RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
PDE6B-212ENST00000496514 DENND4BO75064 1496 aaPredicted RBP17.42■□□□□ 0.38
PDE6B-212ENST00000496514 RAPGEF6Q8TEU7 1601 aa17.4■□□□□ 0.38
PDE6B-212ENST00000496514 ABCC5O15440 1437 aa17.4■□□□□ 0.38
PDE6B-212ENST00000496514 DAPK1P53355 1430 aa17.39■□□□□ 0.37
PDE6B-212ENST00000496514 BCANQ96GW7 911 aa17.39■□□□□ 0.37
PDE6B-212ENST00000496514 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
PDE6B-212ENST00000496514 TCOF1Q13428 1488 aaKnown RBP17.38■□□□□ 0.37
PDE6B-212ENST00000496514 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
PDE6B-212ENST00000496514 ANP32CO43423 234 aa17.37■□□□□ 0.37
PDE6B-212ENST00000496514 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
PDE6B-212ENST00000496514 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
PDE6B-212ENST00000496514 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
PDE6B-212ENST00000496514 MIA2Q96PC5 1412 aa17.36■□□□□ 0.37
PDE6B-212ENST00000496514 KIF14Q15058 1648 aa17.35■□□□□ 0.37
PDE6B-212ENST00000496514 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
PDE6B-212ENST00000496514 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
PDE6B-212ENST00000496514 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
PDE6B-212ENST00000496514 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
PDE6B-212ENST00000496514 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
PDE6B-212ENST00000496514 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
PDE6B-212ENST00000496514 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
PDE6B-212ENST00000496514 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
PDE6B-212ENST00000496514 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
PDE6B-212ENST00000496514 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
PDE6B-212ENST00000496514 PKD2Q13563 968 aa17.28■□□□□ 0.36
PDE6B-212ENST00000496514 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
PDE6B-212ENST00000496514 NUP160Q12769 1436 aa17.28■□□□□ 0.36
PDE6B-212ENST00000496514 GCC2Q8IWJ2 1684 aa17.27■□□□□ 0.36
PDE6B-212ENST00000496514 EIF4G2P78344 907 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDE6B-212ENST00000496514 ATP10BO94823 1461 aa17.25■□□□□ 0.35
PDE6B-212ENST00000496514 KDM2AQ9Y2K7 1162 aa17.25■□□□□ 0.35
PDE6B-212ENST00000496514 PTPRGP23470 1445 aa17.25■□□□□ 0.35
PDE6B-212ENST00000496514 ANKRD30BQ9BXX2 1392 aa17.24■□□□□ 0.35
PDE6B-212ENST00000496514 AKNAQ7Z591 1439 aa17.23■□□□□ 0.35
PDE6B-212ENST00000496514 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
PDE6B-212ENST00000496514 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
PDE6B-212ENST00000496514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDE6B-212ENST00000496514 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
PDE6B-212ENST00000496514 TSPY4P0CV99 314 aa17.21■□□□□ 0.35
PDE6B-212ENST00000496514 TSPY10P0CW01 314 aa17.21■□□□□ 0.35
PDE6B-212ENST00000496514 FKBP8Q14318 412 aa17.2■□□□□ 0.34
PDE6B-212ENST00000496514 NUP155O75694 1391 aa17.19■□□□□ 0.34
PDE6B-212ENST00000496514 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
PDE6B-212ENST00000496514 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDE6B-212ENST00000496514 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
PDE6B-212ENST00000496514 ERCC6L2Q5T890 1561 aa17.17■□□□□ 0.34
PDE6B-212ENST00000496514 PZPP20742 1482 aa17.16■□□□□ 0.34
PDE6B-212ENST00000496514 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
PDE6B-212ENST00000496514 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
PDE6B-212ENST00000496514 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
PDE6B-212ENST00000496514 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
PDE6B-212ENST00000496514 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
PDE6B-212ENST00000496514 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
PDE6B-212ENST00000496514 C9orf84Q5VXU9 1444 aa17.13■□□□□ 0.33
PDE6B-212ENST00000496514 ABCA8O94911 1581 aa17.13■□□□□ 0.33
PDE6B-212ENST00000496514 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
PDE6B-212ENST00000496514 CHD1O14646 1710 aa17.11■□□□□ 0.33
PDE6B-212ENST00000496514 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
PDE6B-212ENST00000496514 TEX14Q8IWB6 1497 aa17.1■□□□□ 0.33
PDE6B-212ENST00000496514 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
PDE6B-212ENST00000496514 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
PDE6B-212ENST00000496514 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
PDE6B-212ENST00000496514 CDC42BPAQ5VT25 1732 aa17.09■□□□□ 0.33
PDE6B-212ENST00000496514 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
PDE6B-212ENST00000496514 CCDC7Q96M83 1385 aa17.08■□□□□ 0.33
PDE6B-212ENST00000496514 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
PDE6B-212ENST00000496514 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
PDE6B-212ENST00000496514 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
PDE6B-212ENST00000496514 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
PDE6B-212ENST00000496514 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
PDE6B-212ENST00000496514 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.32
PDE6B-212ENST00000496514 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.31
PDE6B-212ENST00000496514 USP47Q96K76 1375 aa17.02■□□□□ 0.31
PDE6B-212ENST00000496514 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.31
PDE6B-212ENST00000496514 NEFLP07196 543 aa17.01■□□□□ 0.31
PDE6B-212ENST00000496514 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
PDE6B-212ENST00000496514 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
PDE6B-212ENST00000496514 ADGRL2O95490 1459 aa17■□□□□ 0.31
PDE6B-212ENST00000496514 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
PDE6B-212ENST00000496514 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
PDE6B-212ENST00000496514 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
PDE6B-212ENST00000496514 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
PDE6B-212ENST00000496514 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
PDE6B-212ENST00000496514 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
PDE6B-212ENST00000496514 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
PDE6B-212ENST00000496514 CDC42BPBQ9Y5S2 1711 aa16.95■□□□□ 0.3
PDE6B-212ENST00000496514 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
PDE6B-212ENST00000496514 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
PDE6B-212ENST00000496514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDE6B-212ENST00000496514 PLEKHH2Q8IVE3 1493 aa16.93■□□□□ 0.3
PDE6B-212ENST00000496514 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
PDE6B-212ENST00000496514 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
PDE6B-212ENST00000496514 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
PDE6B-212ENST00000496514 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
PDE6B-212ENST00000496514 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
PDE6B-212ENST00000496514 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
PDE6B-212ENST00000496514 FAM135AQ9P2D6 1515 aa16.88■□□□□ 0.29
PDE6B-212ENST00000496514 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
PDE6B-212ENST00000496514 PREX2Q70Z35 1606 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms