RNA–Protein interactions for RNA: ENST00000493707.1

UBE2E1-210, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 857 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-210ENST00000493707 ST18O60284 1047 aa11.4□□□□□ -0.58
UBE2E1-210ENST00000493707 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
UBE2E1-210ENST00000493707 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
UBE2E1-210ENST00000493707 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
UBE2E1-210ENST00000493707 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
UBE2E1-210ENST00000493707 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
UBE2E1-210ENST00000493707 NESP48681 1621 aa11.37□□□□□ -0.59
UBE2E1-210ENST00000493707 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
UBE2E1-210ENST00000493707 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
UBE2E1-210ENST00000493707 G3V3G9 751 aa11.3□□□□□ -0.6
UBE2E1-210ENST00000493707 STK25O00506 426 aa11.3□□□□□ -0.6
UBE2E1-210ENST00000493707 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
UBE2E1-210ENST00000493707 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
UBE2E1-210ENST00000493707 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
UBE2E1-210ENST00000493707 SOX12O15370 315 aa11.28□□□□□ -0.6
UBE2E1-210ENST00000493707 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
UBE2E1-210ENST00000493707 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
UBE2E1-210ENST00000493707 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
UBE2E1-210ENST00000493707 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
UBE2E1-210ENST00000493707 KIF21AQ7Z4S6 1674 aa11.26□□□□□ -0.61
UBE2E1-210ENST00000493707 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
UBE2E1-210ENST00000493707 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
UBE2E1-210ENST00000493707 SNPHO15079 494 aa11.23□□□□□ -0.61
UBE2E1-210ENST00000493707 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
UBE2E1-210ENST00000493707 THOC2Q8NI27 1593 aaKnown RBP11.21□□□□□ -0.61
UBE2E1-210ENST00000493707 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
UBE2E1-210ENST00000493707 NLRP6P59044 892 aa11.2□□□□□ -0.62
UBE2E1-210ENST00000493707 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
UBE2E1-210ENST00000493707 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
UBE2E1-210ENST00000493707 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
UBE2E1-210ENST00000493707 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
UBE2E1-210ENST00000493707 CUX2O14529 1486 aa11.16□□□□□ -0.62
UBE2E1-210ENST00000493707 CCDC88BA6NC98 1476 aa11.15□□□□□ -0.62
UBE2E1-210ENST00000493707 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
UBE2E1-210ENST00000493707 PDS5BQ9NTI5 1447 aa11.15□□□□□ -0.62
UBE2E1-210ENST00000493707 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
UBE2E1-210ENST00000493707 PPP1R37O75864 691 aa11.13□□□□□ -0.63
UBE2E1-210ENST00000493707 EMP3P54852 163 aa11.13□□□□□ -0.63
UBE2E1-210ENST00000493707 CFTRP13569 1480 aa11.12□□□□□ -0.63
UBE2E1-210ENST00000493707 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
UBE2E1-210ENST00000493707 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
UBE2E1-210ENST00000493707 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
UBE2E1-210ENST00000493707 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
UBE2E1-210ENST00000493707 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
UBE2E1-210ENST00000493707 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
UBE2E1-210ENST00000493707 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
UBE2E1-210ENST00000493707 WDR62O43379 1518 aa11.07□□□□□ -0.64
UBE2E1-210ENST00000493707 SUPT5HO00267 1087 aaKnown RBP11.05□□□□□ -0.64
UBE2E1-210ENST00000493707 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
UBE2E1-210ENST00000493707 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
UBE2E1-210ENST00000493707 HS6ST3Q8IZP7 471 aa11.04□□□□□ -0.64
UBE2E1-210ENST00000493707 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.644e-8■□□□□ 10.3
UBE2E1-210ENST00000493707 C2orf72A6NCS6 295 aa11.03□□□□□ -0.64
UBE2E1-210ENST00000493707 NKX1-1Q15270 411 aaPredicted RBP11.02□□□□□ -0.65
UBE2E1-210ENST00000493707 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
UBE2E1-210ENST00000493707 KIF3CO14782 793 aa11□□□□□ -0.65
UBE2E1-210ENST00000493707 KRTAP3-3Q9BYR6 98 aa11□□□□□ -0.65
UBE2E1-210ENST00000493707 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
UBE2E1-210ENST00000493707 ARSIQ5FYB1 569 aa10.99□□□□□ -0.65
UBE2E1-210ENST00000493707 GPR153Q6NV75 609 aa10.99□□□□□ -0.65
UBE2E1-210ENST00000493707 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
UBE2E1-210ENST00000493707 ERBB3P21860 1342 aa10.97□□□□□ -0.65
UBE2E1-210ENST00000493707 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
UBE2E1-210ENST00000493707 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
UBE2E1-210ENST00000493707 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
UBE2E1-210ENST00000493707 SPNS2Q8IVW8 549 aa10.95□□□□□ -0.66
UBE2E1-210ENST00000493707 TOPBP1Q92547 1522 aa10.94□□□□□ -0.66
UBE2E1-210ENST00000493707 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
UBE2E1-210ENST00000493707 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
UBE2E1-210ENST00000493707 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
UBE2E1-210ENST00000493707 ZSWIM6Q9HCJ5 1215 aa10.89□□□□□ -0.67
UBE2E1-210ENST00000493707 NUDT7P0C024 238 aa10.88□□□□□ -0.67
UBE2E1-210ENST00000493707 ZNF608Q9ULD9 1512 aaPredicted RBP10.86□□□□□ -0.67
UBE2E1-210ENST00000493707 ABCC8Q09428 1581 aa10.85□□□□□ -0.67
UBE2E1-210ENST00000493707 CUX1P39880 1505 aa10.84□□□□□ -0.67
UBE2E1-210ENST00000493707 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
UBE2E1-210ENST00000493707 IFT140Q96RY7 1462 aa10.84□□□□□ -0.67
UBE2E1-210ENST00000493707 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
UBE2E1-210ENST00000493707 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
UBE2E1-210ENST00000493707 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
UBE2E1-210ENST00000493707 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
UBE2E1-210ENST00000493707 DSG2Q14126 1118 aa10.82□□□□□ -0.68
UBE2E1-210ENST00000493707 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
UBE2E1-210ENST00000493707 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
UBE2E1-210ENST00000493707 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
UBE2E1-210ENST00000493707 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
UBE2E1-210ENST00000493707 ZNF687Q8N1G0 1237 aa10.8□□□□□ -0.68
UBE2E1-210ENST00000493707 LHX6Q9UPM6 363 aa10.8□□□□□ -0.68
UBE2E1-210ENST00000493707 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
UBE2E1-210ENST00000493707 WDR97A6NE52 1622 aa10.77□□□□□ -0.68
UBE2E1-210ENST00000493707 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBE2E1-210ENST00000493707 SLC34A2O95436 690 aa10.77□□□□□ -0.69
UBE2E1-210ENST00000493707 FOXK1P85037 733 aa10.77□□□□□ -0.69
UBE2E1-210ENST00000493707 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
UBE2E1-210ENST00000493707 SOGA1O94964 1423 aa10.75□□□□□ -0.69
UBE2E1-210ENST00000493707 POTEEQ6S8J3 1075 aa10.75□□□□□ -0.69
UBE2E1-210ENST00000493707 BIVM-ERCC5R4GMW8 1640 aa10.74□□□□□ -0.69
UBE2E1-210ENST00000493707 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
UBE2E1-210ENST00000493707 CHD1O14646 1710 aa10.74□□□□□ -0.69
UBE2E1-210ENST00000493707 NCKAP5LQ9HCH0 1330 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms