RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 NBPF8Q3BBV2 869 aa18.41■□□□□ 0.54
SUPT20H-222ENST00000495071 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
SUPT20H-222ENST00000495071 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
SUPT20H-222ENST00000495071 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
SUPT20H-222ENST00000495071 KDM6BO15054 1643 aa18.39■□□□□ 0.54
SUPT20H-222ENST00000495071 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
SUPT20H-222ENST00000495071 PPP4R2Q9NY27 417 aa18.38■□□□□ 0.53
SUPT20H-222ENST00000495071 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
SUPT20H-222ENST00000495071 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
SUPT20H-222ENST00000495071 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
SUPT20H-222ENST00000495071 DAPK1P53355 1430 aa18.35■□□□□ 0.53
SUPT20H-222ENST00000495071 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
SUPT20H-222ENST00000495071 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
SUPT20H-222ENST00000495071 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
SUPT20H-222ENST00000495071 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
SUPT20H-222ENST00000495071 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
SUPT20H-222ENST00000495071 ZBED9Q6R2W3 1325 aa18.31■□□□□ 0.52
SUPT20H-222ENST00000495071 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
SUPT20H-222ENST00000495071 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
SUPT20H-222ENST00000495071 ABCC5O15440 1437 aa18.31■□□□□ 0.52
SUPT20H-222ENST00000495071 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
SUPT20H-222ENST00000495071 WDR62O43379 1518 aa18.31■□□□□ 0.52
SUPT20H-222ENST00000495071 BCL11AQ9H165 835 aa18.3■□□□□ 0.52
SUPT20H-222ENST00000495071 MSH5O43196 834 aa18.29■□□□□ 0.52
SUPT20H-222ENST00000495071 FBLN2P98095 1184 aa18.28■□□□□ 0.52
SUPT20H-222ENST00000495071 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
SUPT20H-222ENST00000495071 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
SUPT20H-222ENST00000495071 PKD2Q13563 968 aa18.26■□□□□ 0.51
SUPT20H-222ENST00000495071 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
SUPT20H-222ENST00000495071 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
SUPT20H-222ENST00000495071 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
SUPT20H-222ENST00000495071 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
SUPT20H-222ENST00000495071 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
SUPT20H-222ENST00000495071 USP47Q96K76 1375 aa18.22■□□□□ 0.51
SUPT20H-222ENST00000495071 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
SUPT20H-222ENST00000495071 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
SUPT20H-222ENST00000495071 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
SUPT20H-222ENST00000495071 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
SUPT20H-222ENST00000495071 KDM2AQ9Y2K7 1162 aa18.2■□□□□ 0.5
SUPT20H-222ENST00000495071 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
SUPT20H-222ENST00000495071 DNMT1P26358 1616 aaKnown RBP18.19■□□□□ 0.5
SUPT20H-222ENST00000495071 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
SUPT20H-222ENST00000495071 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
SUPT20H-222ENST00000495071 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
SUPT20H-222ENST00000495071 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
SUPT20H-222ENST00000495071 TROQ12816 1431 aaPredicted RBP18.16■□□□□ 0.5
SUPT20H-222ENST00000495071 DISP1Q96F81 1524 aa18.16■□□□□ 0.5
SUPT20H-222ENST00000495071 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
SUPT20H-222ENST00000495071 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SUPT20H-222ENST00000495071 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
SUPT20H-222ENST00000495071 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
SUPT20H-222ENST00000495071 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.49
SUPT20H-222ENST00000495071 NUP155O75694 1391 aa18.14■□□□□ 0.49
SUPT20H-222ENST00000495071 PZPP20742 1482 aa18.14■□□□□ 0.49
SUPT20H-222ENST00000495071 IFT140Q96RY7 1462 aa18.14■□□□□ 0.49
SUPT20H-222ENST00000495071 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
SUPT20H-222ENST00000495071 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
SUPT20H-222ENST00000495071 RAPGEF6Q8TEU7 1601 aa18.13■□□□□ 0.49
SUPT20H-222ENST00000495071 PLB1Q6P1J6 1458 aa18.11■□□□□ 0.49
SUPT20H-222ENST00000495071 ANKRD50Q9ULJ7 1429 aa18.11■□□□□ 0.49
SUPT20H-222ENST00000495071 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
SUPT20H-222ENST00000495071 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
SUPT20H-222ENST00000495071 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
SUPT20H-222ENST00000495071 GPATCH8Q9UKJ3 1502 aaKnown RBP18.09■□□□□ 0.49
SUPT20H-222ENST00000495071 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
SUPT20H-222ENST00000495071 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.49
SUPT20H-222ENST00000495071 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.48
SUPT20H-222ENST00000495071 JPH4Q96JJ6 628 aa18.07■□□□□ 0.48
SUPT20H-222ENST00000495071 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
SUPT20H-222ENST00000495071 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
SUPT20H-222ENST00000495071 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
SUPT20H-222ENST00000495071 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
SUPT20H-222ENST00000495071 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
SUPT20H-222ENST00000495071 KIF15Q9NS87 1388 aa18.03■□□□□ 0.48
SUPT20H-222ENST00000495071 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
SUPT20H-222ENST00000495071 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.47
SUPT20H-222ENST00000495071 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
SUPT20H-222ENST00000495071 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
SUPT20H-222ENST00000495071 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
SUPT20H-222ENST00000495071 C9orf84Q5VXU9 1444 aa18■□□□□ 0.47
SUPT20H-222ENST00000495071 KIF14Q15058 1648 aa18■□□□□ 0.47
SUPT20H-222ENST00000495071 NBR1Q14596 966 aa18■□□□□ 0.47
SUPT20H-222ENST00000495071 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
SUPT20H-222ENST00000495071 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
SUPT20H-222ENST00000495071 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
SUPT20H-222ENST00000495071 RALBP1Q15311 655 aa17.99■□□□□ 0.47
SUPT20H-222ENST00000495071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
SUPT20H-222ENST00000495071 BCORL1Q5H9F3 1711 aa17.98■□□□□ 0.47
SUPT20H-222ENST00000495071 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
SUPT20H-222ENST00000495071 ADGBQ8N7X0 1667 aa17.97■□□□□ 0.47
SUPT20H-222ENST00000495071 RALGAPBQ86X10 1494 aa17.96■□□□□ 0.47
SUPT20H-222ENST00000495071 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
SUPT20H-222ENST00000495071 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
SUPT20H-222ENST00000495071 KDM5CP41229 1560 aa17.95■□□□□ 0.46
SUPT20H-222ENST00000495071 BRD4O60885 1362 aaPredicted RBP17.94■□□□□ 0.46
SUPT20H-222ENST00000495071 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
SUPT20H-222ENST00000495071 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
SUPT20H-222ENST00000495071 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
SUPT20H-222ENST00000495071 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
SUPT20H-222ENST00000495071 PAK3O75914 559 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms