RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
TOM1-217ENST00000497448 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
TOM1-217ENST00000497448 MLECQ14165 292 aa18.06■□□□□ 0.48
TOM1-217ENST00000497448 C9orf84Q5VXU9 1444 aa18■□□□□ 0.47
TOM1-217ENST00000497448 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
TOM1-217ENST00000497448 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
TOM1-217ENST00000497448 ATP10AO60312 1499 aa17.97■□□□□ 0.47
TOM1-217ENST00000497448 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
TOM1-217ENST00000497448 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
TOM1-217ENST00000497448 CEBPAP49715 358 aaPredicted RBP17.96■□□□□ 0.47
TOM1-217ENST00000497448 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
TOM1-217ENST00000497448 PTPRTO14522 1441 aa17.95■□□□□ 0.46
TOM1-217ENST00000497448 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
TOM1-217ENST00000497448 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
TOM1-217ENST00000497448 C3P01024 1663 aa17.93■□□□□ 0.46
TOM1-217ENST00000497448 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
TOM1-217ENST00000497448 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
TOM1-217ENST00000497448 PLCH2O75038 1416 aa17.91■□□□□ 0.46
TOM1-217ENST00000497448 KDM5CP41229 1560 aa17.9■□□□□ 0.46
TOM1-217ENST00000497448 DIP2CQ9Y2E4 1556 aa17.89■□□□□ 0.45
TOM1-217ENST00000497448 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
TOM1-217ENST00000497448 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
TOM1-217ENST00000497448 ABCA6Q8N139 1617 aa17.86■□□□□ 0.45
TOM1-217ENST00000497448 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
TOM1-217ENST00000497448 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
TOM1-217ENST00000497448 KIF14Q15058 1648 aa17.83■□□□□ 0.44
TOM1-217ENST00000497448 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
TOM1-217ENST00000497448 TRAPPC8Q9Y2L5 1435 aa17.79■□□□□ 0.44
TOM1-217ENST00000497448 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
TOM1-217ENST00000497448 AGLP35573 1532 aa17.78■□□□□ 0.44
TOM1-217ENST00000497448 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
TOM1-217ENST00000497448 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
TOM1-217ENST00000497448 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
TOM1-217ENST00000497448 MROH2AA6NES4 1674 aa17.74■□□□□ 0.43
TOM1-217ENST00000497448 AFAP1Q8N556 730 aa17.74■□□□□ 0.43
TOM1-217ENST00000497448 CDC42BPBQ9Y5S2 1711 aa17.74■□□□□ 0.43
TOM1-217ENST00000497448 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
TOM1-217ENST00000497448 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
TOM1-217ENST00000497448 ITSN2Q9NZM3 1697 aa17.73■□□□□ 0.43
TOM1-217ENST00000497448 ABCC1P33527 1531 aa17.72■□□□□ 0.43
TOM1-217ENST00000497448 CNTLNQ9NXG0 1405 aa17.72■□□□□ 0.43
TOM1-217ENST00000497448 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
TOM1-217ENST00000497448 MYO3AQ8NEV4 1616 aa17.71■□□□□ 0.43
TOM1-217ENST00000497448 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
TOM1-217ENST00000497448 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
TOM1-217ENST00000497448 UBAP1LF5GYI3 381 aa17.7■□□□□ 0.42
TOM1-217ENST00000497448 NPATQ14207 1427 aa17.7■□□□□ 0.42
TOM1-217ENST00000497448 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
TOM1-217ENST00000497448 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
TOM1-217ENST00000497448 TROQ12816 1431 aaPredicted RBP17.69■□□□□ 0.42
TOM1-217ENST00000497448 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
TOM1-217ENST00000497448 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
TOM1-217ENST00000497448 EEA1Q15075 1411 aa17.67■□□□□ 0.42
TOM1-217ENST00000497448 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
TOM1-217ENST00000497448 NCKAP5LQ9HCH0 1330 aa17.65■□□□□ 0.42
TOM1-217ENST00000497448 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
TOM1-217ENST00000497448 CLIP1P30622 1438 aa17.64■□□□□ 0.42
TOM1-217ENST00000497448 FMN1Q68DA7 1419 aa17.64■□□□□ 0.42
TOM1-217ENST00000497448 TCOF1Q13428 1488 aaKnown RBP17.64■□□□□ 0.41
TOM1-217ENST00000497448 CLTCQ00610 1675 aaKnown RBP17.64■□□□□ 0.41
TOM1-217ENST00000497448 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
TOM1-217ENST00000497448 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
TOM1-217ENST00000497448 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
TOM1-217ENST00000497448 SAMD9LQ8IVG5 1584 aa17.59■□□□□ 0.41
TOM1-217ENST00000497448 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
TOM1-217ENST00000497448 ZMYM3Q14202 1370 aa17.59■□□□□ 0.41
TOM1-217ENST00000497448 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
TOM1-217ENST00000497448 HSPA1LP34931 641 aa17.57■□□□□ 0.4
TOM1-217ENST00000497448 PKD2Q13563 968 aa17.57■□□□□ 0.4
TOM1-217ENST00000497448 POLR1AO95602 1720 aaPredicted RBP17.56■□□□□ 0.4
TOM1-217ENST00000497448 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
TOM1-217ENST00000497448 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
TOM1-217ENST00000497448 NEURL4Q96JN8 1562 aa17.53■□□□□ 0.4
TOM1-217ENST00000497448 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
TOM1-217ENST00000497448 CPS1P31327 1500 aa17.53■□□□□ 0.4
TOM1-217ENST00000497448 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
TOM1-217ENST00000497448 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
TOM1-217ENST00000497448 DNMT1P26358 1616 aaKnown RBP17.52■□□□□ 0.4
TOM1-217ENST00000497448 ATP7AQ04656 1500 aa17.52■□□□□ 0.39
TOM1-217ENST00000497448 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
TOM1-217ENST00000497448 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
TOM1-217ENST00000497448 A2ML1A8K2U0 1454 aa17.49■□□□□ 0.39
TOM1-217ENST00000497448 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
TOM1-217ENST00000497448 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
TOM1-217ENST00000497448 SHANK2Q9UPX8 1470 aa17.47■□□□□ 0.39
TOM1-217ENST00000497448 A2MP01023 1474 aa17.46■□□□□ 0.39
TOM1-217ENST00000497448 TOM1O60784 492 aa17.46■□□□□ 0.39
TOM1-217ENST00000497448 VWDEQ8N2E2 1590 aa17.45■□□□□ 0.38
TOM1-217ENST00000497448 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
TOM1-217ENST00000497448 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
TOM1-217ENST00000497448 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
TOM1-217ENST00000497448 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
TOM1-217ENST00000497448 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.38
TOM1-217ENST00000497448 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.37
TOM1-217ENST00000497448 GGT6Q6P531 493 aa17.39■□□□□ 0.37
TOM1-217ENST00000497448 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
TOM1-217ENST00000497448 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.37
TOM1-217ENST00000497448 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
TOM1-217ENST00000497448 HNRNPMP52272 730 aaKnown RBP eCLIP17.37■□□□□ 0.37
TOM1-217ENST00000497448 KIAA1107Q9UPP5 1409 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms