RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 STK24Q9Y6E0 443 aa7.88□□□□□ -1.15
VPS52-222ENST00000495981 CUX1P39880 1505 aa7.88□□□□□ -1.15
VPS52-222ENST00000495981 PBRM1Q86U86 1689 aa7.87□□□□□ -1.15
VPS52-222ENST00000495981 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
VPS52-222ENST00000495981 ABCA5Q8WWZ7 1642 aa7.86□□□□□ -1.15
VPS52-222ENST00000495981 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
VPS52-222ENST00000495981 TMEM132AQ24JP5 1023 aa7.86□□□□□ -1.15
VPS52-222ENST00000495981 CADPS2Q86UW7 1296 aa7.86□□□□□ -1.15
VPS52-222ENST00000495981 FGD5Q6ZNL6 1462 aa7.86□□□□□ -1.15
VPS52-222ENST00000495981 SYNJ2O15056 1496 aa7.85□□□□□ -1.15
VPS52-222ENST00000495981 HECW2Q9P2P5 1572 aa7.84□□□□□ -1.15
VPS52-222ENST00000495981 KCNV2Q8TDN2 545 aa7.84□□□□□ -1.15
VPS52-222ENST00000495981 ABCC10Q5T3U5 1492 aa7.83□□□□□ -1.16
VPS52-222ENST00000495981 LMTK3Q96Q04 1460 aa7.83□□□□□ -1.16
VPS52-222ENST00000495981 MAGI1Q96QZ7 1491 aaPredicted RBP7.83□□□□□ -1.16
VPS52-222ENST00000495981 PYGBP11216 843 aa7.83□□□□□ -1.16
VPS52-222ENST00000495981 FXR2P51116 673 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS52-222ENST00000495981 SOCS7O14512 581 aa7.82□□□□□ -1.16
VPS52-222ENST00000495981 PIP4P2Q8N4L2 257 aa7.82□□□□□ -1.16
VPS52-222ENST00000495981 RYDENQ9NUL5 291 aaKnown RBP7.82□□□□□ -1.16
VPS52-222ENST00000495981 ADGRL1O94910 1474 aa7.81□□□□□ -1.16
VPS52-222ENST00000495981 GRIN2BQ13224 1484 aa7.81□□□□□ -1.16
VPS52-222ENST00000495981 KIF13AQ9H1H9 1805 aa7.81□□□□□ -1.16
VPS52-222ENST00000495981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS52-222ENST00000495981 P3H3Q8IVL6 736 aa7.81□□□□□ -1.16
VPS52-222ENST00000495981 ADAMTS12P58397 1594 aa7.8□□□□□ -1.16
VPS52-222ENST00000495981 BIVM-ERCC5R4GMW8 1640 aa7.79□□□□□ -1.16
VPS52-222ENST00000495981 LMOD2Q6P5Q4 547 aa7.78□□□□□ -1.16
VPS52-222ENST00000495981 POTEHQ6S545 545 aa7.78□□□□□ -1.16
VPS52-222ENST00000495981 CEP170Q5SW79 1584 aa7.78□□□□□ -1.16
VPS52-222ENST00000495981 ABCA10Q8WWZ4 1543 aa7.78□□□□□ -1.16
VPS52-222ENST00000495981 COL17A1Q9UMD9 1497 aaPredicted RBP7.77□□□□□ -1.17
VPS52-222ENST00000495981 PRKAR2AP13861 404 aaKnown RBP7.77□□□□□ -1.17
VPS52-222ENST00000495981 KDM6BO15054 1643 aa7.76□□□□□ -1.17
VPS52-222ENST00000495981 SHROOM2Q13796 1616 aa7.76□□□□□ -1.17
VPS52-222ENST00000495981 CHADLQ6NUI6 762 aa7.75□□□□□ -1.17
VPS52-222ENST00000495981 ARXQ96QS3 562 aa7.75□□□□□ -1.17
VPS52-222ENST00000495981 NUP160Q12769 1436 aa7.75□□□□□ -1.17
VPS52-222ENST00000495981 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
VPS52-222ENST00000495981 BRPF1P55201 1214 aaPredicted RBP7.74□□□□□ -1.17
VPS52-222ENST00000495981 PRG4Q92954 1404 aaPredicted RBP7.74□□□□□ -1.17
VPS52-222ENST00000495981 DIP2BQ9P265 1576 aa7.73□□□□□ -1.17
VPS52-222ENST00000495981 ERICH6Q7L0X2 663 aa7.73□□□□□ -1.17
VPS52-222ENST00000495981 JPH4Q96JJ6 628 aa7.73□□□□□ -1.17
VPS52-222ENST00000495981 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
VPS52-222ENST00000495981 MFRPQ9BY79 579 aa7.72□□□□□ -1.17
VPS52-222ENST00000495981 RUSC2Q8N2Y8 1516 aa7.71□□□□□ -1.18
VPS52-222ENST00000495981 DISP3Q9P2K9 1392 aa7.71□□□□□ -1.18
VPS52-222ENST00000495981 MAPKBP1O60336 1514 aa7.7□□□□□ -1.18
VPS52-222ENST00000495981 WDR70Q9NW82 654 aa7.69□□□□□ -1.18
VPS52-222ENST00000495981 ERICH3Q5RHP9 1530 aa7.68□□□□□ -1.18
VPS52-222ENST00000495981 PPP1R37O75864 691 aa7.68□□□□□ -1.18
VPS52-222ENST00000495981 PDAP1Q13442 181 aaKnown RBP7.68□□□□□ -1.18
VPS52-222ENST00000495981 ZNF467Q7Z7K2 595 aaPredicted RBP7.68□□□□□ -1.18
VPS52-222ENST00000495981 ZC3H15Q8WU90 426 aaKnown RBP7.68□□□□□ -1.18
VPS52-222ENST00000495981 PCDHB8Q9UN66 801 aa7.68□□□□□ -1.18
VPS52-222ENST00000495981 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
VPS52-222ENST00000495981 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
VPS52-222ENST00000495981 FARP1Q9Y4F1 1045 aaPredicted RBP7.67□□□□□ -1.18
VPS52-222ENST00000495981 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
VPS52-222ENST00000495981 ADCY10Q96PN6 1610 aa7.66□□□□□ -1.18
VPS52-222ENST00000495981 TESPA1A2RU30 521 aaPredicted RBP7.65□□□□□ -1.18
VPS52-222ENST00000495981 WRNQ14191 1432 aaPredicted RBP eCLIP7.65□□□□□ -1.18
VPS52-222ENST00000495981 FBXO22Q8NEZ5 403 aa7.65□□□□□ -1.18
VPS52-222ENST00000495981 TSPYL2Q9H2G4 693 aaPredicted RBP7.64□□□□□ -1.19
VPS52-222ENST00000495981 TSPOAP1O95153 1857 aa7.64□□□□□ -1.19
VPS52-222ENST00000495981 FHAD1B1AJZ9 1412 aa7.63□□□□□ -1.19
VPS52-222ENST00000495981 SEMA3EO15041 775 aa7.63□□□□□ -1.19
VPS52-222ENST00000495981 PSEN1P49768 467 aa7.63□□□□□ -1.19
VPS52-222ENST00000495981 SLC24A3Q9HC58 644 aa7.62□□□□□ -1.19
VPS52-222ENST00000495981 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
VPS52-222ENST00000495981 CCDC61Q9Y6R9 512 aa7.62□□□□□ -1.19
VPS52-222ENST00000495981 HAX1O00165 279 aa7.61□□□□□ -1.19
VPS52-222ENST00000495981 E2F4Q16254 413 aa7.61□□□□□ -1.19
VPS52-222ENST00000495981 CERKQ8TCT0 537 aa7.61□□□□□ -1.19
VPS52-222ENST00000495981 PPRC1Q5VV67 1664 aaKnown RBP7.6□□□□□ -1.19
VPS52-222ENST00000495981 TTBK1Q5TCY1 1321 aaPredicted RBP7.6□□□□□ -1.19
VPS52-222ENST00000495981 ZNF579Q8NAF0 562 aaKnown RBP7.6□□□□□ -1.19
VPS52-222ENST00000495981 CUL7Q14999 1698 aa7.6□□□□□ -1.19
VPS52-222ENST00000495981 NCKAP5LQ9HCH0 1330 aa7.59□□□□□ -1.19
VPS52-222ENST00000495981 HSPA2P54652 639 aa7.59□□□□□ -1.19
VPS52-222ENST00000495981 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
VPS52-222ENST00000495981 ASXL2Q76L83 1435 aa7.59□□□□□ -1.19
VPS52-222ENST00000495981 ZMYND10O75800 440 aa7.58□□□□□ -1.2
VPS52-222ENST00000495981 EFCAB3Q8N7B9 438 aa7.58□□□□□ -1.2
VPS52-222ENST00000495981 HOMEZQ8IX15 550 aa7.57□□□□□ -1.2
VPS52-222ENST00000495981 PHF8Q9UPP1 1060 aa7.57□□□□□ -1.2
VPS52-222ENST00000495981 C19orf67A6NJJ6 358 aa7.56□□□□□ -1.2
VPS52-222ENST00000495981 IFNL1Q8IU54 200 aa7.56□□□□□ -1.2
VPS52-222ENST00000495981 PTPRMP28827 1452 aa7.55□□□□□ -1.2
VPS52-222ENST00000495981 PTPRGP23470 1445 aa7.54□□□□□ -1.2
VPS52-222ENST00000495981 CD44P16070 742 aaKnown RBP7.54□□□□□ -1.2
VPS52-222ENST00000495981 NLRP6P59044 892 aa7.54□□□□□ -1.2
VPS52-222ENST00000495981 MFSD10Q14728 455 aa7.54□□□□□ -1.2
VPS52-222ENST00000495981 GLI2P10070 1586 aa7.54□□□□□ -1.2
VPS52-222ENST00000495981 SOX12O15370 315 aa7.53□□□□□ -1.2
VPS52-222ENST00000495981 MS4A4AQ96JQ5 239 aa7.53□□□□□ -1.2
VPS52-222ENST00000495981 ARIH1Q9Y4X5 557 aaPredicted RBP7.53□□□□□ -1.2
VPS52-222ENST00000495981 PLB1Q6P1J6 1458 aa7.53□□□□□ -1.2
VPS52-222ENST00000495981 EPRSP07814 1512 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms