RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
NXF3-207ENST00000497850 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
NXF3-207ENST00000497850 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
NXF3-207ENST00000497850 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
NXF3-207ENST00000497850 ANP32CO43423 234 aa18.12■□□□□ 0.49
NXF3-207ENST00000497850 DAPK1P53355 1430 aa18.12■□□□□ 0.49
NXF3-207ENST00000497850 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
NXF3-207ENST00000497850 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
NXF3-207ENST00000497850 ABCC5O15440 1437 aa18.09■□□□□ 0.49
NXF3-207ENST00000497850 AKNAQ7Z591 1439 aa18.09■□□□□ 0.49
NXF3-207ENST00000497850 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
NXF3-207ENST00000497850 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
NXF3-207ENST00000497850 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
NXF3-207ENST00000497850 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
NXF3-207ENST00000497850 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
NXF3-207ENST00000497850 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
NXF3-207ENST00000497850 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
NXF3-207ENST00000497850 KIF14Q15058 1648 aa18.04■□□□□ 0.48
NXF3-207ENST00000497850 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
NXF3-207ENST00000497850 JPH4Q96JJ6 628 aa18.02■□□□□ 0.48
NXF3-207ENST00000497850 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.47
NXF3-207ENST00000497850 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
NXF3-207ENST00000497850 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
NXF3-207ENST00000497850 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
NXF3-207ENST00000497850 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
NXF3-207ENST00000497850 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
NXF3-207ENST00000497850 ROCK1Q13464 1354 aa18■□□□□ 0.47
NXF3-207ENST00000497850 NEFLP07196 543 aa17.99■□□□□ 0.47
NXF3-207ENST00000497850 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
NXF3-207ENST00000497850 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
NXF3-207ENST00000497850 EIF4G2P78344 907 aaKnown RBP eCLIP17.97■□□□□ 0.47
NXF3-207ENST00000497850 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
NXF3-207ENST00000497850 CARMIL2Q6F5E8 1435 aa17.96■□□□□ 0.47
NXF3-207ENST00000497850 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.46
NXF3-207ENST00000497850 NUP160Q12769 1436 aa17.95■□□□□ 0.46
NXF3-207ENST00000497850 C11orf95C9JLR9 678 aaPredicted RBP17.95■□□□□ 0.46
NXF3-207ENST00000497850 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
NXF3-207ENST00000497850 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
NXF3-207ENST00000497850 PZPP20742 1482 aa17.91■□□□□ 0.46
NXF3-207ENST00000497850 ADGBQ8N7X0 1667 aa17.91■□□□□ 0.46
NXF3-207ENST00000497850 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
NXF3-207ENST00000497850 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
NXF3-207ENST00000497850 ADCY10Q96PN6 1610 aa17.91■□□□□ 0.46
NXF3-207ENST00000497850 TEX14Q8IWB6 1497 aa17.91■□□□□ 0.46
NXF3-207ENST00000497850 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.45
NXF3-207ENST00000497850 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
NXF3-207ENST00000497850 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
NXF3-207ENST00000497850 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
NXF3-207ENST00000497850 ATP10BO94823 1461 aa17.87■□□□□ 0.45
NXF3-207ENST00000497850 CCDC184Q52MB2 194 aa17.87■□□□□ 0.45
NXF3-207ENST00000497850 ABCA8O94911 1581 aa17.87■□□□□ 0.45
NXF3-207ENST00000497850 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
NXF3-207ENST00000497850 PKD2Q13563 968 aa17.86■□□□□ 0.45
NXF3-207ENST00000497850 DEKP35659 375 aaKnown RBP17.85■□□□□ 0.45
NXF3-207ENST00000497850 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
NXF3-207ENST00000497850 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
NXF3-207ENST00000497850 ANKRD30AQ9BXX3 1397 aa17.84■□□□□ 0.45
NXF3-207ENST00000497850 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.45
NXF3-207ENST00000497850 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.44
NXF3-207ENST00000497850 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
NXF3-207ENST00000497850 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
NXF3-207ENST00000497850 ANKRD50Q9ULJ7 1429 aa17.82■□□□□ 0.44
NXF3-207ENST00000497850 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
NXF3-207ENST00000497850 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
NXF3-207ENST00000497850 KIF7Q2M1P5 1343 aa17.8■□□□□ 0.44
NXF3-207ENST00000497850 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
NXF3-207ENST00000497850 NUP155O75694 1391 aa17.78■□□□□ 0.44
NXF3-207ENST00000497850 PTPRGP23470 1445 aa17.78■□□□□ 0.44
NXF3-207ENST00000497850 SPATA31E1Q6ZUB1 1445 aa17.77■□□□□ 0.43
NXF3-207ENST00000497850 FAM9BQ8IZU0 186 aa17.76■□□□□ 0.43
NXF3-207ENST00000497850 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
NXF3-207ENST00000497850 CHD1O14646 1710 aa17.76■□□□□ 0.43
NXF3-207ENST00000497850 TSPY4P0CV99 314 aa17.75■□□□□ 0.43
NXF3-207ENST00000497850 TSPY10P0CW01 314 aa17.75■□□□□ 0.43
NXF3-207ENST00000497850 IRX6P78412 446 aaPredicted RBP17.75■□□□□ 0.43
NXF3-207ENST00000497850 ANO8Q9HCE9 1232 aaPredicted RBP17.75■□□□□ 0.43
NXF3-207ENST00000497850 MBD5Q9P267 1494 aa17.73■□□□□ 0.43
NXF3-207ENST00000497850 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
NXF3-207ENST00000497850 KDM2AQ9Y2K7 1162 aa17.73■□□□□ 0.43
NXF3-207ENST00000497850 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
NXF3-207ENST00000497850 KIF15Q9NS87 1388 aa17.72■□□□□ 0.43
NXF3-207ENST00000497850 BCORL1Q5H9F3 1711 aa17.71■□□□□ 0.43
NXF3-207ENST00000497850 CDC42BPBQ9Y5S2 1711 aa17.71■□□□□ 0.43
NXF3-207ENST00000497850 USP47Q96K76 1375 aa17.71■□□□□ 0.43
NXF3-207ENST00000497850 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
NXF3-207ENST00000497850 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
NXF3-207ENST00000497850 ERCC6L2Q5T890 1561 aa17.68■□□□□ 0.42
NXF3-207ENST00000497850 PREX2Q70Z35 1606 aa17.66■□□□□ 0.42
NXF3-207ENST00000497850 KDM5CP41229 1560 aa17.65■□□□□ 0.42
NXF3-207ENST00000497850 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
NXF3-207ENST00000497850 ARHGEF5Q12774 1597 aa17.64■□□□□ 0.42
NXF3-207ENST00000497850 ERICH6BQ5W0A0 696 aa17.64■□□□□ 0.41
NXF3-207ENST00000497850 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
NXF3-207ENST00000497850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
NXF3-207ENST00000497850 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
NXF3-207ENST00000497850 SENP3-EIF4A1A0A087X0R7 540 aa17.64■□□□□ 0.41
NXF3-207ENST00000497850 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
NXF3-207ENST00000497850 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.41
NXF3-207ENST00000497850 ARHGAP5Q13017 1502 aa17.62■□□□□ 0.41
NXF3-207ENST00000497850 KDM5DQ9BY66 1539 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms