RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 ARID3CA6NKF2 412 aa14.45□□□□□ -0.1
RN7SL239P-201ENST00000490061 C9orf84Q5VXU9 1444 aa14.44□□□□□ -0.1
RN7SL239P-201ENST00000490061 ATP10AO60312 1499 aa14.44□□□□□ -0.1
RN7SL239P-201ENST00000490061 NUP153P49790 1475 aaKnown RBP14.43□□□□□ -0.1
RN7SL239P-201ENST00000490061 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
RN7SL239P-201ENST00000490061 STRCQ7RTU9 1775 aa14.41□□□□□ -0.1
RN7SL239P-201ENST00000490061 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
RN7SL239P-201ENST00000490061 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
RN7SL239P-201ENST00000490061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.4□□□□□ -0.1
RN7SL239P-201ENST00000490061 MLECQ14165 292 aa14.39□□□□□ -0.11
RN7SL239P-201ENST00000490061 SCAPERQ9BY12 1400 aa14.38□□□□□ -0.11
RN7SL239P-201ENST00000490061 PLCH2O75038 1416 aa14.37□□□□□ -0.11
RN7SL239P-201ENST00000490061 SIGLEC1Q9BZZ2 1709 aa14.35□□□□□ -0.11
RN7SL239P-201ENST00000490061 EFCAB2Q5VUJ9 269 aa14.35□□□□□ -0.11
RN7SL239P-201ENST00000490061 ZNF518AQ6AHZ1 1483 aa14.35□□□□□ -0.11
RN7SL239P-201ENST00000490061 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
RN7SL239P-201ENST00000490061 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
RN7SL239P-201ENST00000490061 LTBP4Q8N2S1 1624 aa14.33□□□□□ -0.11
RN7SL239P-201ENST00000490061 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
RN7SL239P-201ENST00000490061 CNTLNQ9NXG0 1405 aa14.32□□□□□ -0.12
RN7SL239P-201ENST00000490061 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
RN7SL239P-201ENST00000490061 AGLP35573 1532 aa14.31□□□□□ -0.12
RN7SL239P-201ENST00000490061 NCOA1Q15788 1441 aa14.3□□□□□ -0.12
RN7SL239P-201ENST00000490061 CEBPAP49715 358 aaPredicted RBP14.29□□□□□ -0.12
RN7SL239P-201ENST00000490061 KDM5CP41229 1560 aa14.28□□□□□ -0.12
RN7SL239P-201ENST00000490061 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
RN7SL239P-201ENST00000490061 MYO5CQ9NQX4 1742 aa14.27□□□□□ -0.12
RN7SL239P-201ENST00000490061 NPATQ14207 1427 aa14.26□□□□□ -0.13
RN7SL239P-201ENST00000490061 EEA1Q15075 1411 aa14.26□□□□□ -0.13
RN7SL239P-201ENST00000490061 MLH3Q9UHC1 1453 aa14.25□□□□□ -0.13
RN7SL239P-201ENST00000490061 PKD2Q13563 968 aa14.25□□□□□ -0.13
RN7SL239P-201ENST00000490061 C3P01024 1663 aa14.25□□□□□ -0.13
RN7SL239P-201ENST00000490061 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
RN7SL239P-201ENST00000490061 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
RN7SL239P-201ENST00000490061 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
RN7SL239P-201ENST00000490061 PLA2R1Q13018 1463 aa14.21□□□□□ -0.13
RN7SL239P-201ENST00000490061 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
RN7SL239P-201ENST00000490061 CLIP1P30622 1438 aa14.2□□□□□ -0.14
RN7SL239P-201ENST00000490061 MROH2AA6NES4 1674 aa14.2□□□□□ -0.14
RN7SL239P-201ENST00000490061 KIF14Q15058 1648 aa14.19□□□□□ -0.14
RN7SL239P-201ENST00000490061 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
RN7SL239P-201ENST00000490061 ARHGAP5Q13017 1502 aa14.19□□□□□ -0.14
RN7SL239P-201ENST00000490061 AFAP1Q8N556 730 aa14.18□□□□□ -0.14
RN7SL239P-201ENST00000490061 CDK13Q14004 1512 aaKnown RBP14.16□□□□□ -0.14
RN7SL239P-201ENST00000490061 TOM1O60784 492 aa14.16□□□□□ -0.14
RN7SL239P-201ENST00000490061 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
RN7SL239P-201ENST00000490061 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
RN7SL239P-201ENST00000490061 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
RN7SL239P-201ENST00000490061 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
RN7SL239P-201ENST00000490061 ZNF142P52746 1687 aaPredicted RBP14.14□□□□□ -0.15
RN7SL239P-201ENST00000490061 TCOF1Q13428 1488 aaKnown RBP14.13□□□□□ -0.15
RN7SL239P-201ENST00000490061 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
RN7SL239P-201ENST00000490061 ZMYM3Q14202 1370 aa14.12□□□□□ -0.15
RN7SL239P-201ENST00000490061 CPS1P31327 1500 aa14.11□□□□□ -0.15
RN7SL239P-201ENST00000490061 RANGAP1P46060 587 aaPredicted RBP14.11□□□□□ -0.15
RN7SL239P-201ENST00000490061 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
RN7SL239P-201ENST00000490061 ABCC1P33527 1531 aa14.1□□□□□ -0.15
RN7SL239P-201ENST00000490061 SUPT6HQ7KZ85 1726 aaKnown RBP14.09□□□□□ -0.15
RN7SL239P-201ENST00000490061 NCKAP5LQ9HCH0 1330 aa14.09□□□□□ -0.15
RN7SL239P-201ENST00000490061 PTPRKQ15262 1439 aa14.08□□□□□ -0.15
RN7SL239P-201ENST00000490061 CEP170BQ9Y4F5 1589 aaPredicted RBP14.08□□□□□ -0.16
RN7SL239P-201ENST00000490061 KIDINS220Q9ULH0 1771 aa14.07□□□□□ -0.16
RN7SL239P-201ENST00000490061 PREX2Q70Z35 1606 aa14.07□□□□□ -0.16
RN7SL239P-201ENST00000490061 ITSN2Q9NZM3 1697 aa14.07□□□□□ -0.16
RN7SL239P-201ENST00000490061 CDC42BPBQ9Y5S2 1711 aa14.07□□□□□ -0.16
RN7SL239P-201ENST00000490061 MYO3AQ8NEV4 1616 aa14.06□□□□□ -0.16
RN7SL239P-201ENST00000490061 HSPA1LP34931 641 aa14.06□□□□□ -0.16
RN7SL239P-201ENST00000490061 ATP1B4Q9UN42 357 aaPredicted RBP14.06□□□□□ -0.16
RN7SL239P-201ENST00000490061 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
RN7SL239P-201ENST00000490061 A2ML1A8K2U0 1454 aa14.03□□□□□ -0.16
RN7SL239P-201ENST00000490061 CCDC18Q5T9S5 1454 aa14.03□□□□□ -0.16
RN7SL239P-201ENST00000490061 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
RN7SL239P-201ENST00000490061 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
RN7SL239P-201ENST00000490061 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
RN7SL239P-201ENST00000490061 PIP4K2BP78356 416 aa14□□□□□ -0.17
RN7SL239P-201ENST00000490061 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
RN7SL239P-201ENST00000490061 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
RN7SL239P-201ENST00000490061 KIAA1107Q9UPP5 1409 aa13.99□□□□□ -0.17
RN7SL239P-201ENST00000490061 PLXNC1O60486 1568 aa13.99□□□□□ -0.17
RN7SL239P-201ENST00000490061 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
RN7SL239P-201ENST00000490061 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
RN7SL239P-201ENST00000490061 A2MP01023 1474 aa13.98□□□□□ -0.17
RN7SL239P-201ENST00000490061 ARHGAP35Q9NRY4 1499 aa13.97□□□□□ -0.17
RN7SL239P-201ENST00000490061 DNMT1P26358 1616 aaKnown RBP13.97□□□□□ -0.17
RN7SL239P-201ENST00000490061 ATP7AQ04656 1500 aa13.96□□□□□ -0.17
RN7SL239P-201ENST00000490061 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
RN7SL239P-201ENST00000490061 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
RN7SL239P-201ENST00000490061 CDC42BPAQ5VT25 1732 aa13.94□□□□□ -0.18
RN7SL239P-201ENST00000490061 GGT6Q6P531 493 aa13.94□□□□□ -0.18
RN7SL239P-201ENST00000490061 THEMISQ8N1K5 641 aaPredicted RBP13.94□□□□□ -0.18
RN7SL239P-201ENST00000490061 MED14O60244 1454 aa13.93□□□□□ -0.18
RN7SL239P-201ENST00000490061 ADGBQ8N7X0 1667 aa13.93□□□□□ -0.18
RN7SL239P-201ENST00000490061 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
RN7SL239P-201ENST00000490061 CASKIN1Q8WXD9 1431 aa13.92□□□□□ -0.18
RN7SL239P-201ENST00000490061 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
RN7SL239P-201ENST00000490061 DEPDC5O75140 1603 aa13.92□□□□□ -0.18
RN7SL239P-201ENST00000490061 TNRQ92752 1358 aa13.91□□□□□ -0.18
RN7SL239P-201ENST00000490061 NLRP1Q9C000 1473 aa13.91□□□□□ -0.18
RN7SL239P-201ENST00000490061 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
RN7SL239P-201ENST00000490061 SYNMO15061 1565 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms