RNA–Protein interactions for RNA: ENST00000496106.5

ARHGEF3-213, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-213ENST00000496106 CDC42BPBQ9Y5S2 1711 aa19.57■□□□□ 0.72
ARHGEF3-213ENST00000496106 CFDP1Q9UEE9 299 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF3-213ENST00000496106 ABCC5O15440 1437 aa19.56■□□□□ 0.72
ARHGEF3-213ENST00000496106 DAPK1P53355 1430 aa19.56■□□□□ 0.72
ARHGEF3-213ENST00000496106 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
ARHGEF3-213ENST00000496106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.55■□□□□ 0.722e-6■■■■■ 51.7
ARHGEF3-213ENST00000496106 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
ARHGEF3-213ENST00000496106 PREX2Q70Z35 1606 aa19.54■□□□□ 0.72
ARHGEF3-213ENST00000496106 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
ARHGEF3-213ENST00000496106 CROCC2H7BZ55 1655 aa19.51■□□□□ 0.71
ARHGEF3-213ENST00000496106 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
ARHGEF3-213ENST00000496106 ROCK1Q13464 1354 aa19.49■□□□□ 0.71
ARHGEF3-213ENST00000496106 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
ARHGEF3-213ENST00000496106 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
ARHGEF3-213ENST00000496106 KDM6BO15054 1643 aa19.47■□□□□ 0.71
ARHGEF3-213ENST00000496106 RRP7BPQ9NSQ0 103 aa19.46■□□□□ 0.71
ARHGEF3-213ENST00000496106 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
ARHGEF3-213ENST00000496106 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
ARHGEF3-213ENST00000496106 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
ARHGEF3-213ENST00000496106 ADGRL2O95490 1459 aa19.43■□□□□ 0.7
ARHGEF3-213ENST00000496106 MBD5Q9P267 1494 aa19.43■□□□□ 0.7
ARHGEF3-213ENST00000496106 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
ARHGEF3-213ENST00000496106 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
ARHGEF3-213ENST00000496106 PLCH2O75038 1416 aa19.4■□□□□ 0.7
ARHGEF3-213ENST00000496106 NCOA1Q15788 1441 aa19.4■□□□□ 0.7
ARHGEF3-213ENST00000496106 SHANK2Q9UPX8 1470 aa19.4■□□□□ 0.7
ARHGEF3-213ENST00000496106 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.7
ARHGEF3-213ENST00000496106 ABCA9Q8IUA7 1624 aa19.37■□□□□ 0.69
ARHGEF3-213ENST00000496106 ASXL2Q76L83 1435 aa19.37■□□□□ 0.69
ARHGEF3-213ENST00000496106 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
ARHGEF3-213ENST00000496106 HNRNPMP52272 730 aaKnown RBP eCLIP19.36■□□□□ 0.69
ARHGEF3-213ENST00000496106 ARAP3Q8WWN8 1544 aa19.36■□□□□ 0.69
ARHGEF3-213ENST00000496106 SYCP2Q9BX26 1530 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 DENND4BO75064 1496 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 CCDC141Q6ZP82 1450 aa19.34■□□□□ 0.69
ARHGEF3-213ENST00000496106 ARHGEF12Q9NZN5 1544 aa19.32■□□□□ 0.68
ARHGEF3-213ENST00000496106 PLEKHH2Q8IVE3 1493 aa19.32■□□□□ 0.68
ARHGEF3-213ENST00000496106 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
ARHGEF3-213ENST00000496106 RSPH4AQ5TD94 716 aa19.32■□□□□ 0.68
ARHGEF3-213ENST00000496106 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
ARHGEF3-213ENST00000496106 ABCC1P33527 1531 aa19.3■□□□□ 0.68
ARHGEF3-213ENST00000496106 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
ARHGEF3-213ENST00000496106 TSPY4P0CV99 314 aa19.28■□□□□ 0.68
ARHGEF3-213ENST00000496106 TSPY10P0CW01 314 aa19.28■□□□□ 0.68
ARHGEF3-213ENST00000496106 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
ARHGEF3-213ENST00000496106 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
ARHGEF3-213ENST00000496106 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
ARHGEF3-213ENST00000496106 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
ARHGEF3-213ENST00000496106 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
ARHGEF3-213ENST00000496106 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
ARHGEF3-213ENST00000496106 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
ARHGEF3-213ENST00000496106 PLXNC1O60486 1568 aa19.22■□□□□ 0.67
ARHGEF3-213ENST00000496106 KIF15Q9NS87 1388 aa19.22■□□□□ 0.67
ARHGEF3-213ENST00000496106 FANCAO15360 1455 aa19.21■□□□□ 0.67
ARHGEF3-213ENST00000496106 TRAPPC8Q9Y2L5 1435 aa19.21■□□□□ 0.67
ARHGEF3-213ENST00000496106 PZPP20742 1482 aa19.21■□□□□ 0.67
ARHGEF3-213ENST00000496106 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
ARHGEF3-213ENST00000496106 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
ARHGEF3-213ENST00000496106 MIER1Q8N108 512 aa19.17■□□□□ 0.66
ARHGEF3-213ENST00000496106 KDM5DQ9BY66 1539 aa19.16■□□□□ 0.66
ARHGEF3-213ENST00000496106 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
ARHGEF3-213ENST00000496106 CENPBP07199 599 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF3-213ENST00000496106 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
ARHGEF3-213ENST00000496106 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
ARHGEF3-213ENST00000496106 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
ARHGEF3-213ENST00000496106 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
ARHGEF3-213ENST00000496106 ZFYVE16Q7Z3T8 1539 aa19.12■□□□□ 0.65
ARHGEF3-213ENST00000496106 DUOX2Q9NRD8 1548 aa19.12■□□□□ 0.65
ARHGEF3-213ENST00000496106 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
ARHGEF3-213ENST00000496106 FOXD1Q16676 465 aa19.11■□□□□ 0.65
ARHGEF3-213ENST00000496106 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
ARHGEF3-213ENST00000496106 UNC13BO14795 1591 aa19.11■□□□□ 0.65
ARHGEF3-213ENST00000496106 CFAP74Q9C0B2 1584 aa19.11■□□□□ 0.65
ARHGEF3-213ENST00000496106 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF3-213ENST00000496106 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
ARHGEF3-213ENST00000496106 MAP3K4Q9Y6R4 1608 aa19.1■□□□□ 0.65
ARHGEF3-213ENST00000496106 GLI2P10070 1586 aa19.09■□□□□ 0.65
ARHGEF3-213ENST00000496106 NUP155O75694 1391 aa19.08■□□□□ 0.64
ARHGEF3-213ENST00000496106 SPAG9O60271 1321 aaKnown RBP19.07■□□□□ 0.64
ARHGEF3-213ENST00000496106 ERBINQ96RT1 1412 aa19.07■□□□□ 0.64
ARHGEF3-213ENST00000496106 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
ARHGEF3-213ENST00000496106 RPRD2Q5VT52 1461 aaKnown RBP19.05■□□□□ 0.64
ARHGEF3-213ENST00000496106 KIDINS220Q9ULH0 1771 aa19.04■□□□□ 0.64
ARHGEF3-213ENST00000496106 MAGI2Q86UL8 1455 aa19.04■□□□□ 0.64
ARHGEF3-213ENST00000496106 PKD2Q13563 968 aa19.03■□□□□ 0.64
ARHGEF3-213ENST00000496106 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
ARHGEF3-213ENST00000496106 NEO1Q92859 1461 aa19.03■□□□□ 0.64
ARHGEF3-213ENST00000496106 DIP2BQ9P265 1576 aa19.03■□□□□ 0.64
ARHGEF3-213ENST00000496106 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
ARHGEF3-213ENST00000496106 KDM5CP41229 1560 aa19.02■□□□□ 0.63
ARHGEF3-213ENST00000496106 ZNF518AQ6AHZ1 1483 aa19.01■□□□□ 0.63
ARHGEF3-213ENST00000496106 POGZQ7Z3K3 1410 aa18.99■□□□□ 0.63
ARHGEF3-213ENST00000496106 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
ARHGEF3-213ENST00000496106 DEPDC5O75140 1603 aa18.98■□□□□ 0.63
ARHGEF3-213ENST00000496106 TEX14Q8IWB6 1497 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms