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
TSPAN1-209ENST00000498443 TRAPPC8Q9Y2L5 1435 aa15.56■□□□□ 0.08
TSPAN1-209ENST00000498443 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
TSPAN1-209ENST00000498443 ZNF518AQ6AHZ1 1483 aa15.54■□□□□ 0.08
TSPAN1-209ENST00000498443 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
TSPAN1-209ENST00000498443 APLP2Q06481 763 aa15.54■□□□□ 0.08
TSPAN1-209ENST00000498443 DIP2CQ9Y2E4 1556 aa15.53■□□□□ 0.08
TSPAN1-209ENST00000498443 ZNF335Q9H4Z2 1342 aaPredicted RBP15.53■□□□□ 0.08
TSPAN1-209ENST00000498443 NCKAP5LQ9HCH0 1330 aa15.53■□□□□ 0.08
TSPAN1-209ENST00000498443 SAMD9LQ8IVG5 1584 aa15.53■□□□□ 0.08
TSPAN1-209ENST00000498443 IQSEC2Q5JU85 1478 aa15.52■□□□□ 0.08
TSPAN1-209ENST00000498443 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
TSPAN1-209ENST00000498443 CAMSAP1Q5T5Y3 1602 aa15.52■□□□□ 0.08
TSPAN1-209ENST00000498443 ABCA6Q8N139 1617 aa15.51■□□□□ 0.07
TSPAN1-209ENST00000498443 MAP3K1Q13233 1512 aa15.51■□□□□ 0.07
TSPAN1-209ENST00000498443 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
TSPAN1-209ENST00000498443 KDM5CP41229 1560 aa15.49■□□□□ 0.07
TSPAN1-209ENST00000498443 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
TSPAN1-209ENST00000498443 ABCC1P33527 1531 aa15.47■□□□□ 0.07
TSPAN1-209ENST00000498443 SYCP2Q9BX26 1530 aa15.47■□□□□ 0.07
TSPAN1-209ENST00000498443 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
TSPAN1-209ENST00000498443 HSPA1LP34931 641 aa15.44■□□□□ 0.06
TSPAN1-209ENST00000498443 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
TSPAN1-209ENST00000498443 MED1Q15648 1581 aaPredicted RBP15.44■□□□□ 0.06
TSPAN1-209ENST00000498443 REREQ9P2R6 1566 aa15.44■□□□□ 0.06
TSPAN1-209ENST00000498443 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
TSPAN1-209ENST00000498443 MBD5Q9P267 1494 aa15.43■□□□□ 0.06
TSPAN1-209ENST00000498443 CAMSAP2Q08AD1 1489 aa15.42■□□□□ 0.06
TSPAN1-209ENST00000498443 MYOM3Q5VTT5 1437 aa15.42■□□□□ 0.06
TSPAN1-209ENST00000498443 CNTLNQ9NXG0 1405 aa15.42■□□□□ 0.06
TSPAN1-209ENST00000498443 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
TSPAN1-209ENST00000498443 AGLP35573 1532 aa15.41■□□□□ 0.06
TSPAN1-209ENST00000498443 SPAG9O60271 1321 aaKnown RBP15.4■□□□□ 0.06
TSPAN1-209ENST00000498443 ZMYM3Q14202 1370 aa15.39■□□□□ 0.05
TSPAN1-209ENST00000498443 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
TSPAN1-209ENST00000498443 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
TSPAN1-209ENST00000498443 KIDINS220Q9ULH0 1771 aa15.38■□□□□ 0.05
TSPAN1-209ENST00000498443 MYO3AQ8NEV4 1616 aa15.38■□□□□ 0.05
TSPAN1-209ENST00000498443 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms