RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 SCAPERQ9BY12 1400 aa25.81■■□□□ 1.72
SCAMP3-208ENST00000490999 PLCH2O75038 1416 aa25.77■■□□□ 1.72
SCAMP3-208ENST00000490999 ARHGEF12Q9NZN5 1544 aa25.77■■□□□ 1.72
SCAMP3-208ENST00000490999 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
SCAMP3-208ENST00000490999 C9orf84Q5VXU9 1444 aa25.74■■□□□ 1.71
SCAMP3-208ENST00000490999 EHMT2Q96KQ7 1210 aa25.73■■□□□ 1.71
SCAMP3-208ENST00000490999 ATP10AO60312 1499 aa25.72■■□□□ 1.71
SCAMP3-208ENST00000490999 KIF14Q15058 1648 aa25.72■■□□□ 1.71
SCAMP3-208ENST00000490999 PREX1Q8TCU6 1659 aa25.71■■□□□ 1.71
SCAMP3-208ENST00000490999 CEBPAP49715 358 aaPredicted RBP25.7■■□□□ 1.7
SCAMP3-208ENST00000490999 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.7
SCAMP3-208ENST00000490999 MYO5CQ9NQX4 1742 aa25.69■■□□□ 1.7
SCAMP3-208ENST00000490999 ARHGAP5Q13017 1502 aa25.63■■□□□ 1.69
SCAMP3-208ENST00000490999 EFCAB2Q5VUJ9 269 aa25.63■■□□□ 1.69
SCAMP3-208ENST00000490999 ZNF518AQ6AHZ1 1483 aa25.63■■□□□ 1.69
SCAMP3-208ENST00000490999 FMN1Q68DA7 1419 aa25.62■■□□□ 1.69
SCAMP3-208ENST00000490999 KDM5CP41229 1560 aa25.61■■□□□ 1.69
SCAMP3-208ENST00000490999 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
SCAMP3-208ENST00000490999 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
SCAMP3-208ENST00000490999 UHRF1BP1Q6BDS2 1440 aa25.59■■□□□ 1.69
SCAMP3-208ENST00000490999 STRCQ7RTU9 1775 aa25.59■■□□□ 1.69
SCAMP3-208ENST00000490999 AFAP1Q8N556 730 aa25.58■■□□□ 1.69
SCAMP3-208ENST00000490999 TROQ12816 1431 aaPredicted RBP25.57■■□□□ 1.68
SCAMP3-208ENST00000490999 ABCA6Q8N139 1617 aa25.56■■□□□ 1.68
SCAMP3-208ENST00000490999 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
SCAMP3-208ENST00000490999 UBTFP17480 764 aaKnown RBP25.55■■□□□ 1.68
SCAMP3-208ENST00000490999 DISP3Q9P2K9 1392 aa25.54■■□□□ 1.68
SCAMP3-208ENST00000490999 LRRIQ1Q96JM4 1722 aa25.53■■□□□ 1.68
SCAMP3-208ENST00000490999 CDK11AQ9UQ88 783 aaPredicted RBP25.52■■□□□ 1.68
SCAMP3-208ENST00000490999 CLIP1P30622 1438 aa25.52■■□□□ 1.68
SCAMP3-208ENST00000490999 ILDR2Q71H61 639 aa25.5■■□□□ 1.67
SCAMP3-208ENST00000490999 REREQ9P2R6 1566 aa25.5■■□□□ 1.67
SCAMP3-208ENST00000490999 C3P01024 1663 aa25.49■■□□□ 1.67
SCAMP3-208ENST00000490999 ABCC1P33527 1531 aa25.48■■□□□ 1.67
SCAMP3-208ENST00000490999 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
SCAMP3-208ENST00000490999 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
SCAMP3-208ENST00000490999 PREX2Q70Z35 1606 aa25.46■■□□□ 1.67
SCAMP3-208ENST00000490999 DMRT2Q9Y5R5 561 aa25.46■■□□□ 1.67
SCAMP3-208ENST00000490999 MLH3Q9UHC1 1453 aa25.46■■□□□ 1.67
SCAMP3-208ENST00000490999 ITSN2Q9NZM3 1697 aa25.43■■□□□ 1.66
SCAMP3-208ENST00000490999 SPATA31D1Q6ZQQ2 1576 aa25.42■■□□□ 1.66
SCAMP3-208ENST00000490999 AGLP35573 1532 aa25.42■■□□□ 1.66
SCAMP3-208ENST00000490999 PTPRTO14522 1441 aa25.4■■□□□ 1.66
SCAMP3-208ENST00000490999 ESF1Q9H501 851 aaKnown RBP25.39■■□□□ 1.66
SCAMP3-208ENST00000490999 LTBP4Q8N2S1 1624 aa25.38■■□□□ 1.65
SCAMP3-208ENST00000490999 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
SCAMP3-208ENST00000490999 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
SCAMP3-208ENST00000490999 CCDC18Q5T9S5 1454 aa25.34■■□□□ 1.65
SCAMP3-208ENST00000490999 SOCS7O14512 581 aa25.33■■□□□ 1.65
SCAMP3-208ENST00000490999 SETD1BQ9UPS6 1966 aaKnown RBP25.31■■□□□ 1.64
SCAMP3-208ENST00000490999 CASKIN1Q8WXD9 1431 aa25.31■■□□□ 1.64
SCAMP3-208ENST00000490999 CNTLNQ9NXG0 1405 aa25.31■■□□□ 1.64
SCAMP3-208ENST00000490999 CDC42BPAQ5VT25 1732 aa25.31■■□□□ 1.64
SCAMP3-208ENST00000490999 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
SCAMP3-208ENST00000490999 SYCP2Q9BX26 1530 aa25.3■■□□□ 1.64
SCAMP3-208ENST00000490999 CAMSAP1Q5T5Y3 1602 aa25.3■■□□□ 1.64
SCAMP3-208ENST00000490999 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
SCAMP3-208ENST00000490999 IQSEC2Q5JU85 1478 aa25.24■■□□□ 1.63
SCAMP3-208ENST00000490999 NPATQ14207 1427 aa25.24■■□□□ 1.63
SCAMP3-208ENST00000490999 MROH2AA6NES4 1674 aa25.23■■□□□ 1.63
SCAMP3-208ENST00000490999 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
SCAMP3-208ENST00000490999 NCKAP5LQ9HCH0 1330 aa25.21■■□□□ 1.63
SCAMP3-208ENST00000490999 MYO3AQ8NEV4 1616 aa25.21■■□□□ 1.63
SCAMP3-208ENST00000490999 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
SCAMP3-208ENST00000490999 ZMYM3Q14202 1370 aa25.2■■□□□ 1.63
SCAMP3-208ENST00000490999 ZNF335Q9H4Z2 1342 aaPredicted RBP25.2■■□□□ 1.62
SCAMP3-208ENST00000490999 ATP7AQ04656 1500 aa25.2■■□□□ 1.62
SCAMP3-208ENST00000490999 CLTCQ00610 1675 aaKnown RBP25.2■■□□□ 1.62
SCAMP3-208ENST00000490999 SPAG9O60271 1321 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-208ENST00000490999 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-208ENST00000490999 PLXNC1O60486 1568 aa25.18■■□□□ 1.62
SCAMP3-208ENST00000490999 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
SCAMP3-208ENST00000490999 HNRNPMP52272 730 aaKnown RBP eCLIP25.17■■□□□ 1.62
SCAMP3-208ENST00000490999 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
SCAMP3-208ENST00000490999 ZNF142P52746 1687 aaPredicted RBP25.16■■□□□ 1.62
SCAMP3-208ENST00000490999 CEP170BQ9Y4F5 1589 aaPredicted RBP25.15■■□□□ 1.62
SCAMP3-208ENST00000490999 A2MP01023 1474 aa25.13■■□□□ 1.61
SCAMP3-208ENST00000490999 PTPRKQ15262 1439 aa25.12■■□□□ 1.61
SCAMP3-208ENST00000490999 UBAP1LF5GYI3 381 aa25.11■■□□□ 1.61
SCAMP3-208ENST00000490999 PLA2R1Q13018 1463 aa25.1■■□□□ 1.61
SCAMP3-208ENST00000490999 TCOF1Q13428 1488 aaKnown RBP25.1■■□□□ 1.61
SCAMP3-208ENST00000490999 GGT6Q6P531 493 aa25.08■■□□□ 1.61
SCAMP3-208ENST00000490999 KIAA1107Q9UPP5 1409 aa25.07■■□□□ 1.6
SCAMP3-208ENST00000490999 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
SCAMP3-208ENST00000490999 PLEKHH2Q8IVE3 1493 aa25.07■■□□□ 1.6
SCAMP3-208ENST00000490999 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
SCAMP3-208ENST00000490999 PKD2Q13563 968 aa25.03■■□□□ 1.6
SCAMP3-208ENST00000490999 PPP6R1Q9UPN7 881 aa25.01■■□□□ 1.59
SCAMP3-208ENST00000490999 ZNF644Q9H582 1327 aaPredicted RBP25■■□□□ 1.59
SCAMP3-208ENST00000490999 TIAM1Q13009 1591 aa25■■□□□ 1.59
SCAMP3-208ENST00000490999 ADGBQ8N7X0 1667 aa25■■□□□ 1.59
SCAMP3-208ENST00000490999 A2ML1A8K2U0 1454 aa24.98■■□□□ 1.59
SCAMP3-208ENST00000490999 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
SCAMP3-208ENST00000490999 DNMT1P26358 1616 aaKnown RBP24.97■■□□□ 1.59
SCAMP3-208ENST00000490999 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
SCAMP3-208ENST00000490999 NEURL4Q96JN8 1562 aa24.95■■□□□ 1.58
SCAMP3-208ENST00000490999 MBD5Q9P267 1494 aa24.94■■□□□ 1.58
SCAMP3-208ENST00000490999 PIP4K2BP78356 416 aa24.91■■□□□ 1.58
SCAMP3-208ENST00000490999 MED1Q15648 1581 aaPredicted RBP24.91■■□□□ 1.58
SCAMP3-208ENST00000490999 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms