RNA–Protein interactions for RNA: ENST00000495211.2

GPM6B-211, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 683 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-211ENST00000495211 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
GPM6B-211ENST00000495211 MLECQ14165 292 aa12.74□□□□□ -0.37
GPM6B-211ENST00000495211 NCOA1Q15788 1441 aa12.71□□□□□ -0.38
GPM6B-211ENST00000495211 HSPA1LP34931 641 aa12.7□□□□□ -0.38
GPM6B-211ENST00000495211 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
GPM6B-211ENST00000495211 ATP10BO94823 1461 aa12.7□□□□□ -0.38
GPM6B-211ENST00000495211 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
GPM6B-211ENST00000495211 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
GPM6B-211ENST00000495211 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
GPM6B-211ENST00000495211 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
GPM6B-211ENST00000495211 ZNF335Q9H4Z2 1342 aaPredicted RBP12.64□□□□□ -0.39
GPM6B-211ENST00000495211 ATP10AO60312 1499 aa12.64□□□□□ -0.39
GPM6B-211ENST00000495211 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
GPM6B-211ENST00000495211 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
GPM6B-211ENST00000495211 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
GPM6B-211ENST00000495211 TOM1O60784 492 aa12.62□□□□□ -0.39
GPM6B-211ENST00000495211 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
GPM6B-211ENST00000495211 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
GPM6B-211ENST00000495211 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
GPM6B-211ENST00000495211 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
GPM6B-211ENST00000495211 C3P01024 1663 aa12.58□□□□□ -0.4
GPM6B-211ENST00000495211 PKD2Q13563 968 aa12.56□□□□□ -0.4
GPM6B-211ENST00000495211 PLA2R1Q13018 1463 aa12.54□□□□□ -0.4
GPM6B-211ENST00000495211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
GPM6B-211ENST00000495211 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
GPM6B-211ENST00000495211 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
GPM6B-211ENST00000495211 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
GPM6B-211ENST00000495211 SCAPERQ9BY12 1400 aa12.53□□□□□ -0.4
GPM6B-211ENST00000495211 CPS1P31327 1500 aa12.52□□□□□ -0.4
GPM6B-211ENST00000495211 RGS17Q9UGC6 210 aaPredicted RBP12.52□□□□□ -0.41
GPM6B-211ENST00000495211 NPATQ14207 1427 aa12.52□□□□□ -0.41
GPM6B-211ENST00000495211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.41
GPM6B-211ENST00000495211 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
GPM6B-211ENST00000495211 PTPRKQ15262 1439 aa12.51□□□□□ -0.41
GPM6B-211ENST00000495211 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
GPM6B-211ENST00000495211 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
GPM6B-211ENST00000495211 MSH5O43196 834 aa12.5□□□□□ -0.41
GPM6B-211ENST00000495211 TCOF1Q13428 1488 aaKnown RBP12.5□□□□□ -0.41
GPM6B-211ENST00000495211 AGLP35573 1532 aa12.5□□□□□ -0.41
GPM6B-211ENST00000495211 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
GPM6B-211ENST00000495211 SUPT5HO00267 1087 aaKnown RBP12.49□□□□□ -0.41
GPM6B-211ENST00000495211 NUP153P49790 1475 aaKnown RBP12.46□□□□□ -0.41
GPM6B-211ENST00000495211 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
GPM6B-211ENST00000495211 ZNF142P52746 1687 aaPredicted RBP12.45□□□□□ -0.42
GPM6B-211ENST00000495211 PLCH2O75038 1416 aa12.45□□□□□ -0.42
GPM6B-211ENST00000495211 KDM5CP41229 1560 aa12.43□□□□□ -0.42
GPM6B-211ENST00000495211 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
GPM6B-211ENST00000495211 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
GPM6B-211ENST00000495211 SRCAPQ6ZRS2 3230 aa12.42□□□□□ -0.42
GPM6B-211ENST00000495211 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
GPM6B-211ENST00000495211 ALKQ9UM73 1620 aa12.42□□□□□ -0.42
GPM6B-211ENST00000495211 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
GPM6B-211ENST00000495211 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
GPM6B-211ENST00000495211 POTEAQ6S8J7 498 aa12.41□□□□□ -0.42
GPM6B-211ENST00000495211 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
GPM6B-211ENST00000495211 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
GPM6B-211ENST00000495211 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
GPM6B-211ENST00000495211 EFCAB2Q5VUJ9 269 aa12.39□□□□□ -0.43
GPM6B-211ENST00000495211 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
GPM6B-211ENST00000495211 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
GPM6B-211ENST00000495211 MLH3Q9UHC1 1453 aa12.37□□□□□ -0.43
GPM6B-211ENST00000495211 SETD1AO15047 1707 aaKnown RBP12.37□□□□□ -0.43
GPM6B-211ENST00000495211 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
GPM6B-211ENST00000495211 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
GPM6B-211ENST00000495211 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.43
GPM6B-211ENST00000495211 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
GPM6B-211ENST00000495211 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
GPM6B-211ENST00000495211 RNF17Q9BXT8 1623 aaKnown RBP12.33□□□□□ -0.43
GPM6B-211ENST00000495211 POLR1AO95602 1720 aaPredicted RBP12.33□□□□□ -0.44
GPM6B-211ENST00000495211 VWDEQ8N2E2 1590 aa12.32□□□□□ -0.44
GPM6B-211ENST00000495211 NEURL4Q96JN8 1562 aa12.31□□□□□ -0.44
GPM6B-211ENST00000495211 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
GPM6B-211ENST00000495211 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
GPM6B-211ENST00000495211 SYNMO15061 1565 aa12.28□□□□□ -0.44
GPM6B-211ENST00000495211 ARHGAP5Q13017 1502 aa12.27□□□□□ -0.44
GPM6B-211ENST00000495211 LRRC7Q96NW7 1537 aa12.27□□□□□ -0.45
GPM6B-211ENST00000495211 CLTCQ00610 1675 aaKnown RBP12.26□□□□□ -0.45
GPM6B-211ENST00000495211 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
GPM6B-211ENST00000495211 MED14O60244 1454 aa12.24□□□□□ -0.45
GPM6B-211ENST00000495211 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
GPM6B-211ENST00000495211 KIDINS220Q9ULH0 1771 aa12.23□□□□□ -0.45
GPM6B-211ENST00000495211 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
GPM6B-211ENST00000495211 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
GPM6B-211ENST00000495211 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
GPM6B-211ENST00000495211 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
GPM6B-211ENST00000495211 KIF14Q15058 1648 aa12.21□□□□□ -0.46
GPM6B-211ENST00000495211 ABCC1P33527 1531 aa12.21□□□□□ -0.46
GPM6B-211ENST00000495211 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
GPM6B-211ENST00000495211 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
GPM6B-211ENST00000495211 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
GPM6B-211ENST00000495211 IQGAP1P46940 1657 aa12.18□□□□□ -0.46
GPM6B-211ENST00000495211 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
GPM6B-211ENST00000495211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
GPM6B-211ENST00000495211 ZNF772Q68DY9 489 aaPredicted RBP12.16□□□□□ -0.46
GPM6B-211ENST00000495211 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
GPM6B-211ENST00000495211 TNRQ92752 1358 aa12.16□□□□□ -0.46
GPM6B-211ENST00000495211 CLIP1P30622 1438 aa12.15□□□□□ -0.46
GPM6B-211ENST00000495211 TRIM52Q96A61 297 aa12.15□□□□□ -0.46
GPM6B-211ENST00000495211 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
GPM6B-211ENST00000495211 CDC42BPBQ9Y5S2 1711 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms