RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 NCOA1Q15788 1441 aa9.11□□□□□ -0.95
EWSR1-220ENST00000493426 IGF1RP08069 1367 aa9.11□□□□□ -0.95
EWSR1-220ENST00000493426 CCDC18Q5T9S5 1454 aa9.1□□□□□ -0.95
EWSR1-220ENST00000493426 EIF4G2P78344 907 aaKnown RBP eCLIP9.1□□□□□ -0.95
EWSR1-220ENST00000493426 IRX6P78412 446 aaPredicted RBP9.1□□□□□ -0.95
EWSR1-220ENST00000493426 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
EWSR1-220ENST00000493426 SPINK5Q9NQ38 1064 aaPredicted RBP9.1□□□□□ -0.95
EWSR1-220ENST00000493426 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
EWSR1-220ENST00000493426 TRHP20396 242 aaPredicted RBP9.09□□□□□ -0.95
EWSR1-220ENST00000493426 NBR1Q14596 966 aa9.09□□□□□ -0.95
EWSR1-220ENST00000493426 CCDC7Q96M83 1385 aa9.09□□□□□ -0.95
EWSR1-220ENST00000493426 HSPA5P11021 654 aaKnown RBP9.08□□□□□ -0.96
EWSR1-220ENST00000493426 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
EWSR1-220ENST00000493426 AKNAQ7Z591 1439 aa9.07□□□□□ -0.96
EWSR1-220ENST00000493426 CASKIN1Q8WXD9 1431 aa9.07□□□□□ -0.96
EWSR1-220ENST00000493426 ABCA5Q8WWZ7 1642 aa9.07□□□□□ -0.96
EWSR1-220ENST00000493426 RANGAP1P46060 587 aaPredicted RBP9.07□□□□□ -0.96
EWSR1-220ENST00000493426 IL27Q8NEV9 243 aa9.07□□□□□ -0.96
EWSR1-220ENST00000493426 HIRIP3Q9BW71 556 aaPredicted RBP9.07□□□□□ -0.96
EWSR1-220ENST00000493426 DNMBPQ6XZF7 1577 aa9.07□□□□□ -0.96
EWSR1-220ENST00000493426 NAIPQ13075 1403 aa9.06□□□□□ -0.96
EWSR1-220ENST00000493426 FAM50AQ14320 339 aaKnown RBP9.06□□□□□ -0.96
EWSR1-220ENST00000493426 CCDC184Q52MB2 194 aa9.06□□□□□ -0.96
EWSR1-220ENST00000493426 ARID4BQ4LE39 1312 aaPredicted RBP9.05□□□□□ -0.96
EWSR1-220ENST00000493426 FMN1Q68DA7 1419 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 FGD5Q6ZNL6 1462 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 CARMIL1Q5VZK9 1371 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 MRS2Q9HD23 443 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 PTPN23Q9H3S7 1636 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
EWSR1-220ENST00000493426 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
EWSR1-220ENST00000493426 BACH2Q9BYV9 841 aa9.04□□□□□ -0.96
EWSR1-220ENST00000493426 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
EWSR1-220ENST00000493426 EFCAB5A4FU69 1503 aa9.04□□□□□ -0.96
EWSR1-220ENST00000493426 URB2Q14146 1524 aaKnown RBP9.04□□□□□ -0.96
EWSR1-220ENST00000493426 GSE1Q14687 1217 aa9.02□□□□□ -0.97
EWSR1-220ENST00000493426 INSRP06213 1382 aa9.01□□□□□ -0.97
EWSR1-220ENST00000493426 NEFMP07197 916 aa9.01□□□□□ -0.97
EWSR1-220ENST00000493426 PDE4AP27815 886 aa9.01□□□□□ -0.97
EWSR1-220ENST00000493426 PTPRKQ15262 1439 aa9.01□□□□□ -0.97
EWSR1-220ENST00000493426 FAM43AQ8N2R8 423 aa9.01□□□□□ -0.97
EWSR1-220ENST00000493426 CUL7Q14999 1698 aa9□□□□□ -0.97
EWSR1-220ENST00000493426 TOPBP1Q92547 1522 aa9□□□□□ -0.97
EWSR1-220ENST00000493426 KTN1Q86UP2 1357 aaKnown RBP9□□□□□ -0.97
EWSR1-220ENST00000493426 MIA2Q96PC5 1412 aa9□□□□□ -0.97
EWSR1-220ENST00000493426 PDE3BQ13370 1112 aa9□□□□□ -0.97
EWSR1-220ENST00000493426 FAM9BQ8IZU0 186 aa8.99□□□□□ -0.97
EWSR1-220ENST00000493426 PCF11O94913 1555 aaKnown RBP8.99□□□□□ -0.97
EWSR1-220ENST00000493426 LRPPRCP42704 1394 aaKnown RBP8.99□□□□□ -0.97
EWSR1-220ENST00000493426 DHX29Q7Z478 1369 aaKnown RBP8.99□□□□□ -0.97
EWSR1-220ENST00000493426 DENND4BO75064 1496 aaPredicted RBP8.98□□□□□ -0.97
EWSR1-220ENST00000493426 TCOF1Q13428 1488 aaKnown RBP8.98□□□□□ -0.97
EWSR1-220ENST00000493426 PNISRQ8TF01 805 aaKnown RBP8.98□□□□□ -0.97
EWSR1-220ENST00000493426 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
EWSR1-220ENST00000493426 ATF5Q9Y2D1 282 aaPredicted RBP8.97□□□□□ -0.97
EWSR1-220ENST00000493426 HECW1Q76N89 1606 aa8.97□□□□□ -0.97
EWSR1-220ENST00000493426 MYOM3Q5VTT5 1437 aa8.97□□□□□ -0.97
EWSR1-220ENST00000493426 IFT140Q96RY7 1462 aa8.96□□□□□ -0.97
EWSR1-220ENST00000493426 DSG3P32926 999 aa8.96□□□□□ -0.98
EWSR1-220ENST00000493426 POLR1AO95602 1720 aaPredicted RBP8.96□□□□□ -0.98
EWSR1-220ENST00000493426 ROCK2O75116 1388 aaKnown RBP8.96□□□□□ -0.98
EWSR1-220ENST00000493426 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
EWSR1-220ENST00000493426 KIF7Q2M1P5 1343 aa8.95□□□□□ -0.98
EWSR1-220ENST00000493426 RPRD2Q5VT52 1461 aaKnown RBP8.95□□□□□ -0.98
EWSR1-220ENST00000493426 ZMYM4Q5VZL5 1548 aa8.95□□□□□ -0.98
EWSR1-220ENST00000493426 RRP1P56182 461 aaKnown RBP8.94□□□□□ -0.98
EWSR1-220ENST00000493426 L3MBTL2Q969R5 705 aa8.94□□□□□ -0.98
EWSR1-220ENST00000493426 ANKRD30BQ9BXX2 1392 aa8.94□□□□□ -0.98
EWSR1-220ENST00000493426 NFKBIBQ15653 356 aa8.93□□□□□ -0.98
EWSR1-220ENST00000493426 MPHOSPH9Q99550 1183 aa8.93□□□□□ -0.98
EWSR1-220ENST00000493426 BRD4O60885 1362 aaPredicted RBP8.93□□□□□ -0.98
EWSR1-220ENST00000493426 TARBP1Q13395 1621 aaKnown RBP8.93□□□□□ -0.98
EWSR1-220ENST00000493426 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
EWSR1-220ENST00000493426 TEX14Q8IWB6 1497 aa8.92□□□□□ -0.98
EWSR1-220ENST00000493426 ROCK1Q13464 1354 aa8.92□□□□□ -0.98
EWSR1-220ENST00000493426 POLA2Q14181 598 aa8.92□□□□□ -0.98
EWSR1-220ENST00000493426 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
EWSR1-220ENST00000493426 ABCB7O75027 752 aa8.91□□□□□ -0.98
EWSR1-220ENST00000493426 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
EWSR1-220ENST00000493426 RALBP1Q15311 655 aa8.9□□□□□ -0.98
EWSR1-220ENST00000493426 NBPF8Q3BBV2 869 aa8.9□□□□□ -0.98
EWSR1-220ENST00000493426 GLIPR1L2Q4G1C9 344 aa8.9□□□□□ -0.98
EWSR1-220ENST00000493426 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
EWSR1-220ENST00000493426 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.99
EWSR1-220ENST00000493426 UGGT2Q9NYU1 1516 aa8.9□□□□□ -0.99
EWSR1-220ENST00000493426 MTUS2Q5JR59 1369 aa8.89□□□□□ -0.99
EWSR1-220ENST00000493426 FRAT1Q92837 279 aaPredicted RBP8.89□□□□□ -0.99
EWSR1-220ENST00000493426 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.89□□□□□ -0.99
EWSR1-220ENST00000493426 RCAN3Q9UKA8 241 aa8.89□□□□□ -0.99
EWSR1-220ENST00000493426 ZBTB12Q9Y330 459 aaPredicted RBP8.89□□□□□ -0.99
EWSR1-220ENST00000493426 LAS1LQ9Y4W2 734 aaKnown RBP8.89□□□□□ -0.99
EWSR1-220ENST00000493426 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
EWSR1-220ENST00000493426 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
EWSR1-220ENST00000493426 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
EWSR1-220ENST00000493426 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
EWSR1-220ENST00000493426 CTTNBP2Q8WZ74 1663 aa8.88□□□□□ -0.99
EWSR1-220ENST00000493426 EXOC6Q8TAG9 804 aa8.88□□□□□ -0.99
EWSR1-220ENST00000493426 FHOD3Q2V2M9 1422 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms