RNA–Protein interactions for RNA: ENST00000491561.3

RN7SL346P-201, Transcript of RNA, 7SL, cytoplasmic 346, pseudogene, humanhuman

BASIC

Gene RN7SL346P, Length 294 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL346P-201ENST00000491561 MAGI2Q86UL8 1455 aa8.58□□□□□ -1.04
RN7SL346P-201ENST00000491561 ZNF335Q9H4Z2 1342 aaPredicted RBP8.57□□□□□ -1.04
RN7SL346P-201ENST00000491561 MLECQ14165 292 aa8.57□□□□□ -1.04
RN7SL346P-201ENST00000491561 HECW1Q76N89 1606 aa8.55□□□□□ -1.04
RN7SL346P-201ENST00000491561 ALKQ9UM73 1620 aa8.55□□□□□ -1.04
RN7SL346P-201ENST00000491561 PHF23Q9BUL5 403 aaPredicted RBP8.55□□□□□ -1.04
RN7SL346P-201ENST00000491561 C3P01024 1663 aa8.55□□□□□ -1.04
RN7SL346P-201ENST00000491561 CAMSAP1Q5T5Y3 1602 aa8.52□□□□□ -1.05
RN7SL346P-201ENST00000491561 C9orf84Q5VXU9 1444 aa8.52□□□□□ -1.05
RN7SL346P-201ENST00000491561 ATP10AO60312 1499 aa8.51□□□□□ -1.05
RN7SL346P-201ENST00000491561 TRAPPC8Q9Y2L5 1435 aa8.51□□□□□ -1.05
RN7SL346P-201ENST00000491561 CFAP74Q9C0B2 1584 aa8.5□□□□□ -1.05
RN7SL346P-201ENST00000491561 GOLGA3Q08378 1498 aa8.5□□□□□ -1.05
RN7SL346P-201ENST00000491561 TCOF1Q13428 1488 aaKnown RBP8.5□□□□□ -1.05
RN7SL346P-201ENST00000491561 RAPGEF2Q9Y4G8 1499 aa8.5□□□□□ -1.05
RN7SL346P-201ENST00000491561 PIP4K2BP78356 416 aa8.48□□□□□ -1.05
RN7SL346P-201ENST00000491561 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
RN7SL346P-201ENST00000491561 NCKAP5LQ9HCH0 1330 aa8.48□□□□□ -1.05
RN7SL346P-201ENST00000491561 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
RN7SL346P-201ENST00000491561 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
RN7SL346P-201ENST00000491561 TOM1O60784 492 aa8.47□□□□□ -1.05
RN7SL346P-201ENST00000491561 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
RN7SL346P-201ENST00000491561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.46□□□□□ -1.05
RN7SL346P-201ENST00000491561 REREQ9P2R6 1566 aa8.46□□□□□ -1.06
RN7SL346P-201ENST00000491561 SETD1AO15047 1707 aaKnown RBP8.45□□□□□ -1.06
RN7SL346P-201ENST00000491561 CPS1P31327 1500 aa8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 AGLP35573 1532 aa8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 ZNF142P52746 1687 aaPredicted RBP8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 PKD2Q13563 968 aa8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 SCAF1Q9H7N4 1312 aaKnown RBP8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 NPATQ14207 1427 aa8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 SCAPERQ9BY12 1400 aa8.44□□□□□ -1.06
RN7SL346P-201ENST00000491561 PTPRKQ15262 1439 aa8.42□□□□□ -1.06
RN7SL346P-201ENST00000491561 NUP153P49790 1475 aaKnown RBP8.42□□□□□ -1.06
RN7SL346P-201ENST00000491561 KDM5CP41229 1560 aa8.42□□□□□ -1.06
RN7SL346P-201ENST00000491561 RAPGEF6Q8TEU7 1601 aa8.42□□□□□ -1.06
RN7SL346P-201ENST00000491561 DIP2CQ9Y2E4 1556 aa8.41□□□□□ -1.06
RN7SL346P-201ENST00000491561 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
RN7SL346P-201ENST00000491561 SHANK2Q9UPX8 1470 aa8.4□□□□□ -1.06
RN7SL346P-201ENST00000491561 PPP6R1Q9UPN7 881 aa8.4□□□□□ -1.06
RN7SL346P-201ENST00000491561 MROH2AA6NES4 1674 aa8.4□□□□□ -1.07
RN7SL346P-201ENST00000491561 MYO3AQ8NEV4 1616 aa8.39□□□□□ -1.07
RN7SL346P-201ENST00000491561 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
RN7SL346P-201ENST00000491561 NEURL4Q96JN8 1562 aa8.39□□□□□ -1.07
RN7SL346P-201ENST00000491561 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
RN7SL346P-201ENST00000491561 PLCH2O75038 1416 aa8.38□□□□□ -1.07
RN7SL346P-201ENST00000491561 CNTLNQ9NXG0 1405 aa8.38□□□□□ -1.07
RN7SL346P-201ENST00000491561 ABCA6Q8N139 1617 aa8.37□□□□□ -1.07
RN7SL346P-201ENST00000491561 SUPT6HQ7KZ85 1726 aaKnown RBP8.37□□□□□ -1.07
RN7SL346P-201ENST00000491561 ZNF518AQ6AHZ1 1483 aa8.36□□□□□ -1.07
RN7SL346P-201ENST00000491561 ZMYM3Q14202 1370 aa8.35□□□□□ -1.07
RN7SL346P-201ENST00000491561 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
RN7SL346P-201ENST00000491561 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
RN7SL346P-201ENST00000491561 DNMT1P26358 1616 aaKnown RBP8.34□□□□□ -1.07
RN7SL346P-201ENST00000491561 PLEKHD1A6NEE1 506 aa8.34□□□□□ -1.07
RN7SL346P-201ENST00000491561 AFAP1Q8N556 730 aa8.34□□□□□ -1.07
RN7SL346P-201ENST00000491561 STRCP1A6NGW2 1772 aa8.34□□□□□ -1.07
RN7SL346P-201ENST00000491561 POLR1AO95602 1720 aaPredicted RBP8.34□□□□□ -1.07
RN7SL346P-201ENST00000491561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.33□□□□□ -1.08
RN7SL346P-201ENST00000491561 HNRNPUL2Q1KMD3 747 aaKnown RBP8.33□□□□□ -1.08
RN7SL346P-201ENST00000491561 P3H3Q8IVL6 736 aa8.33□□□□□ -1.08
RN7SL346P-201ENST00000491561 RNF17Q9BXT8 1623 aaKnown RBP8.32□□□□□ -1.08
RN7SL346P-201ENST00000491561 LRRC7Q96NW7 1537 aa8.32□□□□□ -1.08
RN7SL346P-201ENST00000491561 PRXQ9BXM0 1461 aa8.31□□□□□ -1.08
RN7SL346P-201ENST00000491561 SENP3Q9H4L4 574 aaPredicted RBP8.3□□□□□ -1.08
RN7SL346P-201ENST00000491561 ESF1Q9H501 851 aaKnown RBP8.3□□□□□ -1.08
RN7SL346P-201ENST00000491561 A2ML1A8K2U0 1454 aa8.3□□□□□ -1.08
RN7SL346P-201ENST00000491561 MED14O60244 1454 aa8.3□□□□□ -1.08
RN7SL346P-201ENST00000491561 KIDINS220Q9ULH0 1771 aa8.3□□□□□ -1.08
RN7SL346P-201ENST00000491561 MYO5CQ9NQX4 1742 aa8.29□□□□□ -1.08
RN7SL346P-201ENST00000491561 EFCAB2Q5VUJ9 269 aa8.29□□□□□ -1.08
RN7SL346P-201ENST00000491561 SYNMO15061 1565 aa8.28□□□□□ -1.08
RN7SL346P-201ENST00000491561 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
RN7SL346P-201ENST00000491561 FAM135BQ49AJ0 1406 aa8.28□□□□□ -1.08
RN7SL346P-201ENST00000491561 CLTCQ00610 1675 aaKnown RBP8.27□□□□□ -1.08
RN7SL346P-201ENST00000491561 SUPT5HO00267 1087 aaKnown RBP8.27□□□□□ -1.09
RN7SL346P-201ENST00000491561 DEPDC5O75140 1603 aa8.27□□□□□ -1.09
RN7SL346P-201ENST00000491561 XIRP1Q702N8 1843 aaKnown RBP8.26□□□□□ -1.09
RN7SL346P-201ENST00000491561 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
RN7SL346P-201ENST00000491561 NPHP4O75161 1426 aaPredicted RBP8.23□□□□□ -1.09
RN7SL346P-201ENST00000491561 CDK12Q9NYV4 1490 aaPredicted RBP8.23□□□□□ -1.09
RN7SL346P-201ENST00000491561 ABCC1P33527 1531 aa8.23□□□□□ -1.09
RN7SL346P-201ENST00000491561 CDC42BPBQ9Y5S2 1711 aa8.23□□□□□ -1.09
RN7SL346P-201ENST00000491561 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
RN7SL346P-201ENST00000491561 KIF14Q15058 1648 aa8.22□□□□□ -1.09
RN7SL346P-201ENST00000491561 IQGAP1P46940 1657 aa8.22□□□□□ -1.09
RN7SL346P-201ENST00000491561 SETBP1Q9Y6X0 1596 aa8.22□□□□□ -1.09
RN7SL346P-201ENST00000491561 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.09
RN7SL346P-201ENST00000491561 ITSN2Q9NZM3 1697 aa8.21□□□□□ -1.09
RN7SL346P-201ENST00000491561 ARHGAP5Q13017 1502 aa8.21□□□□□ -1.1
RN7SL346P-201ENST00000491561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.21□□□□□ -1.1
RN7SL346P-201ENST00000491561 ROBO1Q9Y6N7 1651 aa8.21□□□□□ -1.1
RN7SL346P-201ENST00000491561 ANKLE2Q86XL3 938 aa8.2□□□□□ -1.1
RN7SL346P-201ENST00000491561 LRP6O75581 1613 aa8.2□□□□□ -1.1
RN7SL346P-201ENST00000491561 EP400Q96L91 3159 aa8.2□□□□□ -1.1
RN7SL346P-201ENST00000491561 TRIM52Q96A61 297 aa8.19□□□□□ -1.1
RN7SL346P-201ENST00000491561 SAMD9LQ8IVG5 1584 aa8.18□□□□□ -1.1
RN7SL346P-201ENST00000491561 HRCP23327 699 aa8.18□□□□□ -1.1
RN7SL346P-201ENST00000491561 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
RN7SL346P-201ENST00000491561 JCADQ9P266 1359 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms