RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 ZFYVE16Q7Z3T8 1539 aa11.94□□□□□ -0.5
FN1-225ENST00000494446 P3H3Q8IVL6 736 aa11.93□□□□□ -0.5
FN1-225ENST00000494446 CFAP74Q9C0B2 1584 aa11.92□□□□□ -0.5
FN1-225ENST00000494446 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
FN1-225ENST00000494446 CEBPAP49715 358 aaPredicted RBP11.92□□□□□ -0.5
FN1-225ENST00000494446 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
FN1-225ENST00000494446 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
FN1-225ENST00000494446 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
FN1-225ENST00000494446 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
FN1-225ENST00000494446 HECW1Q76N89 1606 aa11.89□□□□□ -0.51
FN1-225ENST00000494446 PTPRTO14522 1441 aa11.88□□□□□ -0.51
FN1-225ENST00000494446 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
FN1-225ENST00000494446 ARHGEF12Q9NZN5 1544 aa11.88□□□□□ -0.51
FN1-225ENST00000494446 IQSEC2Q5JU85 1478 aa11.87□□□□□ -0.51
FN1-225ENST00000494446 MAGI2Q86UL8 1455 aa11.86□□□□□ -0.51
FN1-225ENST00000494446 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
FN1-225ENST00000494446 C3P01024 1663 aa11.84□□□□□ -0.51
FN1-225ENST00000494446 ATP10AO60312 1499 aa11.83□□□□□ -0.52
FN1-225ENST00000494446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.52
FN1-225ENST00000494446 PLEKHD1A6NEE1 506 aa11.81□□□□□ -0.52
FN1-225ENST00000494446 MED1Q15648 1581 aaPredicted RBP11.8□□□□□ -0.52
FN1-225ENST00000494446 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
FN1-225ENST00000494446 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
FN1-225ENST00000494446 SAMD9Q5K651 1589 aa11.79□□□□□ -0.52
FN1-225ENST00000494446 SCAPERQ9BY12 1400 aa11.79□□□□□ -0.52
FN1-225ENST00000494446 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.52
FN1-225ENST00000494446 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
FN1-225ENST00000494446 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
FN1-225ENST00000494446 MYO5CQ9NQX4 1742 aa11.75□□□□□ -0.53
FN1-225ENST00000494446 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
FN1-225ENST00000494446 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
FN1-225ENST00000494446 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
FN1-225ENST00000494446 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
FN1-225ENST00000494446 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
FN1-225ENST00000494446 HSPA1LP34931 641 aa11.73□□□□□ -0.53
FN1-225ENST00000494446 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
FN1-225ENST00000494446 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
FN1-225ENST00000494446 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
FN1-225ENST00000494446 PLCH2O75038 1416 aa11.71□□□□□ -0.53
FN1-225ENST00000494446 PIP4K2BP78356 416 aa11.71□□□□□ -0.53
FN1-225ENST00000494446 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.54
FN1-225ENST00000494446 EFCAB2Q5VUJ9 269 aa11.69□□□□□ -0.54
FN1-225ENST00000494446 ZNF518AQ6AHZ1 1483 aa11.69□□□□□ -0.54
FN1-225ENST00000494446 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
FN1-225ENST00000494446 CDK13Q14004 1512 aaKnown RBP11.67□□□□□ -0.54
FN1-225ENST00000494446 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
FN1-225ENST00000494446 KDM5CP41229 1560 aa11.67□□□□□ -0.54
FN1-225ENST00000494446 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
FN1-225ENST00000494446 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
FN1-225ENST00000494446 AGLP35573 1532 aa11.65□□□□□ -0.55
FN1-225ENST00000494446 TOM1O60784 492 aa11.64□□□□□ -0.55
FN1-225ENST00000494446 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
FN1-225ENST00000494446 CNTLNQ9NXG0 1405 aa11.63□□□□□ -0.55
FN1-225ENST00000494446 PKD2Q13563 968 aa11.63□□□□□ -0.55
FN1-225ENST00000494446 ARHGAP5Q13017 1502 aa11.63□□□□□ -0.55
FN1-225ENST00000494446 MYO3AQ8NEV4 1616 aa11.63□□□□□ -0.55
FN1-225ENST00000494446 KIF14Q15058 1648 aa11.62□□□□□ -0.55
FN1-225ENST00000494446 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
FN1-225ENST00000494446 NPATQ14207 1427 aa11.61□□□□□ -0.55
FN1-225ENST00000494446 CDC42BPBQ9Y5S2 1711 aa11.61□□□□□ -0.55
FN1-225ENST00000494446 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
FN1-225ENST00000494446 CEP170BQ9Y4F5 1589 aaPredicted RBP11.6□□□□□ -0.55
FN1-225ENST00000494446 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
FN1-225ENST00000494446 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
FN1-225ENST00000494446 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
FN1-225ENST00000494446 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
FN1-225ENST00000494446 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
FN1-225ENST00000494446 ZMYM3Q14202 1370 aa11.59□□□□□ -0.55
FN1-225ENST00000494446 ITSN2Q9NZM3 1697 aa11.59□□□□□ -0.55
FN1-225ENST00000494446 CPS1P31327 1500 aa11.57□□□□□ -0.56
FN1-225ENST00000494446 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
FN1-225ENST00000494446 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
FN1-225ENST00000494446 PTPRKQ15262 1439 aa11.54□□□□□ -0.56
FN1-225ENST00000494446 CDK11AQ9UQ88 783 aaPredicted RBP11.54□□□□□ -0.56
FN1-225ENST00000494446 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
FN1-225ENST00000494446 ALKQ9UM73 1620 aa11.53□□□□□ -0.56
FN1-225ENST00000494446 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
FN1-225ENST00000494446 ABCC1P33527 1531 aa11.53□□□□□ -0.56
FN1-225ENST00000494446 PREX2Q70Z35 1606 aa11.53□□□□□ -0.56
FN1-225ENST00000494446 LRRIQ1Q96JM4 1722 aa11.52□□□□□ -0.57
FN1-225ENST00000494446 NEURL4Q96JN8 1562 aa11.51□□□□□ -0.57
FN1-225ENST00000494446 CLIP1P30622 1438 aa11.51□□□□□ -0.57
FN1-225ENST00000494446 SETD1AO15047 1707 aaKnown RBP11.5□□□□□ -0.57
FN1-225ENST00000494446 TROQ12816 1431 aaPredicted RBP11.5□□□□□ -0.57
FN1-225ENST00000494446 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
FN1-225ENST00000494446 A2ML1A8K2U0 1454 aa11.49□□□□□ -0.57
FN1-225ENST00000494446 SAMD9LQ8IVG5 1584 aa11.49□□□□□ -0.57
FN1-225ENST00000494446 VWDEQ8N2E2 1590 aa11.49□□□□□ -0.57
FN1-225ENST00000494446 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
FN1-225ENST00000494446 GGT6Q6P531 493 aa11.47□□□□□ -0.57
FN1-225ENST00000494446 POTEAQ6S8J7 498 aa11.46□□□□□ -0.57
FN1-225ENST00000494446 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.58
FN1-225ENST00000494446 SPAG9O60271 1321 aaKnown RBP11.45□□□□□ -0.58
FN1-225ENST00000494446 FMN1Q68DA7 1419 aa11.44□□□□□ -0.58
FN1-225ENST00000494446 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
FN1-225ENST00000494446 ZNF777Q9ULD5 760 aaPredicted RBP11.44□□□□□ -0.58
FN1-225ENST00000494446 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
FN1-225ENST00000494446 PLXNC1O60486 1568 aa11.43□□□□□ -0.58
FN1-225ENST00000494446 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
FN1-225ENST00000494446 A2MP01023 1474 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms