RNA–Protein interactions for RNA: ENST00000493403.1

ARPC1B-221, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-221ENST00000493403 HSPA2P54652 639 aa27.59■■■□□ 2.01
ARPC1B-221ENST00000493403 C9orf84Q5VXU9 1444 aa27.58■■■□□ 2.01
ARPC1B-221ENST00000493403 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
ARPC1B-221ENST00000493403 CDK13Q14004 1512 aaKnown RBP27.57■■■□□ 2
ARPC1B-221ENST00000493403 ARHGEF12Q9NZN5 1544 aa27.57■■■□□ 2
ARPC1B-221ENST00000493403 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
ARPC1B-221ENST00000493403 CERKQ8TCT0 537 aa27.55■■■□□ 2
ARPC1B-221ENST00000493403 MYO5CQ9NQX4 1742 aa27.54■■■□□ 2
ARPC1B-221ENST00000493403 ZNF518AQ6AHZ1 1483 aa27.52■■■□□ 2
ARPC1B-221ENST00000493403 MLECQ14165 292 aa27.52■■■□□ 2
ARPC1B-221ENST00000493403 PREX1Q8TCU6 1659 aa27.52■■■□□ 2
ARPC1B-221ENST00000493403 PLPPR3Q6T4P5 718 aa27.51■■□□□ 1.99
ARPC1B-221ENST00000493403 DMRT2Q9Y5R5 561 aa27.51■■□□□ 1.99
ARPC1B-221ENST00000493403 KIF14Q15058 1648 aa27.48■■□□□ 1.99
ARPC1B-221ENST00000493403 CLIP1P30622 1438 aa27.46■■□□□ 1.99
ARPC1B-221ENST00000493403 KDM5CP41229 1560 aa27.44■■□□□ 1.98
ARPC1B-221ENST00000493403 TROQ12816 1431 aaPredicted RBP27.43■■□□□ 1.98
ARPC1B-221ENST00000493403 REREQ9P2R6 1566 aa27.43■■□□□ 1.98
ARPC1B-221ENST00000493403 ATP1B4Q9UN42 357 aaPredicted RBP27.42■■□□□ 1.98
ARPC1B-221ENST00000493403 SETD1BQ9UPS6 1966 aaKnown RBP27.42■■□□□ 1.98
ARPC1B-221ENST00000493403 ARHGAP5Q13017 1502 aa27.41■■□□□ 1.98
ARPC1B-221ENST00000493403 UHRF1BP1Q6BDS2 1440 aa27.41■■□□□ 1.98
ARPC1B-221ENST00000493403 UBTFP17480 764 aaKnown RBP27.4■■□□□ 1.98
ARPC1B-221ENST00000493403 ARHGAP35Q9NRY4 1499 aa27.38■■□□□ 1.97
ARPC1B-221ENST00000493403 MLH3Q9UHC1 1453 aa27.35■■□□□ 1.97
ARPC1B-221ENST00000493403 AFAP1Q8N556 730 aa27.33■■□□□ 1.97
ARPC1B-221ENST00000493403 MYT1LQ9UL68 1186 aa27.33■■□□□ 1.97
ARPC1B-221ENST00000493403 DIP2CQ9Y2E4 1556 aa27.32■■□□□ 1.96
ARPC1B-221ENST00000493403 AGLP35573 1532 aa27.31■■□□□ 1.96
ARPC1B-221ENST00000493403 CEBPAP49715 358 aaPredicted RBP27.31■■□□□ 1.96
ARPC1B-221ENST00000493403 ESF1Q9H501 851 aaKnown RBP27.31■■□□□ 1.96
ARPC1B-221ENST00000493403 STRCQ7RTU9 1775 aa27.3■■□□□ 1.96
ARPC1B-221ENST00000493403 PTPRTO14522 1441 aa27.29■■□□□ 1.96
ARPC1B-221ENST00000493403 CCDC18Q5T9S5 1454 aa27.27■■□□□ 1.96
ARPC1B-221ENST00000493403 CNTLNQ9NXG0 1405 aa27.27■■□□□ 1.96
ARPC1B-221ENST00000493403 CDC42BPBQ9Y5S2 1711 aa27.24■■□□□ 1.95
ARPC1B-221ENST00000493403 PREX2Q70Z35 1606 aa27.24■■□□□ 1.95
ARPC1B-221ENST00000493403 ABCC1P33527 1531 aa27.24■■□□□ 1.95
ARPC1B-221ENST00000493403 TRAPPC8Q9Y2L5 1435 aa27.24■■□□□ 1.95
ARPC1B-221ENST00000493403 ABCA6Q8N139 1617 aa27.23■■□□□ 1.95
ARPC1B-221ENST00000493403 C3P01024 1663 aa27.23■■□□□ 1.95
ARPC1B-221ENST00000493403 IQSEC2Q5JU85 1478 aa27.2■■□□□ 1.95
ARPC1B-221ENST00000493403 ITSN2Q9NZM3 1697 aa27.18■■□□□ 1.94
ARPC1B-221ENST00000493403 CASKIN1Q8WXD9 1431 aa27.18■■□□□ 1.94
ARPC1B-221ENST00000493403 LRRIQ1Q96JM4 1722 aa27.18■■□□□ 1.94
ARPC1B-221ENST00000493403 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
ARPC1B-221ENST00000493403 NPATQ14207 1427 aa27.15■■□□□ 1.94
ARPC1B-221ENST00000493403 KIDINS220Q9ULH0 1771 aa27.12■■□□□ 1.93
ARPC1B-221ENST00000493403 MROH2AA6NES4 1674 aa27.12■■□□□ 1.93
ARPC1B-221ENST00000493403 NCOA1Q15788 1441 aa27.11■■□□□ 1.93
ARPC1B-221ENST00000493403 EHMT2Q96KQ7 1210 aa27.11■■□□□ 1.93
ARPC1B-221ENST00000493403 CDC42BPAQ5VT25 1732 aa27.08■■□□□ 1.93
ARPC1B-221ENST00000493403 FYCO1Q9BQS8 1478 aa27.07■■□□□ 1.92
ARPC1B-221ENST00000493403 SOCS7O14512 581 aa27.07■■□□□ 1.92
ARPC1B-221ENST00000493403 LTBP4Q8N2S1 1624 aa27.07■■□□□ 1.92
ARPC1B-221ENST00000493403 SAMD9LQ8IVG5 1584 aa27.05■■□□□ 1.92
ARPC1B-221ENST00000493403 PLEKHH2Q8IVE3 1493 aa27.04■■□□□ 1.92
ARPC1B-221ENST00000493403 KIAA1107Q9UPP5 1409 aa27.02■■□□□ 1.92
ARPC1B-221ENST00000493403 SPAG9O60271 1321 aaKnown RBP27.02■■□□□ 1.92
ARPC1B-221ENST00000493403 ZMYM3Q14202 1370 aa27.01■■□□□ 1.91
ARPC1B-221ENST00000493403 SPATA31D1Q6ZQQ2 1576 aa27.01■■□□□ 1.91
ARPC1B-221ENST00000493403 CAMSAP1Q5T5Y3 1602 aa27■■□□□ 1.91
ARPC1B-221ENST00000493403 PPP6R1Q9UPN7 881 aa26.98■■□□□ 1.91
ARPC1B-221ENST00000493403 SYCP2Q9BX26 1530 aa26.98■■□□□ 1.91
ARPC1B-221ENST00000493403 PLA2R1Q13018 1463 aa26.98■■□□□ 1.91
ARPC1B-221ENST00000493403 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
ARPC1B-221ENST00000493403 PKD2Q13563 968 aa26.97■■□□□ 1.91
ARPC1B-221ENST00000493403 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
ARPC1B-221ENST00000493403 ILDR2Q71H61 639 aa26.97■■□□□ 1.91
ARPC1B-221ENST00000493403 ZNF777Q9ULD5 760 aaPredicted RBP26.96■■□□□ 1.91
ARPC1B-221ENST00000493403 ATP7AQ04656 1500 aa26.95■■□□□ 1.91
ARPC1B-221ENST00000493403 PLXNC1O60486 1568 aa26.94■■□□□ 1.9
ARPC1B-221ENST00000493403 ZNF142P52746 1687 aaPredicted RBP26.94■■□□□ 1.9
ARPC1B-221ENST00000493403 A2MP01023 1474 aa26.93■■□□□ 1.9
ARPC1B-221ENST00000493403 SUPT6HQ7KZ85 1726 aaKnown RBP26.92■■□□□ 1.9
ARPC1B-221ENST00000493403 INO80Q9ULG1 1556 aaPredicted RBP26.92■■□□□ 1.9
ARPC1B-221ENST00000493403 CFDP1Q9UEE9 299 aaPredicted RBP26.91■■□□□ 1.9
ARPC1B-221ENST00000493403 HNRNPMP52272 730 aaKnown RBP eCLIP26.9■■□□□ 1.9
ARPC1B-221ENST00000493403 MYO3AQ8NEV4 1616 aa26.89■■□□□ 1.9
ARPC1B-221ENST00000493403 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
ARPC1B-221ENST00000493403 CLTCQ00610 1675 aaKnown RBP26.88■■□□□ 1.89
ARPC1B-221ENST00000493403 CEP170BQ9Y4F5 1589 aaPredicted RBP26.88■■□□□ 1.89
ARPC1B-221ENST00000493403 PTPRKQ15262 1439 aa26.87■■□□□ 1.89
ARPC1B-221ENST00000493403 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
ARPC1B-221ENST00000493403 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
ARPC1B-221ENST00000493403 NCKAP5LQ9HCH0 1330 aa26.84■■□□□ 1.89
ARPC1B-221ENST00000493403 MTUS2Q5JR59 1369 aa26.82■■□□□ 1.88
ARPC1B-221ENST00000493403 GGT6Q6P531 493 aa26.81■■□□□ 1.88
ARPC1B-221ENST00000493403 ZNF335Q9H4Z2 1342 aaPredicted RBP26.81■■□□□ 1.88
ARPC1B-221ENST00000493403 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
ARPC1B-221ENST00000493403 RTEL1-TNFRSF6BF6WH68 1400 aa26.8■■□□□ 1.88
ARPC1B-221ENST00000493403 FAM135AQ9P2D6 1515 aa26.78■■□□□ 1.88
ARPC1B-221ENST00000493403 A2ML1A8K2U0 1454 aa26.77■■□□□ 1.88
ARPC1B-221ENST00000493403 EHBP1L1Q8N3D4 1523 aa26.72■■□□□ 1.87
ARPC1B-221ENST00000493403 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
ARPC1B-221ENST00000493403 MBD5Q9P267 1494 aa26.71■■□□□ 1.87
ARPC1B-221ENST00000493403 DNMT1P26358 1616 aaKnown RBP26.7■■□□□ 1.86
ARPC1B-221ENST00000493403 RSPH4AQ5TD94 716 aa26.7■■□□□ 1.86
ARPC1B-221ENST00000493403 CPS1P31327 1500 aa26.7■■□□□ 1.86
ARPC1B-221ENST00000493403 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms