RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
ATG3-209ENST00000496423 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
ATG3-209ENST00000496423 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.82
ATG3-209ENST00000496423 ZMYM4Q5VZL5 1548 aa20.19■□□□□ 0.82
ATG3-209ENST00000496423 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
ATG3-209ENST00000496423 RAPGEF6Q8TEU7 1601 aa20.16■□□□□ 0.82
ATG3-209ENST00000496423 ARHGEF12Q9NZN5 1544 aa20.13■□□□□ 0.81
ATG3-209ENST00000496423 ATP10AO60312 1499 aa20.11■□□□□ 0.81
ATG3-209ENST00000496423 SIGLEC1Q9BZZ2 1709 aa20.11■□□□□ 0.81
ATG3-209ENST00000496423 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
ATG3-209ENST00000496423 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
ATG3-209ENST00000496423 C9orf84Q5VXU9 1444 aa20.09■□□□□ 0.81
ATG3-209ENST00000496423 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
ATG3-209ENST00000496423 UBAP1LF5GYI3 381 aa20.08■□□□□ 0.81
ATG3-209ENST00000496423 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
ATG3-209ENST00000496423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.03■□□□□ 0.83e-6■■■■□ 23
ATG3-209ENST00000496423 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
ATG3-209ENST00000496423 NUP153P49790 1475 aaKnown RBP20.01■□□□□ 0.79
ATG3-209ENST00000496423 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
ATG3-209ENST00000496423 SAMD9Q5K651 1589 aa19.99■□□□□ 0.79
ATG3-209ENST00000496423 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
ATG3-209ENST00000496423 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
ATG3-209ENST00000496423 PLCH2O75038 1416 aa19.95■□□□□ 0.78
ATG3-209ENST00000496423 NCOA1Q15788 1441 aa19.95■□□□□ 0.78
ATG3-209ENST00000496423 C3P01024 1663 aa19.94■□□□□ 0.78
ATG3-209ENST00000496423 FOXD1Q16676 465 aa19.93■□□□□ 0.78
ATG3-209ENST00000496423 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
ATG3-209ENST00000496423 ZNF518AQ6AHZ1 1483 aa19.91■□□□□ 0.78
ATG3-209ENST00000496423 MED1Q15648 1581 aaPredicted RBP19.9■□□□□ 0.78
ATG3-209ENST00000496423 ZNF335Q9H4Z2 1342 aaPredicted RBP19.88■□□□□ 0.77
ATG3-209ENST00000496423 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
ATG3-209ENST00000496423 TOM1O60784 492 aa19.87■□□□□ 0.77
ATG3-209ENST00000496423 PKD2Q13563 968 aa19.87■□□□□ 0.77
ATG3-209ENST00000496423 CNTLNQ9NXG0 1405 aa19.86■□□□□ 0.77
ATG3-209ENST00000496423 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
ATG3-209ENST00000496423 HSPA1LP34931 641 aa19.85■□□□□ 0.77
ATG3-209ENST00000496423 MYO5CQ9NQX4 1742 aa19.85■□□□□ 0.77
ATG3-209ENST00000496423 NCKAP5LQ9HCH0 1330 aa19.84■□□□□ 0.77
ATG3-209ENST00000496423 REREQ9P2R6 1566 aa19.84■□□□□ 0.77
ATG3-209ENST00000496423 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
ATG3-209ENST00000496423 AGLP35573 1532 aa19.83■□□□□ 0.77
ATG3-209ENST00000496423 PIP4K2BP78356 416 aa19.83■□□□□ 0.77
ATG3-209ENST00000496423 AFAP1Q8N556 730 aa19.83■□□□□ 0.77
ATG3-209ENST00000496423 NPATQ14207 1427 aa19.81■□□□□ 0.76
ATG3-209ENST00000496423 KDM5CP41229 1560 aa19.78■□□□□ 0.76
ATG3-209ENST00000496423 DIP2CQ9Y2E4 1556 aa19.78■□□□□ 0.76
ATG3-209ENST00000496423 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
ATG3-209ENST00000496423 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
ATG3-209ENST00000496423 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
ATG3-209ENST00000496423 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
ATG3-209ENST00000496423 MLH3Q9UHC1 1453 aa19.75■□□□□ 0.75
ATG3-209ENST00000496423 ARHGAP5Q13017 1502 aa19.75■□□□□ 0.75
ATG3-209ENST00000496423 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
ATG3-209ENST00000496423 MROH2AA6NES4 1674 aa19.73■□□□□ 0.75
ATG3-209ENST00000496423 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
ATG3-209ENST00000496423 ZMYM3Q14202 1370 aa19.71■□□□□ 0.75
ATG3-209ENST00000496423 ABCA6Q8N139 1617 aa19.71■□□□□ 0.75
ATG3-209ENST00000496423 CPS1P31327 1500 aa19.68■□□□□ 0.74
ATG3-209ENST00000496423 KIF14Q15058 1648 aa19.68■□□□□ 0.74
ATG3-209ENST00000496423 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
ATG3-209ENST00000496423 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
ATG3-209ENST00000496423 CLIP1P30622 1438 aa19.67■□□□□ 0.74
ATG3-209ENST00000496423 ZNF142P52746 1687 aaPredicted RBP19.66■□□□□ 0.74
ATG3-209ENST00000496423 CEP170BQ9Y4F5 1589 aaPredicted RBP19.63■□□□□ 0.73
ATG3-209ENST00000496423 MYO3AQ8NEV4 1616 aa19.62■□□□□ 0.73
ATG3-209ENST00000496423 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
ATG3-209ENST00000496423 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
ATG3-209ENST00000496423 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
ATG3-209ENST00000496423 KIDINS220Q9ULH0 1771 aa19.58■□□□□ 0.73
ATG3-209ENST00000496423 CDC42BPBQ9Y5S2 1711 aa19.58■□□□□ 0.72
ATG3-209ENST00000496423 CLTCQ00610 1675 aaKnown RBP19.57■□□□□ 0.72
ATG3-209ENST00000496423 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
ATG3-209ENST00000496423 ABCC1P33527 1531 aa19.55■□□□□ 0.72
ATG3-209ENST00000496423 A2ML1A8K2U0 1454 aa19.54■□□□□ 0.72
ATG3-209ENST00000496423 GGT6Q6P531 493 aa19.53■□□□□ 0.72
ATG3-209ENST00000496423 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
ATG3-209ENST00000496423 EEA1Q15075 1411 aa19.52■□□□□ 0.72
ATG3-209ENST00000496423 ANKLE2Q86XL3 938 aa19.52■□□□□ 0.72
ATG3-209ENST00000496423 SPAG9O60271 1321 aaKnown RBP19.51■□□□□ 0.71
ATG3-209ENST00000496423 DNMT1P26358 1616 aaKnown RBP19.5■□□□□ 0.71
ATG3-209ENST00000496423 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
ATG3-209ENST00000496423 THEMISQ8N1K5 641 aaPredicted RBP19.47■□□□□ 0.71
ATG3-209ENST00000496423 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
ATG3-209ENST00000496423 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
ATG3-209ENST00000496423 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
ATG3-209ENST00000496423 A2MP01023 1474 aa19.43■□□□□ 0.7
ATG3-209ENST00000496423 NEURL4Q96JN8 1562 aa19.41■□□□□ 0.7
ATG3-209ENST00000496423 ADRA2BP18089 450 aa19.41■□□□□ 0.7
ATG3-209ENST00000496423 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
ATG3-209ENST00000496423 TNRQ92752 1358 aa19.4■□□□□ 0.7
ATG3-209ENST00000496423 ATP7AQ04656 1500 aa19.4■□□□□ 0.7
ATG3-209ENST00000496423 HNRNPMP52272 730 aaKnown RBP eCLIP19.39■□□□□ 0.69
ATG3-209ENST00000496423 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
ATG3-209ENST00000496423 NPHP4O75161 1426 aaPredicted RBP19.38■□□□□ 0.69
ATG3-209ENST00000496423 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
ATG3-209ENST00000496423 RNF17Q9BXT8 1623 aaKnown RBP19.38■□□□□ 0.69
ATG3-209ENST00000496423 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
ATG3-209ENST00000496423 PLXNC1O60486 1568 aa19.37■□□□□ 0.69
ATG3-209ENST00000496423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.69
ATG3-209ENST00000496423 POTEAQ6S8J7 498 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms