RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 NCOA1Q15788 1441 aa20.45■□□□□ 0.86
CACNA1C-228ENST00000492150 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
CACNA1C-228ENST00000492150 HECW1Q76N89 1606 aa20.43■□□□□ 0.86
CACNA1C-228ENST00000492150 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
CACNA1C-228ENST00000492150 ATP10AO60312 1499 aa20.38■□□□□ 0.85
CACNA1C-228ENST00000492150 C3P01024 1663 aa20.37■□□□□ 0.85
CACNA1C-228ENST00000492150 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
CACNA1C-228ENST00000492150 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
CACNA1C-228ENST00000492150 HSPA1LP34931 641 aa20.35■□□□□ 0.85
CACNA1C-228ENST00000492150 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
CACNA1C-228ENST00000492150 ZNF335Q9H4Z2 1342 aaPredicted RBP20.31■□□□□ 0.84
CACNA1C-228ENST00000492150 TRAPPC8Q9Y2L5 1435 aa20.31■□□□□ 0.84
CACNA1C-228ENST00000492150 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
CACNA1C-228ENST00000492150 CAMSAP1Q5T5Y3 1602 aa20.29■□□□□ 0.84
CACNA1C-228ENST00000492150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.27■□□□□ 0.83
CACNA1C-228ENST00000492150 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
CACNA1C-228ENST00000492150 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
CACNA1C-228ENST00000492150 PLA2R1Q13018 1463 aa20.21■□□□□ 0.83
CACNA1C-228ENST00000492150 NUP153P49790 1475 aaKnown RBP20.2■□□□□ 0.82
CACNA1C-228ENST00000492150 TOM1O60784 492 aa20.2■□□□□ 0.82
CACNA1C-228ENST00000492150 AGLP35573 1532 aa20.19■□□□□ 0.82
CACNA1C-228ENST00000492150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
CACNA1C-228ENST00000492150 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
CACNA1C-228ENST00000492150 PKD2Q13563 968 aa20.17■□□□□ 0.82
CACNA1C-228ENST00000492150 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
CACNA1C-228ENST00000492150 NPATQ14207 1427 aa20.17■□□□□ 0.82
CACNA1C-228ENST00000492150 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
CACNA1C-228ENST00000492150 PIP4K2BP78356 416 aa20.16■□□□□ 0.82
CACNA1C-228ENST00000492150 ZNF142P52746 1687 aaPredicted RBP20.16■□□□□ 0.82
CACNA1C-228ENST00000492150 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
CACNA1C-228ENST00000492150 CNTLNQ9NXG0 1405 aa20.15■□□□□ 0.82
CACNA1C-228ENST00000492150 SAMD9Q5K651 1589 aa20.15■□□□□ 0.82
CACNA1C-228ENST00000492150 KDM5CP41229 1560 aa20.14■□□□□ 0.81
CACNA1C-228ENST00000492150 CPS1P31327 1500 aa20.14■□□□□ 0.81
CACNA1C-228ENST00000492150 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
CACNA1C-228ENST00000492150 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
CACNA1C-228ENST00000492150 PLCH2O75038 1416 aa20.12■□□□□ 0.81
CACNA1C-228ENST00000492150 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
CACNA1C-228ENST00000492150 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
CACNA1C-228ENST00000492150 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
CACNA1C-228ENST00000492150 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
CACNA1C-228ENST00000492150 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
CACNA1C-228ENST00000492150 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
CACNA1C-228ENST00000492150 P3H3Q8IVL6 736 aa20.08■□□□□ 0.81
CACNA1C-228ENST00000492150 PTPRKQ15262 1439 aa20.08■□□□□ 0.8
CACNA1C-228ENST00000492150 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
CACNA1C-228ENST00000492150 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
CACNA1C-228ENST00000492150 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
CACNA1C-228ENST00000492150 ABCA6Q8N139 1617 aa20.05■□□□□ 0.8
CACNA1C-228ENST00000492150 CEP170BQ9Y4F5 1589 aaPredicted RBP20.03■□□□□ 0.8
CACNA1C-228ENST00000492150 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
CACNA1C-228ENST00000492150 MLH3Q9UHC1 1453 aa20■□□□□ 0.79
CACNA1C-228ENST00000492150 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
CACNA1C-228ENST00000492150 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
CACNA1C-228ENST00000492150 POLR1AO95602 1720 aaPredicted RBP19.96■□□□□ 0.79
CACNA1C-228ENST00000492150 ZMYM3Q14202 1370 aa19.95■□□□□ 0.78
CACNA1C-228ENST00000492150 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
CACNA1C-228ENST00000492150 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
CACNA1C-228ENST00000492150 SETD1AO15047 1707 aaKnown RBP19.91■□□□□ 0.78
CACNA1C-228ENST00000492150 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
CACNA1C-228ENST00000492150 VWDEQ8N2E2 1590 aa19.9■□□□□ 0.78
CACNA1C-228ENST00000492150 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
CACNA1C-228ENST00000492150 DNMT1P26358 1616 aaKnown RBP19.87■□□□□ 0.77
CACNA1C-228ENST00000492150 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
CACNA1C-228ENST00000492150 KIDINS220Q9ULH0 1771 aa19.86■□□□□ 0.77
CACNA1C-228ENST00000492150 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
CACNA1C-228ENST00000492150 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
CACNA1C-228ENST00000492150 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
CACNA1C-228ENST00000492150 CDK13Q14004 1512 aaKnown RBP19.83■□□□□ 0.77
CACNA1C-228ENST00000492150 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
CACNA1C-228ENST00000492150 SYNMO15061 1565 aa19.82■□□□□ 0.76
CACNA1C-228ENST00000492150 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
CACNA1C-228ENST00000492150 ABCC1P33527 1531 aa19.78■□□□□ 0.76
CACNA1C-228ENST00000492150 KIF14Q15058 1648 aa19.78■□□□□ 0.76
CACNA1C-228ENST00000492150 LRRC7Q96NW7 1537 aa19.76■□□□□ 0.75
CACNA1C-228ENST00000492150 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
CACNA1C-228ENST00000492150 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
CACNA1C-228ENST00000492150 MED14O60244 1454 aa19.75■□□□□ 0.75
CACNA1C-228ENST00000492150 DEPDC5O75140 1603 aa19.75■□□□□ 0.75
CACNA1C-228ENST00000492150 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
CACNA1C-228ENST00000492150 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
CACNA1C-228ENST00000492150 SRCAPQ6ZRS2 3230 aa19.74■□□□□ 0.75
CACNA1C-228ENST00000492150 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
CACNA1C-228ENST00000492150 PLXNC1O60486 1568 aa19.71■□□□□ 0.75
CACNA1C-228ENST00000492150 PREX2Q70Z35 1606 aa19.69■□□□□ 0.74
CACNA1C-228ENST00000492150 IQGAP1P46940 1657 aa19.68■□□□□ 0.74
CACNA1C-228ENST00000492150 NPHP4O75161 1426 aaPredicted RBP19.68■□□□□ 0.74
CACNA1C-228ENST00000492150 ANKLE2Q86XL3 938 aa19.67■□□□□ 0.74
CACNA1C-228ENST00000492150 CDK11AQ9UQ88 783 aaPredicted RBP19.66■□□□□ 0.74
CACNA1C-228ENST00000492150 TROQ12816 1431 aaPredicted RBP19.66■□□□□ 0.74
CACNA1C-228ENST00000492150 EEA1Q15075 1411 aa19.66■□□□□ 0.74
CACNA1C-228ENST00000492150 FAM135BQ49AJ0 1406 aa19.66■□□□□ 0.74
CACNA1C-228ENST00000492150 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
CACNA1C-228ENST00000492150 CLIP1P30622 1438 aa19.62■□□□□ 0.73
CACNA1C-228ENST00000492150 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
CACNA1C-228ENST00000492150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNA1C-228ENST00000492150 A2MP01023 1474 aa19.59■□□□□ 0.73
CACNA1C-228ENST00000492150 TNRQ92752 1358 aa19.58■□□□□ 0.73
CACNA1C-228ENST00000492150 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
CACNA1C-228ENST00000492150 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms