RNA–Protein interactions for RNA: ENST00000492966.5

TMBIM1-222, Transcript of transmembrane BAX inhibitor motif containing 1, human

TSL 4

Gene TMBIM1, Length 400 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMBIM1-222	ENST00000492966	DENND4B	O75064	1496 aa	Predicted RBP	13.51	□□□□□ -0.25
TMBIM1-222	ENST00000492966	FHOD3	Q2V2M9	1422 aa		13.5	□□□□□ -0.25
TMBIM1-222	ENST00000492966	KIF27	Q86VH2	1401 aa		13.5	□□□□□ -0.25
TMBIM1-222	ENST00000492966	PIP4K2B	P78356	416 aa		13.5	□□□□□ -0.25
TMBIM1-222	ENST00000492966	RGS17	Q9UGC6	210 aa	Predicted RBP	13.5	□□□□□ -0.25
TMBIM1-222	ENST00000492966	HECW1	Q76N89	1606 aa		13.5	□□□□□ -0.25
TMBIM1-222	ENST00000492966	CAMSAP1	Q5T5Y3	1602 aa		13.48	□□□□□ -0.25
TMBIM1-222	ENST00000492966	ALK	Q9UM73	1620 aa		13.46	□□□□□ -0.25
TMBIM1-222	ENST00000492966	ATP10B	O94823	1461 aa		13.46	□□□□□ -0.25
TMBIM1-222	ENST00000492966	CTTNBP2	Q8WZ74	1663 aa		13.45	□□□□□ -0.26
TMBIM1-222	ENST00000492966	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.44	□□□□□ -0.26
TMBIM1-222	ENST00000492966	CFAP74	Q9C0B2	1584 aa		13.43	□□□□□ -0.26
TMBIM1-222	ENST00000492966	SENP3	Q9H4L4	574 aa	Predicted RBP	13.4	□□□□□ -0.26
TMBIM1-222	ENST00000492966	NCKAP5L	Q9HCH0	1330 aa		13.39	□□□□□ -0.27
TMBIM1-222	ENST00000492966	MAGI2	Q86UL8	1455 aa		13.39	□□□□□ -0.27
TMBIM1-222	ENST00000492966	C9orf84	Q5VXU9	1444 aa		13.39	□□□□□ -0.27
TMBIM1-222	ENST00000492966	ATP10A	O60312	1499 aa		13.36	□□□□□ -0.27
TMBIM1-222	ENST00000492966	POTEA	Q6S8J7	498 aa		13.36	□□□□□ -0.27
TMBIM1-222	ENST00000492966	ZNF142	P52746	1687 aa	Predicted RBP	13.34	□□□□□ -0.27
TMBIM1-222	ENST00000492966	TRAPPC8	Q9Y2L5	1435 aa		13.33	□□□□□ -0.28
TMBIM1-222	ENST00000492966	GOLGA3	Q08378	1498 aa		13.32	□□□□□ -0.28
TMBIM1-222	ENST00000492966	TOM1	O60784	492 aa		13.32	□□□□□ -0.28
TMBIM1-222	ENST00000492966	MYO3A	Q8NEV4	1616 aa		13.31	□□□□□ -0.28
TMBIM1-222	ENST00000492966	TCOF1	Q13428	1488 aa	Known RBP	13.3	□□□□□ -0.28
TMBIM1-222	ENST00000492966	RAPGEF2	Q9Y4G8	1499 aa		13.3	□□□□□ -0.28
TMBIM1-222	ENST00000492966	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
TMBIM1-222	ENST00000492966	RAPGEF6	Q8TEU7	1601 aa		13.29	□□□□□ -0.28
TMBIM1-222	ENST00000492966	DIP2C	Q9Y2E4	1556 aa		13.28	□□□□□ -0.28
TMBIM1-222	ENST00000492966	CPS1	P31327	1500 aa		13.28	□□□□□ -0.28
TMBIM1-222	ENST00000492966	POLR1A	O95602	1720 aa	Predicted RBP	13.27	□□□□□ -0.28
TMBIM1-222	ENST00000492966	PLA2R1	Q13018	1463 aa		13.27	□□□□□ -0.29
TMBIM1-222	ENST00000492966	ABCA6	Q8N139	1617 aa		13.27	□□□□□ -0.29
TMBIM1-222	ENST00000492966	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.25	□□□□□ -0.29
TMBIM1-222	ENST00000492966	SCAPER	Q9BY12	1400 aa		13.25	□□□□□ -0.29
TMBIM1-222	ENST00000492966	STRCP1	A6NGW2	1772 aa		13.24	□□□□□ -0.29
TMBIM1-222	ENST00000492966	MROH2A	A6NES4	1674 aa		13.24	□□□□□ -0.29
TMBIM1-222	ENST00000492966	NEURL4	Q96JN8	1562 aa		13.24	□□□□□ -0.29
TMBIM1-222	ENST00000492966	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
TMBIM1-222	ENST00000492966	PPP6R1	Q9UPN7	881 aa		13.23	□□□□□ -0.29
TMBIM1-222	ENST00000492966	RERE	Q9P2R6	1566 aa		13.22	□□□□□ -0.29
TMBIM1-222	ENST00000492966	SHANK2	Q9UPX8	1470 aa		13.22	□□□□□ -0.29
TMBIM1-222	ENST00000492966	PTPRK	Q15262	1439 aa		13.22	□□□□□ -0.29
TMBIM1-222	ENST00000492966	VWDE	Q8N2E2	1590 aa		13.21	□□□□□ -0.29
TMBIM1-222	ENST00000492966	NUP153	P49790	1475 aa	Known RBP	13.21	□□□□□ -0.3
TMBIM1-222	ENST00000492966	AGL	P35573	1532 aa		13.2	□□□□□ -0.3
TMBIM1-222	ENST00000492966	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.2	□□□□□ -0.3
TMBIM1-222	ENST00000492966	PKD2	Q13563	968 aa		13.2	□□□□□ -0.3
TMBIM1-222	ENST00000492966	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.2	□□□□□ -0.3
TMBIM1-222	ENST00000492966	RNF17	Q9BXT8	1623 aa	Known RBP	13.2	□□□□□ -0.3
TMBIM1-222	ENST00000492966	KDM5C	P41229	1560 aa		13.2	□□□□□ -0.3
TMBIM1-222	ENST00000492966	P3H3	Q8IVL6	736 aa		13.19	□□□□□ -0.3
TMBIM1-222	ENST00000492966	NPAT	Q14207	1427 aa		13.19	□□□□□ -0.3
TMBIM1-222	ENST00000492966	CLTC	Q00610	1675 aa	Known RBP	13.17	□□□□□ -0.3
TMBIM1-222	ENST00000492966	MYO5C	Q9NQX4	1742 aa		13.16	□□□□□ -0.3
TMBIM1-222	ENST00000492966	DNMT1	P26358	1616 aa	Known RBP	13.14	□□□□□ -0.31
TMBIM1-222	ENST00000492966	CNTLN	Q9NXG0	1405 aa		13.13	□□□□□ -0.31
TMBIM1-222	ENST00000492966	SAMD9	Q5K651	1589 aa		13.13	□□□□□ -0.31
TMBIM1-222	ENST00000492966	ESF1	Q9H501	851 aa	Known RBP	13.13	□□□□□ -0.31
TMBIM1-222	ENST00000492966	XIRP1	Q702N8	1843 aa	Known RBP	13.13	□□□□□ -0.31
TMBIM1-222	ENST00000492966	ZNF518A	Q6AHZ1	1483 aa		13.12	□□□□□ -0.31
TMBIM1-222	ENST00000492966	LRRC7	Q96NW7	1537 aa		13.11	□□□□□ -0.31
TMBIM1-222	ENST00000492966	PLCH2	O75038	1416 aa		13.1	□□□□□ -0.31
TMBIM1-222	ENST00000492966	SYNM	O15061	1565 aa		13.09	□□□□□ -0.31
TMBIM1-222	ENST00000492966	KIDINS220	Q9ULH0	1771 aa		13.09	□□□□□ -0.31
TMBIM1-222	ENST00000492966	SUPT5H	O00267	1087 aa	Known RBP	13.08	□□□□□ -0.32
TMBIM1-222	ENST00000492966	AFAP1	Q8N556	730 aa		13.08	□□□□□ -0.32
TMBIM1-222	ENST00000492966	ZMYM3	Q14202	1370 aa		13.07	□□□□□ -0.32
TMBIM1-222	ENST00000492966	TRIM52	Q96A61	297 aa		13.06	□□□□□ -0.32
TMBIM1-222	ENST00000492966	SETBP1	Q9Y6X0	1596 aa		13.06	□□□□□ -0.32
TMBIM1-222	ENST00000492966	ITSN2	Q9NZM3	1697 aa		13.05	□□□□□ -0.32
TMBIM1-222	ENST00000492966	PLEKHD1	A6NEE1	506 aa		13.05	□□□□□ -0.32
TMBIM1-222	ENST00000492966	MYT1L	Q9UL68	1186 aa		13.05	□□□□□ -0.32
TMBIM1-222	ENST00000492966	A2ML1	A8K2U0	1454 aa		13.04	□□□□□ -0.32
TMBIM1-222	ENST00000492966	IQGAP1	P46940	1657 aa		13.04	□□□□□ -0.32
TMBIM1-222	ENST00000492966	CDK13	Q14004	1512 aa	Known RBP	13.03	□□□□□ -0.32
TMBIM1-222	ENST00000492966	KIF14	Q15058	1648 aa		13.03	□□□□□ -0.32
TMBIM1-222	ENST00000492966	MLH3	Q9UHC1	1453 aa		13.03	□□□□□ -0.32
TMBIM1-222	ENST00000492966	ROBO1	Q9Y6N7	1651 aa		13.02	□□□□□ -0.32
TMBIM1-222	ENST00000492966	CDC42BPB	Q9Y5S2	1711 aa		13.01	□□□□□ -0.33
TMBIM1-222	ENST00000492966	ARHGAP5	Q13017	1502 aa		12.99	□□□□□ -0.33
TMBIM1-222	ENST00000492966	DEPDC5	O75140	1603 aa		12.99	□□□□□ -0.33
TMBIM1-222	ENST00000492966	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.98	□□□□□ -0.33
TMBIM1-222	ENST00000492966	ZC3H13	Q5T200	1668 aa	Known RBP	12.97	□□□□□ -0.33
TMBIM1-222	ENST00000492966	EFCAB2	Q5VUJ9	269 aa		12.97	□□□□□ -0.33
TMBIM1-222	ENST00000492966	LRP6	O75581	1613 aa		12.97	□□□□□ -0.33
TMBIM1-222	ENST00000492966	EP400	Q96L91	3159 aa		12.97	□□□□□ -0.33
TMBIM1-222	ENST00000492966	NPHP4	O75161	1426 aa	Predicted RBP	12.96	□□□□□ -0.33
TMBIM1-222	ENST00000492966	ABCC1	P33527	1531 aa		12.96	□□□□□ -0.33
TMBIM1-222	ENST00000492966	PHLPP1	O60346	1717 aa		12.96	□□□□□ -0.34
TMBIM1-222	ENST00000492966	MED14	O60244	1454 aa		12.95	□□□□□ -0.34
TMBIM1-222	ENST00000492966	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
TMBIM1-222	ENST00000492966	PRX	Q9BXM0	1461 aa		12.93	□□□□□ -0.34
TMBIM1-222	ENST00000492966	FAM135B	Q49AJ0	1406 aa		12.93	□□□□□ -0.34
TMBIM1-222	ENST00000492966	PLXNC1	O60486	1568 aa		12.91	□□□□□ -0.34
TMBIM1-222	ENST00000492966	PREX2	Q70Z35	1606 aa		12.89	□□□□□ -0.35
TMBIM1-222	ENST00000492966	COL16A1	Q07092	1604 aa	Predicted RBP	12.88	□□□□□ -0.35
TMBIM1-222	ENST00000492966	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.88	□□□□□ -0.35
TMBIM1-222	ENST00000492966	SAMD9L	Q8IVG5	1584 aa		12.88	□□□□□ -0.35
TMBIM1-222	ENST00000492966	ANKLE2	Q86XL3	938 aa		12.87	□□□□□ -0.35
TMBIM1-222	ENST00000492966	RGS12	O14924	1447 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms