RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
CALD1-222ENST00000495522 ABCC5O15440 1437 aa21.8■■□□□ 1.08
CALD1-222ENST00000495522 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
CALD1-222ENST00000495522 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
CALD1-222ENST00000495522 ITSN2Q9NZM3 1697 aa21.78■■□□□ 1.08
CALD1-222ENST00000495522 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
CALD1-222ENST00000495522 MPHOSPH9Q99550 1183 aa21.77■■□□□ 1.07
CALD1-222ENST00000495522 HIRIP3Q9BW71 556 aaPredicted RBP21.75■■□□□ 1.07
CALD1-222ENST00000495522 ZNF644Q9H582 1327 aaPredicted RBP21.75■■□□□ 1.07
CALD1-222ENST00000495522 CAMSAP2Q08AD1 1489 aa21.73■■□□□ 1.07
CALD1-222ENST00000495522 CHD1O14646 1710 aa21.72■■□□□ 1.07
CALD1-222ENST00000495522 KIF14Q15058 1648 aa21.71■■□□□ 1.07
CALD1-222ENST00000495522 GPATCH8Q9UKJ3 1502 aaKnown RBP21.71■■□□□ 1.07
CALD1-222ENST00000495522 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
CALD1-222ENST00000495522 ABCA8O94911 1581 aa21.7■■□□□ 1.06
CALD1-222ENST00000495522 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
CALD1-222ENST00000495522 ADGBQ8N7X0 1667 aa21.68■■□□□ 1.06
CALD1-222ENST00000495522 CROCC2H7BZ55 1655 aa21.65■■□□□ 1.06
CALD1-222ENST00000495522 ANKRD30BQ9BXX2 1392 aa21.65■■□□□ 1.06
CALD1-222ENST00000495522 ANP32CO43423 234 aa21.64■■□□□ 1.06
CALD1-222ENST00000495522 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
CALD1-222ENST00000495522 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
CALD1-222ENST00000495522 NCOA1Q15788 1441 aa21.63■■□□□ 1.05
CALD1-222ENST00000495522 PLEKHD1A6NEE1 506 aa21.62■■□□□ 1.05
CALD1-222ENST00000495522 ATP10BO94823 1461 aa21.62■■□□□ 1.05
CALD1-222ENST00000495522 RPRD2Q5VT52 1461 aaKnown RBP21.62■■□□□ 1.05
CALD1-222ENST00000495522 FOXD1Q16676 465 aa21.61■■□□□ 1.05
CALD1-222ENST00000495522 SLC4A1APQ9BWU0 796 aaKnown RBP21.6■■□□□ 1.05
CALD1-222ENST00000495522 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
CALD1-222ENST00000495522 ABCC10Q5T3U5 1492 aa21.59■■□□□ 1.05
CALD1-222ENST00000495522 CDC42BPAQ5VT25 1732 aa21.59■■□□□ 1.05
CALD1-222ENST00000495522 L3MBTL2Q969R5 705 aa21.59■■□□□ 1.05
CALD1-222ENST00000495522 PZPP20742 1482 aa21.57■■□□□ 1.04
CALD1-222ENST00000495522 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
CALD1-222ENST00000495522 HSPA5P11021 654 aaKnown RBP21.56■■□□□ 1.04
CALD1-222ENST00000495522 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
CALD1-222ENST00000495522 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
CALD1-222ENST00000495522 PTPRGP23470 1445 aa21.54■■□□□ 1.04
CALD1-222ENST00000495522 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
CALD1-222ENST00000495522 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
CALD1-222ENST00000495522 SUPT16HQ9Y5B9 1047 aaKnown RBP21.49■■□□□ 1.03
CALD1-222ENST00000495522 ANKRD50Q9ULJ7 1429 aa21.48■■□□□ 1.03
CALD1-222ENST00000495522 C9orf84Q5VXU9 1444 aa21.48■■□□□ 1.03
CALD1-222ENST00000495522 KIAA1107Q9UPP5 1409 aa21.48■■□□□ 1.03
CALD1-222ENST00000495522 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
CALD1-222ENST00000495522 NBPF8Q3BBV2 869 aa21.45■■□□□ 1.02
CALD1-222ENST00000495522 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
CALD1-222ENST00000495522 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
CALD1-222ENST00000495522 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
CALD1-222ENST00000495522 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
CALD1-222ENST00000495522 PKD2Q13563 968 aa21.41■■□□□ 1.02
CALD1-222ENST00000495522 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
CALD1-222ENST00000495522 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
CALD1-222ENST00000495522 MBD5Q9P267 1494 aa21.39■■□□□ 1.02
CALD1-222ENST00000495522 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.02
CALD1-222ENST00000495522 CCDC7Q96M83 1385 aa21.38■■□□□ 1.01
CALD1-222ENST00000495522 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
CALD1-222ENST00000495522 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
CALD1-222ENST00000495522 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
CALD1-222ENST00000495522 NUP155O75694 1391 aa21.37■■□□□ 1.01
CALD1-222ENST00000495522 CCDC141Q6ZP82 1450 aa21.36■■□□□ 1.01
CALD1-222ENST00000495522 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
CALD1-222ENST00000495522 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
CALD1-222ENST00000495522 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
CALD1-222ENST00000495522 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
CALD1-222ENST00000495522 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
CALD1-222ENST00000495522 RSPH4AQ5TD94 716 aa21.33■■□□□ 1.01
CALD1-222ENST00000495522 ABCC2Q92887 1545 aa21.32■■□□□ 1
CALD1-222ENST00000495522 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
CALD1-222ENST00000495522 TTC37Q6PGP7 1564 aa21.3■■□□□ 1
CALD1-222ENST00000495522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.29■■□□□ 1
CALD1-222ENST00000495522 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
CALD1-222ENST00000495522 KIF7Q2M1P5 1343 aa21.27■■□□□ 1
CALD1-222ENST00000495522 ARHGEF12Q9NZN5 1544 aa21.27■■□□□ 1
CALD1-222ENST00000495522 MAST1Q9Y2H9 1570 aa21.27■■□□□ 1
CALD1-222ENST00000495522 SYCP2Q9BX26 1530 aa21.27■□□□□ 0.99
CALD1-222ENST00000495522 UHRF1BP1Q6BDS2 1440 aa21.26■□□□□ 0.99
CALD1-222ENST00000495522 MYO5CQ9NQX4 1742 aa21.25■□□□□ 0.99
CALD1-222ENST00000495522 USP47Q96K76 1375 aa21.24■□□□□ 0.99
CALD1-222ENST00000495522 PLEKHH2Q8IVE3 1493 aa21.23■□□□□ 0.99
CALD1-222ENST00000495522 PRKRIP1Q9H875 184 aaPredicted RBP21.23■□□□□ 0.99
CALD1-222ENST00000495522 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
CALD1-222ENST00000495522 RALGAPBQ86X10 1494 aa21.22■□□□□ 0.99
CALD1-222ENST00000495522 ZNF326Q5BKZ1 582 aaKnown RBP21.22■□□□□ 0.99
CALD1-222ENST00000495522 KDM5CP41229 1560 aa21.22■□□□□ 0.99
CALD1-222ENST00000495522 FKBP8Q14318 412 aa21.21■□□□□ 0.99
CALD1-222ENST00000495522 NEFLP07196 543 aa21.2■□□□□ 0.98
CALD1-222ENST00000495522 HNRNPUQ00839 825 aaKnown RBP eCLIP21.2■□□□□ 0.98
CALD1-222ENST00000495522 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
CALD1-222ENST00000495522 UNC13BO14795 1591 aa21.18■□□□□ 0.98
CALD1-222ENST00000495522 UHRF1BP1LA0JNW5 1464 aa21.18■□□□□ 0.98
CALD1-222ENST00000495522 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
CALD1-222ENST00000495522 BCORL1Q5H9F3 1711 aa21.17■□□□□ 0.98
CALD1-222ENST00000495522 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
CALD1-222ENST00000495522 PLCH2O75038 1416 aa21.13■□□□□ 0.97
CALD1-222ENST00000495522 CCDC184Q52MB2 194 aa21.13■□□□□ 0.97
CALD1-222ENST00000495522 CARD11Q9BXL7 1154 aa21.12■□□□□ 0.97
CALD1-222ENST00000495522 DUOX2Q9NRD8 1548 aa21.11■□□□□ 0.97
CALD1-222ENST00000495522 BCANQ96GW7 911 aa21.11■□□□□ 0.97
CALD1-222ENST00000495522 MRS2Q9HD23 443 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms