RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 HMGXB3Q12766 1538 aa13.37□□□□□ -0.27
RPGR-210ENST00000494841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.273e-6■■■□□ 18.5
RPGR-210ENST00000494841 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
RPGR-210ENST00000494841 PPP1R37O75864 691 aa13.32□□□□□ -0.28
RPGR-210ENST00000494841 PDCD7Q8N8D1 485 aaKnown RBP13.32□□□□□ -0.28
RPGR-210ENST00000494841 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
RPGR-210ENST00000494841 SLC39A7Q92504 469 aa13.31□□□□□ -0.28
RPGR-210ENST00000494841 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
RPGR-210ENST00000494841 C7P10643 843 aa13.28□□□□□ -0.28
RPGR-210ENST00000494841 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
RPGR-210ENST00000494841 METRNQ9UJH8 293 aa13.27□□□□□ -0.29
RPGR-210ENST00000494841 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
RPGR-210ENST00000494841 PLCG2P16885 1265 aa13.26□□□□□ -0.29
RPGR-210ENST00000494841 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
RPGR-210ENST00000494841 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
RPGR-210ENST00000494841 SEC24BO95487 1268 aa13.23□□□□□ -0.29
RPGR-210ENST00000494841 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
RPGR-210ENST00000494841 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
RPGR-210ENST00000494841 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
RPGR-210ENST00000494841 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
RPGR-210ENST00000494841 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
RPGR-210ENST00000494841 NESP48681 1621 aa13.14□□□□□ -0.31
RPGR-210ENST00000494841 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
RPGR-210ENST00000494841 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
RPGR-210ENST00000494841 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
RPGR-210ENST00000494841 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
RPGR-210ENST00000494841 G3V3G9 751 aa13.06□□□□□ -0.32
RPGR-210ENST00000494841 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
RPGR-210ENST00000494841 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
RPGR-210ENST00000494841 CFTRP13569 1480 aa13.04□□□□□ -0.32
RPGR-210ENST00000494841 CRISPLD2Q9H0B8 497 aa13.04□□□□□ -0.32
RPGR-210ENST00000494841 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
RPGR-210ENST00000494841 POTEJP0CG39 1038 aa13□□□□□ -0.33
RPGR-210ENST00000494841 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
RPGR-210ENST00000494841 PDE4AP27815 886 aa12.97□□□□□ -0.33
RPGR-210ENST00000494841 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
RPGR-210ENST00000494841 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
RPGR-210ENST00000494841 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
RPGR-210ENST00000494841 MFSD10Q14728 455 aa12.96□□□□□ -0.33
RPGR-210ENST00000494841 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
RPGR-210ENST00000494841 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.33
RPGR-210ENST00000494841 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
RPGR-210ENST00000494841 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
RPGR-210ENST00000494841 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
RPGR-210ENST00000494841 KIF3CO14782 793 aa12.94□□□□□ -0.34
RPGR-210ENST00000494841 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
RPGR-210ENST00000494841 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
RPGR-210ENST00000494841 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
RPGR-210ENST00000494841 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
RPGR-210ENST00000494841 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
RPGR-210ENST00000494841 CEP164Q9UPV0 1460 aa12.89□□□□□ -0.35
RPGR-210ENST00000494841 DSG2Q14126 1118 aa12.88□□□□□ -0.35
RPGR-210ENST00000494841 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
RPGR-210ENST00000494841 FOXK1P85037 733 aa12.87□□□□□ -0.35
RPGR-210ENST00000494841 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
RPGR-210ENST00000494841 KCNV2Q8TDN2 545 aa12.83□□□□□ -0.36
RPGR-210ENST00000494841 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
RPGR-210ENST00000494841 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
RPGR-210ENST00000494841 E2F4Q16254 413 aa12.82□□□□□ -0.36
RPGR-210ENST00000494841 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
RPGR-210ENST00000494841 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
RPGR-210ENST00000494841 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
RPGR-210ENST00000494841 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
RPGR-210ENST00000494841 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
RPGR-210ENST00000494841 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
RPGR-210ENST00000494841 LHX8Q68G74 356 aa12.79□□□□□ -0.36
RPGR-210ENST00000494841 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
RPGR-210ENST00000494841 WDR62O43379 1518 aa12.77□□□□□ -0.37
RPGR-210ENST00000494841 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
RPGR-210ENST00000494841 CUX1P39880 1505 aa12.76□□□□□ -0.37
RPGR-210ENST00000494841 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
RPGR-210ENST00000494841 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
RPGR-210ENST00000494841 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
RPGR-210ENST00000494841 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
RPGR-210ENST00000494841 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
RPGR-210ENST00000494841 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
RPGR-210ENST00000494841 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
RPGR-210ENST00000494841 CUX2O14529 1486 aa12.7□□□□□ -0.38
RPGR-210ENST00000494841 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
RPGR-210ENST00000494841 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
RPGR-210ENST00000494841 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
RPGR-210ENST00000494841 BCANQ96GW7 911 aa12.67□□□□□ -0.38
RPGR-210ENST00000494841 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
RPGR-210ENST00000494841 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
RPGR-210ENST00000494841 DPYSL4O14531 572 aa12.66□□□□□ -0.38
RPGR-210ENST00000494841 SLC34A2O95436 690 aa12.66□□□□□ -0.38
RPGR-210ENST00000494841 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
RPGR-210ENST00000494841 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
RPGR-210ENST00000494841 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
RPGR-210ENST00000494841 SOGA1O94964 1423 aa12.64□□□□□ -0.39
RPGR-210ENST00000494841 NBR1Q14596 966 aa12.64□□□□□ -0.39
RPGR-210ENST00000494841 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
RPGR-210ENST00000494841 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
RPGR-210ENST00000494841 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
RPGR-210ENST00000494841 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
RPGR-210ENST00000494841 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
RPGR-210ENST00000494841 PDIA6Q15084 440 aa12.59□□□□□ -0.39
RPGR-210ENST00000494841 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
RPGR-210ENST00000494841 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
RPGR-210ENST00000494841 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms