RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 FAM9BQ8IZU0 186 aa28.02■■■□□ 2.08
LYSMD4-209ENST00000496108 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
LYSMD4-209ENST00000496108 POLR1AO95602 1720 aaPredicted RBP28■■■□□ 2.07
LYSMD4-209ENST00000496108 MAGI3Q5TCQ9 1506 aa28■■■□□ 2.07
LYSMD4-209ENST00000496108 C11orf95C9JLR9 678 aaPredicted RBP27.99■■■□□ 2.07
LYSMD4-209ENST00000496108 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
LYSMD4-209ENST00000496108 DEKP35659 375 aaKnown RBP27.99■■■□□ 2.07
LYSMD4-209ENST00000496108 NOP58Q9Y2X3 529 aaKnown RBP27.99■■■□□ 2.07
LYSMD4-209ENST00000496108 KDM6BO15054 1643 aa27.98■■■□□ 2.07
LYSMD4-209ENST00000496108 MPHOSPH9Q99550 1183 aa27.98■■■□□ 2.07
LYSMD4-209ENST00000496108 SMG6Q86US8 1419 aaKnown RBP27.97■■■□□ 2.07
LYSMD4-209ENST00000496108 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
LYSMD4-209ENST00000496108 EIF4G3O43432 1585 aaKnown RBP27.95■■■□□ 2.07
LYSMD4-209ENST00000496108 SPATA31E1Q6ZUB1 1445 aa27.95■■■□□ 2.07
LYSMD4-209ENST00000496108 RPRD2Q5VT52 1461 aaKnown RBP27.95■■■□□ 2.07
LYSMD4-209ENST00000496108 TEX14Q8IWB6 1497 aa27.93■■■□□ 2.06
LYSMD4-209ENST00000496108 RNF123Q5XPI4 1314 aa27.91■■■□□ 2.06
LYSMD4-209ENST00000496108 CHIC2Q9UKJ5 165 aa27.9■■■□□ 2.06
LYSMD4-209ENST00000496108 ANKRD30BQ9BXX2 1392 aa27.9■■■□□ 2.06
LYSMD4-209ENST00000496108 KIF7Q2M1P5 1343 aa27.9■■■□□ 2.06
LYSMD4-209ENST00000496108 ROCK1Q13464 1354 aa27.85■■■□□ 2.05
LYSMD4-209ENST00000496108 NBPF8Q3BBV2 869 aa27.84■■■□□ 2.05
LYSMD4-209ENST00000496108 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
LYSMD4-209ENST00000496108 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
LYSMD4-209ENST00000496108 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
LYSMD4-209ENST00000496108 EPRSP07814 1512 aaKnown RBP27.8■■■□□ 2.04
LYSMD4-209ENST00000496108 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
LYSMD4-209ENST00000496108 DHX29Q7Z478 1369 aaKnown RBP27.78■■■□□ 2.04
LYSMD4-209ENST00000496108 ANP32AP39687 249 aaKnown RBP27.77■■■□□ 2.04
LYSMD4-209ENST00000496108 IPO9Q96P70 1041 aaKnown RBP27.77■■■□□ 2.04
LYSMD4-209ENST00000496108 FOXD1Q16676 465 aa27.75■■■□□ 2.03
LYSMD4-209ENST00000496108 CCDC136Q96JN2 1154 aa27.74■■■□□ 2.03
LYSMD4-209ENST00000496108 DAPK1P53355 1430 aa27.73■■■□□ 2.03
LYSMD4-209ENST00000496108 DNMT1P26358 1616 aaKnown RBP27.71■■■□□ 2.03
LYSMD4-209ENST00000496108 ARID4BQ4LE39 1312 aaPredicted RBP27.7■■■□□ 2.03
LYSMD4-209ENST00000496108 NBR1Q14596 966 aa27.7■■■□□ 2.02
LYSMD4-209ENST00000496108 MBD5Q9P267 1494 aa27.69■■■□□ 2.02
LYSMD4-209ENST00000496108 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
LYSMD4-209ENST00000496108 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
LYSMD4-209ENST00000496108 CDK13Q14004 1512 aaKnown RBP27.66■■■□□ 2.02
LYSMD4-209ENST00000496108 ABCC5O15440 1437 aa27.65■■■□□ 2.02
LYSMD4-209ENST00000496108 ZBTB47Q9UFB7 747 aaPredicted RBP27.64■■■□□ 2.02
LYSMD4-209ENST00000496108 RTL5Q5HYW3 569 aaPredicted RBP27.62■■■□□ 2.01
LYSMD4-209ENST00000496108 SLC4A1APQ9BWU0 796 aaKnown RBP27.62■■■□□ 2.01
LYSMD4-209ENST00000496108 IQGAP2Q13576 1575 aa27.62■■■□□ 2.01
LYSMD4-209ENST00000496108 CHD1O14646 1710 aa27.61■■■□□ 2.01
LYSMD4-209ENST00000496108 ROCK2O75116 1388 aaKnown RBP27.6■■■□□ 2.01
LYSMD4-209ENST00000496108 BCORL1Q5H9F3 1711 aa27.6■■■□□ 2.01
LYSMD4-209ENST00000496108 USP47Q96K76 1375 aa27.6■■■□□ 2.01
LYSMD4-209ENST00000496108 KIF14Q15058 1648 aa27.6■■■□□ 2.01
LYSMD4-209ENST00000496108 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
LYSMD4-209ENST00000496108 PZPP20742 1482 aa27.59■■■□□ 2.01
LYSMD4-209ENST00000496108 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
LYSMD4-209ENST00000496108 KDM5CP41229 1560 aa27.57■■■□□ 2
LYSMD4-209ENST00000496108 LRPPRCP42704 1394 aaKnown RBP27.54■■■□□ 2
LYSMD4-209ENST00000496108 OSCARQ8IYS5 282 aa27.53■■■□□ 2
LYSMD4-209ENST00000496108 FBLN2P98095 1184 aa27.52■■■□□ 2
LYSMD4-209ENST00000496108 KTN1Q86UP2 1357 aaKnown RBP27.51■■■□□ 2
LYSMD4-209ENST00000496108 KIAA1107Q9UPP5 1409 aa27.51■■□□□ 1.99
LYSMD4-209ENST00000496108 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
LYSMD4-209ENST00000496108 TCERG1O14776 1098 aaKnown RBP27.48■■□□□ 1.99
LYSMD4-209ENST00000496108 TMC1Q8TDI8 760 aa27.48■■□□□ 1.99
LYSMD4-209ENST00000496108 KIF15Q9NS87 1388 aa27.48■■□□□ 1.99
LYSMD4-209ENST00000496108 SYNJ2O15056 1496 aa27.47■■□□□ 1.99
LYSMD4-209ENST00000496108 BRD4O60885 1362 aaPredicted RBP27.47■■□□□ 1.99
LYSMD4-209ENST00000496108 RALGAPBQ86X10 1494 aa27.46■■□□□ 1.99
LYSMD4-209ENST00000496108 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
LYSMD4-209ENST00000496108 RRP1P56182 461 aaKnown RBP27.44■■□□□ 1.98
LYSMD4-209ENST00000496108 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
LYSMD4-209ENST00000496108 ADGBQ8N7X0 1667 aa27.44■■□□□ 1.98
LYSMD4-209ENST00000496108 ADGRL2O95490 1459 aa27.42■■□□□ 1.98
LYSMD4-209ENST00000496108 USP35Q9P2H5 1018 aa27.42■■□□□ 1.98
LYSMD4-209ENST00000496108 ZNF644Q9H582 1327 aaPredicted RBP27.41■■□□□ 1.98
LYSMD4-209ENST00000496108 MYBBP1AQ9BQG0 1328 aaKnown RBP27.4■■□□□ 1.98
LYSMD4-209ENST00000496108 MS4A1P11836 297 aa27.4■■□□□ 1.98
LYSMD4-209ENST00000496108 ARHGEF12Q9NZN5 1544 aa27.39■■□□□ 1.98
LYSMD4-209ENST00000496108 RALBP1Q15311 655 aa27.39■■□□□ 1.97
LYSMD4-209ENST00000496108 POLR3GLQ9BT43 218 aa27.39■■□□□ 1.97
LYSMD4-209ENST00000496108 NUP153P49790 1475 aaKnown RBP27.36■■□□□ 1.97
LYSMD4-209ENST00000496108 CAMSAP2Q08AD1 1489 aa27.36■■□□□ 1.97
LYSMD4-209ENST00000496108 PDE3BQ13370 1112 aa27.34■■□□□ 1.97
LYSMD4-209ENST00000496108 E9PCH4 1651 aa27.34■■□□□ 1.97
LYSMD4-209ENST00000496108 PDE4AP27815 886 aa27.33■■□□□ 1.97
LYSMD4-209ENST00000496108 CNGB1Q14028 1251 aaPredicted RBP27.33■■□□□ 1.97
LYSMD4-209ENST00000496108 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
LYSMD4-209ENST00000496108 EXOC6Q8TAG9 804 aa27.33■■□□□ 1.97
LYSMD4-209ENST00000496108 RCAN3Q9UKA8 241 aa27.33■■□□□ 1.97
LYSMD4-209ENST00000496108 CROCC2H7BZ55 1655 aa27.32■■□□□ 1.96
LYSMD4-209ENST00000496108 BACH2Q9BYV9 841 aa27.32■■□□□ 1.96
LYSMD4-209ENST00000496108 KIAA0556O60303 1618 aa27.32■■□□□ 1.96
LYSMD4-209ENST00000496108 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
LYSMD4-209ENST00000496108 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
LYSMD4-209ENST00000496108 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
LYSMD4-209ENST00000496108 RAPGEF6Q8TEU7 1601 aa27.31■■□□□ 1.96
LYSMD4-209ENST00000496108 PKD2Q13563 968 aa27.3■■□□□ 1.96
LYSMD4-209ENST00000496108 PPM1GO15355 546 aaPredicted RBP27.28■■□□□ 1.96
LYSMD4-209ENST00000496108 TROQ12816 1431 aaPredicted RBP27.28■■□□□ 1.96
LYSMD4-209ENST00000496108 CARD11Q9BXL7 1154 aa27.28■■□□□ 1.96
LYSMD4-209ENST00000496108 DISP1Q96F81 1524 aa27.27■■□□□ 1.96
LYSMD4-209ENST00000496108 NPM2Q86SE8 214 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms