RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 SHROOM2Q13796 1616 aa38.22■■■■□ 3.71
KCNC4-207ENST00000489935 ROCK1Q13464 1354 aa38.22■■■■□ 3.71
KCNC4-207ENST00000489935 PLEKHD1A6NEE1 506 aa38.22■■■■□ 3.71
KCNC4-207ENST00000489935 CAMSAP2Q08AD1 1489 aa38.2■■■■□ 3.71
KCNC4-207ENST00000489935 PPP1R15AO75807 674 aaPredicted RBP38.19■■■■□ 3.7
KCNC4-207ENST00000489935 DENND4BO75064 1496 aaPredicted RBP38.16■■■■□ 3.7
KCNC4-207ENST00000489935 TRIM52Q96A61 297 aa38.15■■■■□ 3.7
KCNC4-207ENST00000489935 ABCC10Q5T3U5 1492 aa38.12■■■■□ 3.69
KCNC4-207ENST00000489935 CDC42BPAQ5VT25 1732 aa38.11■■■■□ 3.69
KCNC4-207ENST00000489935 ZNF777Q9ULD5 760 aaPredicted RBP38.09■■■■□ 3.69
KCNC4-207ENST00000489935 TONSLQ96HA7 1378 aa38.08■■■■□ 3.69
KCNC4-207ENST00000489935 ERCC6L2Q5T890 1561 aa38.06■■■■□ 3.68
KCNC4-207ENST00000489935 MPHOSPH9Q99550 1183 aa38.04■■■■□ 3.68
KCNC4-207ENST00000489935 ACIN1Q9UKV3 1341 aaKnown RBP38.02■■■■□ 3.68
KCNC4-207ENST00000489935 CROCC2H7BZ55 1655 aa38■■■■□ 3.67
KCNC4-207ENST00000489935 ADGBQ8N7X0 1667 aa37.99■■■■□ 3.67
KCNC4-207ENST00000489935 NCOA1Q15788 1441 aa37.97■■■■□ 3.67
KCNC4-207ENST00000489935 CENPBP07199 599 aaPredicted RBP37.96■■■■□ 3.67
KCNC4-207ENST00000489935 CLASP1Q7Z460 1538 aa37.94■■■■□ 3.66
KCNC4-207ENST00000489935 KDM5BQ9UGL1 1544 aa37.94■■■■□ 3.66
KCNC4-207ENST00000489935 SCAF1Q9H7N4 1312 aaKnown RBP37.94■■■■□ 3.66
KCNC4-207ENST00000489935 ADGRL2O95490 1459 aa37.93■■■■□ 3.66
KCNC4-207ENST00000489935 FOXD1Q16676 465 aa37.88■■■■□ 3.65
KCNC4-207ENST00000489935 YTHDC1Q96MU7 727 aaKnown RBP37.87■■■■□ 3.65
KCNC4-207ENST00000489935 ABCC2Q92887 1545 aa37.86■■■■□ 3.65
KCNC4-207ENST00000489935 ANKRD30AQ9BXX3 1397 aa37.82■■■■□ 3.65
KCNC4-207ENST00000489935 CDC42BPBQ9Y5S2 1711 aa37.81■■■■□ 3.64
KCNC4-207ENST00000489935 ANKRD30BQ9BXX2 1392 aa37.79■■■■□ 3.64
KCNC4-207ENST00000489935 HIRIP3Q9BW71 556 aaPredicted RBP37.79■■■■□ 3.64
KCNC4-207ENST00000489935 SHANK2Q9UPX8 1470 aa37.78■■■■□ 3.64
KCNC4-207ENST00000489935 PREX2Q70Z35 1606 aa37.78■■■■□ 3.64
KCNC4-207ENST00000489935 SLC4A1APQ9BWU0 796 aaKnown RBP37.77■■■■□ 3.64
KCNC4-207ENST00000489935 PZPP20742 1482 aa37.76■■■■□ 3.63
KCNC4-207ENST00000489935 C9orf84Q5VXU9 1444 aa37.75■■■■□ 3.63
KCNC4-207ENST00000489935 HNRNPMP52272 730 aaKnown RBP eCLIP37.75■■■■□ 3.63
KCNC4-207ENST00000489935 SAMD9LQ8IVG5 1584 aa37.73■■■■□ 3.63
KCNC4-207ENST00000489935 ARHGEF5Q12774 1597 aa37.73■■■■□ 3.63
KCNC4-207ENST00000489935 MBD5Q9P267 1494 aa37.72■■■■□ 3.63
KCNC4-207ENST00000489935 TTC37Q6PGP7 1564 aa37.71■■■■□ 3.63
KCNC4-207ENST00000489935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.7■■■■□ 3.63
KCNC4-207ENST00000489935 ANKRD50Q9ULJ7 1429 aa37.7■■■■□ 3.62
KCNC4-207ENST00000489935 TSPY4P0CV99 314 aa37.68■■■■□ 3.62
KCNC4-207ENST00000489935 TSPY10P0CW01 314 aa37.68■■■■□ 3.62
KCNC4-207ENST00000489935 DDX10Q13206 875 aaKnown RBP37.68■■■■□ 3.62
KCNC4-207ENST00000489935 RPRD2Q5VT52 1461 aaKnown RBP37.67■■■■□ 3.62
KCNC4-207ENST00000489935 L3MBTL2Q969R5 705 aa37.66■■■■□ 3.62
KCNC4-207ENST00000489935 UHRF1BP1LA0JNW5 1464 aa37.65■■■■□ 3.62
KCNC4-207ENST00000489935 ZCCHC11Q5TAX3 1644 aaKnown RBP37.63■■■■□ 3.62
KCNC4-207ENST00000489935 CCDC141Q6ZP82 1450 aa37.59■■■■□ 3.61
KCNC4-207ENST00000489935 ARHGAP5Q13017 1502 aa37.58■■■■□ 3.61
KCNC4-207ENST00000489935 KCNH8Q96L42 1107 aa37.58■■■■□ 3.61
KCNC4-207ENST00000489935 MYO5CQ9NQX4 1742 aa37.57■■■■□ 3.61
KCNC4-207ENST00000489935 RSPH4AQ5TD94 716 aa37.55■■■■□ 3.6
KCNC4-207ENST00000489935 KIF15Q9NS87 1388 aa37.55■■■■□ 3.6
KCNC4-207ENST00000489935 KIAA1107Q9UPP5 1409 aa37.55■■■■□ 3.6
KCNC4-207ENST00000489935 TEX14Q8IWB6 1497 aa37.54■■■■□ 3.6
KCNC4-207ENST00000489935 SYCP2Q9BX26 1530 aa37.53■■■■□ 3.6
KCNC4-207ENST00000489935 PKD2Q13563 968 aa37.51■■■■□ 3.6
KCNC4-207ENST00000489935 NUP155O75694 1391 aa37.49■■■■□ 3.59
KCNC4-207ENST00000489935 GTF3C3Q9Y5Q9 886 aa37.48■■■■□ 3.59
KCNC4-207ENST00000489935 KDM5DQ9BY66 1539 aa37.45■■■■□ 3.59
KCNC4-207ENST00000489935 HSPA5P11021 654 aaKnown RBP37.43■■■■□ 3.58
KCNC4-207ENST00000489935 NBPF8Q3BBV2 869 aa37.43■■■■□ 3.58
KCNC4-207ENST00000489935 MAST1Q9Y2H9 1570 aa37.43■■■■□ 3.58
KCNC4-207ENST00000489935 PLCH2O75038 1416 aa37.42■■■■□ 3.58
KCNC4-207ENST00000489935 PLEKHH2Q8IVE3 1493 aa37.39■■■■□ 3.58
KCNC4-207ENST00000489935 ARHGEF12Q9NZN5 1544 aa37.38■■■■□ 3.57
KCNC4-207ENST00000489935 EIF4G2P78344 907 aaKnown RBP eCLIP37.35■■■■□ 3.57
KCNC4-207ENST00000489935 EFCAB2Q5VUJ9 269 aa37.31■■■■□ 3.56
KCNC4-207ENST00000489935 PLXNC1O60486 1568 aa37.28■■■■□ 3.56
KCNC4-207ENST00000489935 WASHC2AQ641Q2 1341 aa37.25■■■■□ 3.55
KCNC4-207ENST00000489935 FAM135AQ9P2D6 1515 aa37.24■■■■□ 3.55
KCNC4-207ENST00000489935 ABCC1P33527 1531 aa37.24■■■■□ 3.55
KCNC4-207ENST00000489935 ANP32CO43423 234 aa37.21■■■■□ 3.55
KCNC4-207ENST00000489935 WDR7Q9Y4E6 1490 aa37.2■■■■□ 3.55
KCNC4-207ENST00000489935 UNC13BO14795 1591 aa37.2■■■■□ 3.55
KCNC4-207ENST00000489935 TRAPPC8Q9Y2L5 1435 aa37.18■■■■□ 3.54
KCNC4-207ENST00000489935 OSCARQ8IYS5 282 aa37.17■■■■□ 3.54
KCNC4-207ENST00000489935 ARAP3Q8WWN8 1544 aa37.17■■■■□ 3.54
KCNC4-207ENST00000489935 SPATA31E1Q6ZUB1 1445 aa37.16■■■■□ 3.54
KCNC4-207ENST00000489935 DUOX2Q9NRD8 1548 aa37.15■■■■□ 3.54
KCNC4-207ENST00000489935 C11orf95C9JLR9 678 aaPredicted RBP37.14■■■■□ 3.54
KCNC4-207ENST00000489935 CCER2I3L3R5 266 aa37.13■■■■□ 3.53
KCNC4-207ENST00000489935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.09■■■■□ 3.53
KCNC4-207ENST00000489935 ABCA9Q8IUA7 1624 aa37.07■■■■□ 3.52
KCNC4-207ENST00000489935 ERBINQ96RT1 1412 aa37.07■■■■□ 3.52
KCNC4-207ENST00000489935 IQGAP3Q86VI3 1631 aa37.06■■■■□ 3.52
KCNC4-207ENST00000489935 ZNF326Q5BKZ1 582 aaKnown RBP37.06■■■■□ 3.52
KCNC4-207ENST00000489935 UHRF1BP1Q6BDS2 1440 aa37.06■■■■□ 3.52
KCNC4-207ENST00000489935 CCDC7Q96M83 1385 aa37.05■■■■□ 3.52
KCNC4-207ENST00000489935 ASXL2Q76L83 1435 aa37.04■■■■□ 3.52
KCNC4-207ENST00000489935 AFAP1Q8N556 730 aa37.03■■■■□ 3.52
KCNC4-207ENST00000489935 MAGI2Q86UL8 1455 aa37.01■■■■□ 3.52
KCNC4-207ENST00000489935 SPAG9O60271 1321 aaKnown RBP37■■■■□ 3.51
KCNC4-207ENST00000489935 FANCAO15360 1455 aa36.99■■■■□ 3.51
KCNC4-207ENST00000489935 POLR1AO95602 1720 aaPredicted RBP36.99■■■■□ 3.51
KCNC4-207ENST00000489935 PLA2R1Q13018 1463 aa36.99■■■■□ 3.51
KCNC4-207ENST00000489935 RTEL1-TNFRSF6BF6WH68 1400 aa36.98■■■■□ 3.51
KCNC4-207ENST00000489935 CNTLNQ9NXG0 1405 aa36.96■■■■□ 3.51
KCNC4-207ENST00000489935 ZFYVE16Q7Z3T8 1539 aa36.95■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms