RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
CDK9-205ENST00000498339 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
CDK9-205ENST00000498339 SCAPERQ9BY12 1400 aa19.62■□□□□ 0.73
CDK9-205ENST00000498339 EEA1Q15075 1411 aa19.61■□□□□ 0.73
CDK9-205ENST00000498339 ARHGEF12Q9NZN5 1544 aa19.6■□□□□ 0.73
CDK9-205ENST00000498339 C9orf84Q5VXU9 1444 aa19.59■□□□□ 0.73
CDK9-205ENST00000498339 ATP10AO60312 1499 aa19.57■□□□□ 0.72
CDK9-205ENST00000498339 PLCH2O75038 1416 aa19.57■□□□□ 0.72
CDK9-205ENST00000498339 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
CDK9-205ENST00000498339 STRCQ7RTU9 1775 aa19.55■□□□□ 0.72
CDK9-205ENST00000498339 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
CDK9-205ENST00000498339 KIF14Q15058 1648 aa19.54■□□□□ 0.72
CDK9-205ENST00000498339 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
CDK9-205ENST00000498339 CEBPAP49715 358 aaPredicted RBP19.52■□□□□ 0.72
CDK9-205ENST00000498339 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
CDK9-205ENST00000498339 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
CDK9-205ENST00000498339 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
CDK9-205ENST00000498339 EFCAB2Q5VUJ9 269 aa19.5■□□□□ 0.71
CDK9-205ENST00000498339 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
CDK9-205ENST00000498339 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
CDK9-205ENST00000498339 C3P01024 1663 aa19.48■□□□□ 0.71
CDK9-205ENST00000498339 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
CDK9-205ENST00000498339 KDM5CP41229 1560 aa19.47■□□□□ 0.71
CDK9-205ENST00000498339 DIP2CQ9Y2E4 1556 aa19.47■□□□□ 0.71
CDK9-205ENST00000498339 SPATA31D1Q6ZQQ2 1576 aa19.46■□□□□ 0.71
CDK9-205ENST00000498339 FMN1Q68DA7 1419 aa19.46■□□□□ 0.71
CDK9-205ENST00000498339 CDK11AQ9UQ88 783 aaPredicted RBP19.46■□□□□ 0.71
CDK9-205ENST00000498339 ABCA6Q8N139 1617 aa19.45■□□□□ 0.7
CDK9-205ENST00000498339 CLIP1P30622 1438 aa19.44■□□□□ 0.7
CDK9-205ENST00000498339 LRRIQ1Q96JM4 1722 aa19.42■□□□□ 0.7
CDK9-205ENST00000498339 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
CDK9-205ENST00000498339 ILDR2Q71H61 639 aa19.42■□□□□ 0.7
CDK9-205ENST00000498339 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
CDK9-205ENST00000498339 REREQ9P2R6 1566 aa19.41■□□□□ 0.7
CDK9-205ENST00000498339 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
CDK9-205ENST00000498339 AFAP1Q8N556 730 aa19.41■□□□□ 0.7
CDK9-205ENST00000498339 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
CDK9-205ENST00000498339 ITSN2Q9NZM3 1697 aa19.4■□□□□ 0.7
CDK9-205ENST00000498339 PREX2Q70Z35 1606 aa19.39■□□□□ 0.69
CDK9-205ENST00000498339 SOCS7O14512 581 aa19.38■□□□□ 0.69
CDK9-205ENST00000498339 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
CDK9-205ENST00000498339 PTPRTO14522 1441 aa19.36■□□□□ 0.69
CDK9-205ENST00000498339 ABCC1P33527 1531 aa19.35■□□□□ 0.69
CDK9-205ENST00000498339 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
CDK9-205ENST00000498339 AGLP35573 1532 aa19.33■□□□□ 0.68
CDK9-205ENST00000498339 SUPT6HQ7KZ85 1726 aaKnown RBP19.33■□□□□ 0.68
CDK9-205ENST00000498339 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
CDK9-205ENST00000498339 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
CDK9-205ENST00000498339 LTBP4Q8N2S1 1624 aa19.31■□□□□ 0.68
CDK9-205ENST00000498339 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
CDK9-205ENST00000498339 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
CDK9-205ENST00000498339 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
CDK9-205ENST00000498339 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
CDK9-205ENST00000498339 NCOA1Q15788 1441 aa19.29■□□□□ 0.68
CDK9-205ENST00000498339 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
CDK9-205ENST00000498339 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
CDK9-205ENST00000498339 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
CDK9-205ENST00000498339 MYO3AQ8NEV4 1616 aa19.23■□□□□ 0.67
CDK9-205ENST00000498339 SAMD9LQ8IVG5 1584 aa19.23■□□□□ 0.67
CDK9-205ENST00000498339 SYCP2Q9BX26 1530 aa19.21■□□□□ 0.67
CDK9-205ENST00000498339 ZNF142P52746 1687 aaPredicted RBP19.21■□□□□ 0.67
CDK9-205ENST00000498339 NPATQ14207 1427 aa19.21■□□□□ 0.67
CDK9-205ENST00000498339 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
CDK9-205ENST00000498339 CASKIN1Q8WXD9 1431 aa19.18■□□□□ 0.66
CDK9-205ENST00000498339 NCKAP5LQ9HCH0 1330 aa19.17■□□□□ 0.66
CDK9-205ENST00000498339 ATP7AQ04656 1500 aa19.16■□□□□ 0.66
CDK9-205ENST00000498339 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
CDK9-205ENST00000498339 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
CDK9-205ENST00000498339 SPAG9O60271 1321 aaKnown RBP19.16■□□□□ 0.66
CDK9-205ENST00000498339 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
CDK9-205ENST00000498339 ZMYM3Q14202 1370 aa19.16■□□□□ 0.66
CDK9-205ENST00000498339 INO80Q9ULG1 1556 aaPredicted RBP19.14■□□□□ 0.65
CDK9-205ENST00000498339 FYCO1Q9BQS8 1478 aa19.13■□□□□ 0.65
CDK9-205ENST00000498339 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
CDK9-205ENST00000498339 PLA2R1Q13018 1463 aa19.12■□□□□ 0.65
CDK9-205ENST00000498339 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
CDK9-205ENST00000498339 A2MP01023 1474 aa19.1■□□□□ 0.65
CDK9-205ENST00000498339 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDK9-205ENST00000498339 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
CDK9-205ENST00000498339 PKD2Q13563 968 aa19.09■□□□□ 0.65
CDK9-205ENST00000498339 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
CDK9-205ENST00000498339 PLEKHH2Q8IVE3 1493 aa19.09■□□□□ 0.65
CDK9-205ENST00000498339 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
CDK9-205ENST00000498339 GGT6Q6P531 493 aa19.08■□□□□ 0.64
CDK9-205ENST00000498339 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.64
CDK9-205ENST00000498339 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
CDK9-205ENST00000498339 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
CDK9-205ENST00000498339 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
CDK9-205ENST00000498339 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
CDK9-205ENST00000498339 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
CDK9-205ENST00000498339 KIAA1107Q9UPP5 1409 aa19.03■□□□□ 0.64
CDK9-205ENST00000498339 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
CDK9-205ENST00000498339 PIP4K2BP78356 416 aa19.01■□□□□ 0.63
CDK9-205ENST00000498339 A2ML1A8K2U0 1454 aa19.01■□□□□ 0.63
CDK9-205ENST00000498339 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
CDK9-205ENST00000498339 CPS1P31327 1500 aa18.98■□□□□ 0.63
CDK9-205ENST00000498339 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
CDK9-205ENST00000498339 TIAM1Q13009 1591 aa18.97■□□□□ 0.63
CDK9-205ENST00000498339 NEURL4Q96JN8 1562 aa18.97■□□□□ 0.63
CDK9-205ENST00000498339 TOM1O60784 492 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms