RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
HLA-DMB-262ENST00000498020 HECW1Q76N89 1606 aa11.04□□□□□ -0.64
HLA-DMB-262ENST00000498020 MPHOSPH9Q99550 1183 aa11.04□□□□□ -0.64
HLA-DMB-262ENST00000498020 HFM1A2PYH4 1435 aa11.04□□□□□ -0.64
HLA-DMB-262ENST00000498020 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
HLA-DMB-262ENST00000498020 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
HLA-DMB-262ENST00000498020 EPRSP07814 1512 aaKnown RBP11.02□□□□□ -0.64
HLA-DMB-262ENST00000498020 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
HLA-DMB-262ENST00000498020 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
HLA-DMB-262ENST00000498020 GRIN2AQ12879 1464 aa11□□□□□ -0.65
HLA-DMB-262ENST00000498020 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
HLA-DMB-262ENST00000498020 ANKRD30AQ9BXX3 1397 aa10.99□□□□□ -0.65
HLA-DMB-262ENST00000498020 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
HLA-DMB-262ENST00000498020 SYNJ2O15056 1496 aa10.98□□□□□ -0.65
HLA-DMB-262ENST00000498020 NAIPQ13075 1403 aa10.98□□□□□ -0.65
HLA-DMB-262ENST00000498020 TARBP1Q13395 1621 aaKnown RBP10.97□□□□□ -0.65
HLA-DMB-262ENST00000498020 PTPRGP23470 1445 aa10.97□□□□□ -0.65
HLA-DMB-262ENST00000498020 SAMD9Q5K651 1589 aa10.96□□□□□ -0.65
HLA-DMB-262ENST00000498020 CDK13Q14004 1512 aaKnown RBP10.96□□□□□ -0.65
HLA-DMB-262ENST00000498020 TROQ12816 1431 aaPredicted RBP10.96□□□□□ -0.66
HLA-DMB-262ENST00000498020 UGGT2Q9NYU1 1516 aa10.96□□□□□ -0.66
HLA-DMB-262ENST00000498020 CCER2I3L3R5 266 aa10.95□□□□□ -0.66
HLA-DMB-262ENST00000498020 FOXD1Q16676 465 aa10.95□□□□□ -0.66
HLA-DMB-262ENST00000498020 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
HLA-DMB-262ENST00000498020 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
HLA-DMB-262ENST00000498020 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
HLA-DMB-262ENST00000498020 L3MBTL2Q969R5 705 aa10.94□□□□□ -0.66
HLA-DMB-262ENST00000498020 RGL3Q3MIN7 710 aa10.94□□□□□ -0.66
HLA-DMB-262ENST00000498020 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
HLA-DMB-262ENST00000498020 WDR97A6NE52 1622 aa10.93□□□□□ -0.66
HLA-DMB-262ENST00000498020 PTPN23Q9H3S7 1636 aa10.93□□□□□ -0.66
HLA-DMB-262ENST00000498020 EIF4G3O43432 1585 aaKnown RBP10.93□□□□□ -0.66
HLA-DMB-262ENST00000498020 PKD2Q13563 968 aa10.93□□□□□ -0.66
HLA-DMB-262ENST00000498020 MAPKBP1O60336 1514 aa10.93□□□□□ -0.66
HLA-DMB-262ENST00000498020 CCDC9Q9Y3X0 531 aaKnown RBP10.92□□□□□ -0.66
HLA-DMB-262ENST00000498020 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
HLA-DMB-262ENST00000498020 ROCK1Q13464 1354 aa10.91□□□□□ -0.66
HLA-DMB-262ENST00000498020 PTPRKQ15262 1439 aa10.91□□□□□ -0.66
HLA-DMB-262ENST00000498020 AKNAQ7Z591 1439 aa10.9□□□□□ -0.66
HLA-DMB-262ENST00000498020 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
HLA-DMB-262ENST00000498020 NUP155O75694 1391 aa10.9□□□□□ -0.66
HLA-DMB-262ENST00000498020 DAPK1P53355 1430 aa10.9□□□□□ -0.67
HLA-DMB-262ENST00000498020 HNRNPUQ00839 825 aaKnown RBP eCLIP10.89□□□□□ -0.67
HLA-DMB-262ENST00000498020 HNRNPMP52272 730 aaKnown RBP eCLIP10.89□□□□□ -0.67
HLA-DMB-262ENST00000498020 EFCAB2Q5VUJ9 269 aa10.89□□□□□ -0.67
HLA-DMB-262ENST00000498020 TCOF1Q13428 1488 aaKnown RBP10.88□□□□□ -0.67
HLA-DMB-262ENST00000498020 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
HLA-DMB-262ENST00000498020 BCL11AQ9H165 835 aa10.87□□□□□ -0.67
HLA-DMB-262ENST00000498020 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
HLA-DMB-262ENST00000498020 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
HLA-DMB-262ENST00000498020 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
HLA-DMB-262ENST00000498020 MRS2Q9HD23 443 aa10.86□□□□□ -0.67
HLA-DMB-262ENST00000498020 ABCC5O15440 1437 aa10.86□□□□□ -0.67
HLA-DMB-262ENST00000498020 DISP1Q96F81 1524 aa10.85□□□□□ -0.67
HLA-DMB-262ENST00000498020 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
HLA-DMB-262ENST00000498020 ANKRD50Q9ULJ7 1429 aa10.85□□□□□ -0.67
HLA-DMB-262ENST00000498020 FKBP8Q14318 412 aa10.85□□□□□ -0.67
HLA-DMB-262ENST00000498020 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
HLA-DMB-262ENST00000498020 RAPGEF6Q8TEU7 1601 aa10.84□□□□□ -0.67
HLA-DMB-262ENST00000498020 NEFMP07197 916 aa10.84□□□□□ -0.67
HLA-DMB-262ENST00000498020 ARXQ96QS3 562 aa10.84□□□□□ -0.67
HLA-DMB-262ENST00000498020 FAM9BQ8IZU0 186 aa10.84□□□□□ -0.67
HLA-DMB-262ENST00000498020 NUP160Q12769 1436 aa10.83□□□□□ -0.68
HLA-DMB-262ENST00000498020 KIF3BO15066 747 aa10.82□□□□□ -0.68
HLA-DMB-262ENST00000498020 DCAF11Q8TEB1 546 aa10.82□□□□□ -0.68
HLA-DMB-262ENST00000498020 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
HLA-DMB-262ENST00000498020 SOX12O15370 315 aa10.81□□□□□ -0.68
HLA-DMB-262ENST00000498020 KIF15Q9NS87 1388 aa10.81□□□□□ -0.68
HLA-DMB-262ENST00000498020 CAMSAP2Q08AD1 1489 aa10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 MAGI3Q5TCQ9 1506 aa10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 PIP4K2BP78356 416 aa10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 POGKQ9P215 609 aa10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 GPATCH8Q9UKJ3 1502 aaKnown RBP10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
HLA-DMB-262ENST00000498020 EID1Q9Y6B2 187 aa10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 NCOA1Q15788 1441 aa10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
HLA-DMB-262ENST00000498020 KIAA1107Q9UPP5 1409 aa10.78□□□□□ -0.68
HLA-DMB-262ENST00000498020 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
HLA-DMB-262ENST00000498020 NUTM2DQ5VT03 806 aaPredicted RBP10.77□□□□□ -0.68
HLA-DMB-262ENST00000498020 WASHC2CQ9Y4E1 1318 aa10.77□□□□□ -0.68
HLA-DMB-262ENST00000498020 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
HLA-DMB-262ENST00000498020 ATP10BO94823 1461 aa10.77□□□□□ -0.69
HLA-DMB-262ENST00000498020 STK26Q9P289 416 aa10.76□□□□□ -0.69
HLA-DMB-262ENST00000498020 KIF14Q15058 1648 aa10.76□□□□□ -0.69
HLA-DMB-262ENST00000498020 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
HLA-DMB-262ENST00000498020 SPAG9O60271 1321 aaKnown RBP10.75□□□□□ -0.69
HLA-DMB-262ENST00000498020 NBPF8Q3BBV2 869 aa10.75□□□□□ -0.69
HLA-DMB-262ENST00000498020 CEP170Q5SW79 1584 aa10.75□□□□□ -0.69
HLA-DMB-262ENST00000498020 CCDC7Q96M83 1385 aa10.75□□□□□ -0.69
HLA-DMB-262ENST00000498020 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
HLA-DMB-262ENST00000498020 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
HLA-DMB-262ENST00000498020 KANK1Q14678 1352 aa10.73□□□□□ -0.69
HLA-DMB-262ENST00000498020 CCDC144AA2RUR9 1427 aa10.73□□□□□ -0.69
HLA-DMB-262ENST00000498020 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms