RNA–Protein interactions for RNA: ENST00000494424.1

TSPAN6-202, Transcript of tetraspanin 6, humanhuman

TSL 2

Gene TSPAN6, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-202ENST00000494424 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
TSPAN6-202ENST00000494424 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
TSPAN6-202ENST00000494424 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
TSPAN6-202ENST00000494424 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.52
TSPAN6-202ENST00000494424 RIMS1Q86UR5 1692 aaKnown RBP11.77□□□□□ -0.53
TSPAN6-202ENST00000494424 PTPRTO14522 1441 aa11.77□□□□□ -0.53
TSPAN6-202ENST00000494424 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
TSPAN6-202ENST00000494424 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
TSPAN6-202ENST00000494424 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
TSPAN6-202ENST00000494424 PHLDB1Q86UU1 1377 aa11.75□□□□□ -0.53
TSPAN6-202ENST00000494424 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
TSPAN6-202ENST00000494424 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
TSPAN6-202ENST00000494424 STRCQ7RTU9 1775 aa11.7□□□□□ -0.54
TSPAN6-202ENST00000494424 ZCCHC11Q5TAX3 1644 aaKnown RBP11.7□□□□□ -0.54
TSPAN6-202ENST00000494424 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
TSPAN6-202ENST00000494424 FKBP8Q14318 412 aa11.69□□□□□ -0.54
TSPAN6-202ENST00000494424 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
TSPAN6-202ENST00000494424 PREX1Q8TCU6 1659 aa11.67□□□□□ -0.54
TSPAN6-202ENST00000494424 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
TSPAN6-202ENST00000494424 RAPGEF3O95398 923 aa11.64□□□□□ -0.55
TSPAN6-202ENST00000494424 HSPA1LP34931 641 aa11.64□□□□□ -0.55
TSPAN6-202ENST00000494424 KCNH8Q96L42 1107 aa11.64□□□□□ -0.55
TSPAN6-202ENST00000494424 TTC37Q6PGP7 1564 aa11.62□□□□□ -0.55
TSPAN6-202ENST00000494424 FANCAO15360 1455 aa11.62□□□□□ -0.55
TSPAN6-202ENST00000494424 UHRF1BP1Q6BDS2 1440 aa11.61□□□□□ -0.55
TSPAN6-202ENST00000494424 PROM2Q8N271 834 aa11.61□□□□□ -0.55
TSPAN6-202ENST00000494424 ARHGEF40Q8TER5 1519 aa11.6□□□□□ -0.55
TSPAN6-202ENST00000494424 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
TSPAN6-202ENST00000494424 NEO1Q92859 1461 aa11.57□□□□□ -0.56
TSPAN6-202ENST00000494424 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
TSPAN6-202ENST00000494424 AKNAQ7Z591 1439 aa11.56□□□□□ -0.56
TSPAN6-202ENST00000494424 SETD1BQ9UPS6 1966 aaKnown RBP11.55□□□□□ -0.56
TSPAN6-202ENST00000494424 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
TSPAN6-202ENST00000494424 FER1L4A9Z1Z3 1794 aa11.54□□□□□ -0.56
TSPAN6-202ENST00000494424 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
TSPAN6-202ENST00000494424 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
TSPAN6-202ENST00000494424 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
TSPAN6-202ENST00000494424 TOM1O60784 492 aa11.52□□□□□ -0.57
TSPAN6-202ENST00000494424 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
TSPAN6-202ENST00000494424 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
TSPAN6-202ENST00000494424 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
TSPAN6-202ENST00000494424 PIP4K2BP78356 416 aa11.5□□□□□ -0.57
TSPAN6-202ENST00000494424 MLECQ14165 292 aa11.5□□□□□ -0.57
TSPAN6-202ENST00000494424 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
TSPAN6-202ENST00000494424 ZNF335Q9H4Z2 1342 aaPredicted RBP11.5□□□□□ -0.57
TSPAN6-202ENST00000494424 IGF1RP08069 1367 aa11.5□□□□□ -0.57
TSPAN6-202ENST00000494424 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
TSPAN6-202ENST00000494424 ARHGEF12Q9NZN5 1544 aa11.49□□□□□ -0.57
TSPAN6-202ENST00000494424 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
TSPAN6-202ENST00000494424 FHOD3Q2V2M9 1422 aa11.47□□□□□ -0.57
TSPAN6-202ENST00000494424 ABCA9Q8IUA7 1624 aa11.46□□□□□ -0.57
TSPAN6-202ENST00000494424 EFCAB5A4FU69 1503 aa11.45□□□□□ -0.58
TSPAN6-202ENST00000494424 MAGI2Q86UL8 1455 aa11.45□□□□□ -0.58
TSPAN6-202ENST00000494424 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
TSPAN6-202ENST00000494424 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
TSPAN6-202ENST00000494424 ZFYVE16Q7Z3T8 1539 aa11.44□□□□□ -0.58
TSPAN6-202ENST00000494424 UGGT2Q9NYU1 1516 aa11.44□□□□□ -0.58
TSPAN6-202ENST00000494424 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
TSPAN6-202ENST00000494424 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
TSPAN6-202ENST00000494424 KIAA0556O60303 1618 aa11.42□□□□□ -0.58
TSPAN6-202ENST00000494424 RICTORQ6R327 1708 aa11.41□□□□□ -0.58
TSPAN6-202ENST00000494424 SIGLEC1Q9BZZ2 1709 aa11.41□□□□□ -0.58
TSPAN6-202ENST00000494424 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.58
TSPAN6-202ENST00000494424 ABCA8O94911 1581 aa11.4□□□□□ -0.58
TSPAN6-202ENST00000494424 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
TSPAN6-202ENST00000494424 PKD2Q13563 968 aa11.39□□□□□ -0.59
TSPAN6-202ENST00000494424 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
TSPAN6-202ENST00000494424 POTEAQ6S8J7 498 aa11.39□□□□□ -0.59
TSPAN6-202ENST00000494424 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
TSPAN6-202ENST00000494424 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
TSPAN6-202ENST00000494424 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
TSPAN6-202ENST00000494424 CAMSAP1Q5T5Y3 1602 aa11.37□□□□□ -0.59
TSPAN6-202ENST00000494424 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
TSPAN6-202ENST00000494424 CPS1P31327 1500 aa11.35□□□□□ -0.59
TSPAN6-202ENST00000494424 ATP10AO60312 1499 aa11.35□□□□□ -0.59
TSPAN6-202ENST00000494424 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
TSPAN6-202ENST00000494424 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
TSPAN6-202ENST00000494424 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
TSPAN6-202ENST00000494424 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
TSPAN6-202ENST00000494424 FAM9AQ8IZU1 332 aaPredicted RBP11.31□□□□□ -0.6
TSPAN6-202ENST00000494424 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
TSPAN6-202ENST00000494424 ATP10BO94823 1461 aa11.31□□□□□ -0.6
TSPAN6-202ENST00000494424 HECW1Q76N89 1606 aa11.3□□□□□ -0.6
TSPAN6-202ENST00000494424 C3P01024 1663 aa11.3□□□□□ -0.6
TSPAN6-202ENST00000494424 ESF1Q9H501 851 aaKnown RBP11.29□□□□□ -0.6
TSPAN6-202ENST00000494424 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
TSPAN6-202ENST00000494424 TCOF1Q13428 1488 aaKnown RBP11.29□□□□□ -0.6
TSPAN6-202ENST00000494424 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
TSPAN6-202ENST00000494424 NPATQ14207 1427 aa11.28□□□□□ -0.6
TSPAN6-202ENST00000494424 POTEHQ6S545 545 aa11.28□□□□□ -0.6
TSPAN6-202ENST00000494424 RAPGEF2Q9Y4G8 1499 aa11.27□□□□□ -0.6
TSPAN6-202ENST00000494424 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
TSPAN6-202ENST00000494424 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
TSPAN6-202ENST00000494424 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
TSPAN6-202ENST00000494424 SHANK2Q9UPX8 1470 aa11.25□□□□□ -0.61
TSPAN6-202ENST00000494424 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
TSPAN6-202ENST00000494424 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
TSPAN6-202ENST00000494424 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
TSPAN6-202ENST00000494424 AGLP35573 1532 aa11.21□□□□□ -0.61
TSPAN6-202ENST00000494424 MIER1Q8N108 512 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms