RNA–Protein interactions for RNA: ENST00000494367.1

HLA-J-203, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 1,087 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-203ENST00000494367 AKNAQ7Z591 1439 aa27.18■■□□□ 1.94
HLA-J-203ENST00000494367 DENND4BO75064 1496 aaPredicted RBP27.17■■□□□ 1.94
HLA-J-203ENST00000494367 MLECQ14165 292 aa27.13■■□□□ 1.93
HLA-J-203ENST00000494367 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
HLA-J-203ENST00000494367 ZFYVE16Q7Z3T8 1539 aa27.11■■□□□ 1.93
HLA-J-203ENST00000494367 ARHGAP35Q9NRY4 1499 aa27.1■■□□□ 1.93
HLA-J-203ENST00000494367 ZMYM4Q5VZL5 1548 aa27.09■■□□□ 1.93
HLA-J-203ENST00000494367 FMN1Q68DA7 1419 aa27.08■■□□□ 1.93
HLA-J-203ENST00000494367 CFAP74Q9C0B2 1584 aa27.06■■□□□ 1.92
HLA-J-203ENST00000494367 IQSEC2Q5JU85 1478 aa27.05■■□□□ 1.92
HLA-J-203ENST00000494367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.03■■□□□ 1.92
HLA-J-203ENST00000494367 PTPRTO14522 1441 aa27.02■■□□□ 1.92
HLA-J-203ENST00000494367 LTBP4Q8N2S1 1624 aa27.01■■□□□ 1.92
HLA-J-203ENST00000494367 CDK13Q14004 1512 aaKnown RBP27.01■■□□□ 1.91
HLA-J-203ENST00000494367 UHRF1BP1Q6BDS2 1440 aa27.01■■□□□ 1.91
HLA-J-203ENST00000494367 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
HLA-J-203ENST00000494367 MAGI2Q86UL8 1455 aa27■■□□□ 1.91
HLA-J-203ENST00000494367 CEBPAP49715 358 aaPredicted RBP26.98■■□□□ 1.91
HLA-J-203ENST00000494367 HECW1Q76N89 1606 aa26.96■■□□□ 1.91
HLA-J-203ENST00000494367 ATP1B4Q9UN42 357 aaPredicted RBP26.95■■□□□ 1.9
HLA-J-203ENST00000494367 CDK11AQ9UQ88 783 aaPredicted RBP26.94■■□□□ 1.9
HLA-J-203ENST00000494367 SETD1BQ9UPS6 1966 aaKnown RBP26.94■■□□□ 1.9
HLA-J-203ENST00000494367 PLCH2O75038 1416 aa26.91■■□□□ 1.9
HLA-J-203ENST00000494367 C9orf84Q5VXU9 1444 aa26.86■■□□□ 1.89
HLA-J-203ENST00000494367 ATP10AO60312 1499 aa26.86■■□□□ 1.89
HLA-J-203ENST00000494367 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
HLA-J-203ENST00000494367 EFCAB2Q5VUJ9 269 aa26.82■■□□□ 1.88
HLA-J-203ENST00000494367 LRRIQ1Q96JM4 1722 aa26.82■■□□□ 1.88
HLA-J-203ENST00000494367 CASKIN1Q8WXD9 1431 aa26.82■■□□□ 1.88
HLA-J-203ENST00000494367 UBAP1LF5GYI3 381 aa26.81■■□□□ 1.88
HLA-J-203ENST00000494367 SCAPERQ9BY12 1400 aa26.79■■□□□ 1.88
HLA-J-203ENST00000494367 MED1Q15648 1581 aaPredicted RBP26.79■■□□□ 1.88
HLA-J-203ENST00000494367 C3P01024 1663 aa26.77■■□□□ 1.88
HLA-J-203ENST00000494367 KIF14Q15058 1648 aa26.77■■□□□ 1.88
HLA-J-203ENST00000494367 MYO5CQ9NQX4 1742 aa26.76■■□□□ 1.88
HLA-J-203ENST00000494367 CLIP1P30622 1438 aa26.76■■□□□ 1.87
HLA-J-203ENST00000494367 NCOA1Q15788 1441 aa26.75■■□□□ 1.87
HLA-J-203ENST00000494367 CCDC18Q5T9S5 1454 aa26.74■■□□□ 1.87
HLA-J-203ENST00000494367 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
HLA-J-203ENST00000494367 ZNF335Q9H4Z2 1342 aaPredicted RBP26.65■■□□□ 1.86
HLA-J-203ENST00000494367 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
HLA-J-203ENST00000494367 ARHGAP5Q13017 1502 aa26.65■■□□□ 1.86
HLA-J-203ENST00000494367 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
HLA-J-203ENST00000494367 CDC42BPBQ9Y5S2 1711 aa26.63■■□□□ 1.85
HLA-J-203ENST00000494367 AFAP1Q8N556 730 aa26.62■■□□□ 1.85
HLA-J-203ENST00000494367 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
HLA-J-203ENST00000494367 ESF1Q9H501 851 aaKnown RBP26.61■■□□□ 1.85
HLA-J-203ENST00000494367 HSPA1LP34931 641 aa26.59■■□□□ 1.85
HLA-J-203ENST00000494367 KDM5CP41229 1560 aa26.58■■□□□ 1.85
HLA-J-203ENST00000494367 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
HLA-J-203ENST00000494367 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
HLA-J-203ENST00000494367 REREQ9P2R6 1566 aa26.57■■□□□ 1.84
HLA-J-203ENST00000494367 DIP2CQ9Y2E4 1556 aa26.57■■□□□ 1.84
HLA-J-203ENST00000494367 SCAF1Q9H7N4 1312 aaKnown RBP26.57■■□□□ 1.84
HLA-J-203ENST00000494367 MYT1LQ9UL68 1186 aa26.54■■□□□ 1.84
HLA-J-203ENST00000494367 NCKAP5LQ9HCH0 1330 aa26.54■■□□□ 1.84
HLA-J-203ENST00000494367 CDC42BPAQ5VT25 1732 aa26.52■■□□□ 1.84
HLA-J-203ENST00000494367 MLH3Q9UHC1 1453 aa26.52■■□□□ 1.84
HLA-J-203ENST00000494367 AGLP35573 1532 aa26.51■■□□□ 1.83
HLA-J-203ENST00000494367 ABCC1P33527 1531 aa26.5■■□□□ 1.83
HLA-J-203ENST00000494367 PIP4K2BP78356 416 aa26.5■■□□□ 1.83
HLA-J-203ENST00000494367 ABCA6Q8N139 1617 aa26.5■■□□□ 1.83
HLA-J-203ENST00000494367 SUPT6HQ7KZ85 1726 aaKnown RBP26.48■■□□□ 1.83
HLA-J-203ENST00000494367 GPATCH8Q9UKJ3 1502 aaKnown RBP26.48■■□□□ 1.83
HLA-J-203ENST00000494367 CNTLNQ9NXG0 1405 aa26.48■■□□□ 1.83
HLA-J-203ENST00000494367 NPATQ14207 1427 aa26.45■■□□□ 1.82
HLA-J-203ENST00000494367 ITSN2Q9NZM3 1697 aa26.44■■□□□ 1.82
HLA-J-203ENST00000494367 PKD2Q13563 968 aa26.44■■□□□ 1.82
HLA-J-203ENST00000494367 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
HLA-J-203ENST00000494367 PLA2R1Q13018 1463 aa26.42■■□□□ 1.82
HLA-J-203ENST00000494367 MROH2AA6NES4 1674 aa26.42■■□□□ 1.82
HLA-J-203ENST00000494367 TOM1O60784 492 aa26.42■■□□□ 1.82
HLA-J-203ENST00000494367 MTUS2Q5JR59 1369 aa26.41■■□□□ 1.82
HLA-J-203ENST00000494367 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
HLA-J-203ENST00000494367 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
HLA-J-203ENST00000494367 SAMD9LQ8IVG5 1584 aa26.39■■□□□ 1.82
HLA-J-203ENST00000494367 CFDP1Q9UEE9 299 aaPredicted RBP26.39■■□□□ 1.82
HLA-J-203ENST00000494367 KIAA1107Q9UPP5 1409 aa26.39■■□□□ 1.81
HLA-J-203ENST00000494367 TCOF1Q13428 1488 aaKnown RBP26.38■■□□□ 1.81
HLA-J-203ENST00000494367 KIDINS220Q9ULH0 1771 aa26.38■■□□□ 1.81
HLA-J-203ENST00000494367 CCNB3Q8WWL7 1395 aa26.37■■□□□ 1.81
HLA-J-203ENST00000494367 MYO3AQ8NEV4 1616 aa26.37■■□□□ 1.81
HLA-J-203ENST00000494367 PPP6R1Q9UPN7 881 aa26.37■■□□□ 1.81
HLA-J-203ENST00000494367 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
HLA-J-203ENST00000494367 PLEKHH2Q8IVE3 1493 aa26.34■■□□□ 1.81
HLA-J-203ENST00000494367 CEP170BQ9Y4F5 1589 aaPredicted RBP26.33■■□□□ 1.81
HLA-J-203ENST00000494367 CPS1P31327 1500 aa26.32■■□□□ 1.8
HLA-J-203ENST00000494367 SYCP2Q9BX26 1530 aa26.32■■□□□ 1.8
HLA-J-203ENST00000494367 SPAG9O60271 1321 aaKnown RBP26.31■■□□□ 1.8
HLA-J-203ENST00000494367 ZMYM3Q14202 1370 aa26.31■■□□□ 1.8
HLA-J-203ENST00000494367 EHBP1L1Q8N3D4 1523 aa26.3■■□□□ 1.8
HLA-J-203ENST00000494367 LOC105371045A0A1W2PR82 267 aa26.3■■□□□ 1.8
HLA-J-203ENST00000494367 TIAM1Q13009 1591 aa26.26■■□□□ 1.79
HLA-J-203ENST00000494367 PTPRKQ15262 1439 aa26.24■■□□□ 1.79
HLA-J-203ENST00000494367 CLTCQ00610 1675 aaKnown RBP26.24■■□□□ 1.79
HLA-J-203ENST00000494367 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
HLA-J-203ENST00000494367 ATP7AQ04656 1500 aa26.22■■□□□ 1.79
HLA-J-203ENST00000494367 MBD5Q9P267 1494 aa26.22■■□□□ 1.79
HLA-J-203ENST00000494367 SHANK2Q9UPX8 1470 aa26.21■■□□□ 1.79
HLA-J-203ENST00000494367 POLR1AO95602 1720 aaPredicted RBP26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms