RNA–Protein interactions for RNA: ENST00000489426.5

SRPK3-208, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SRPK3, Length 4,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-208ENST00000489426 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
SRPK3-208ENST00000489426 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
SRPK3-208ENST00000489426 DNTTIP2Q5QJE6 756 aaKnown RBP16.53■□□□□ 0.24
SRPK3-208ENST00000489426 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.23
SRPK3-208ENST00000489426 PTMAP06454 111 aaKnown RBP16.51■□□□□ 0.23
SRPK3-208ENST00000489426 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
SRPK3-208ENST00000489426 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
SRPK3-208ENST00000489426 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
SRPK3-208ENST00000489426 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
SRPK3-208ENST00000489426 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
SRPK3-208ENST00000489426 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
SRPK3-208ENST00000489426 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
SRPK3-208ENST00000489426 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
SRPK3-208ENST00000489426 NUP155O75694 1391 aa16.46■□□□□ 0.23
SRPK3-208ENST00000489426 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
SRPK3-208ENST00000489426 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
SRPK3-208ENST00000489426 L1TD1Q5T7N2 865 aaKnown RBP16.44■□□□□ 0.22
SRPK3-208ENST00000489426 KIF21BO75037 1637 aa16.44■□□□□ 0.22
SRPK3-208ENST00000489426 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
SRPK3-208ENST00000489426 KIF3BO15066 747 aa16.43■□□□□ 0.22
SRPK3-208ENST00000489426 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
SRPK3-208ENST00000489426 KANK1Q14678 1352 aa16.42■□□□□ 0.22
SRPK3-208ENST00000489426 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
SRPK3-208ENST00000489426 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
SRPK3-208ENST00000489426 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
SRPK3-208ENST00000489426 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
SRPK3-208ENST00000489426 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
SRPK3-208ENST00000489426 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
SRPK3-208ENST00000489426 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
SRPK3-208ENST00000489426 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
SRPK3-208ENST00000489426 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
SRPK3-208ENST00000489426 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
SRPK3-208ENST00000489426 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
SRPK3-208ENST00000489426 SPRYD3Q8NCJ5 442 aa16.35■□□□□ 0.21
SRPK3-208ENST00000489426 POGKQ9P215 609 aa16.34■□□□□ 0.21
SRPK3-208ENST00000489426 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
SRPK3-208ENST00000489426 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.21
SRPK3-208ENST00000489426 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
SRPK3-208ENST00000489426 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
SRPK3-208ENST00000489426 PLCB2Q00722 1185 aa16.33■□□□□ 0.21
SRPK3-208ENST00000489426 FRAT1Q92837 279 aaPredicted RBP16.33■□□□□ 0.2
SRPK3-208ENST00000489426 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
SRPK3-208ENST00000489426 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
SRPK3-208ENST00000489426 MSNP26038 577 aaKnown RBP16.33■□□□□ 0.2
SRPK3-208ENST00000489426 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
SRPK3-208ENST00000489426 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
SRPK3-208ENST00000489426 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
SRPK3-208ENST00000489426 L3MBTL2Q969R5 705 aa16.32■□□□□ 0.2
SRPK3-208ENST00000489426 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
SRPK3-208ENST00000489426 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
SRPK3-208ENST00000489426 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
SRPK3-208ENST00000489426 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
SRPK3-208ENST00000489426 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
SRPK3-208ENST00000489426 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
SRPK3-208ENST00000489426 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
SRPK3-208ENST00000489426 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
SRPK3-208ENST00000489426 ARID3AQ99856 593 aa16.3■□□□□ 0.2
SRPK3-208ENST00000489426 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
SRPK3-208ENST00000489426 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
SRPK3-208ENST00000489426 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
SRPK3-208ENST00000489426 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
SRPK3-208ENST00000489426 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
SRPK3-208ENST00000489426 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
SRPK3-208ENST00000489426 STK26Q9P289 416 aa16.28■□□□□ 0.2
SRPK3-208ENST00000489426 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
SRPK3-208ENST00000489426 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.2
SRPK3-208ENST00000489426 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
SRPK3-208ENST00000489426 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
SRPK3-208ENST00000489426 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
SRPK3-208ENST00000489426 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
SRPK3-208ENST00000489426 FGD6Q6ZV73 1430 aa16.25■□□□□ 0.19
SRPK3-208ENST00000489426 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
SRPK3-208ENST00000489426 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
SRPK3-208ENST00000489426 HSP90AA2PQ14568 343 aaPredicted RBP16.25■□□□□ 0.19
SRPK3-208ENST00000489426 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
SRPK3-208ENST00000489426 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
SRPK3-208ENST00000489426 MYOM3Q5VTT5 1437 aa16.23■□□□□ 0.19
SRPK3-208ENST00000489426 TMF1P82094 1093 aa16.23■□□□□ 0.19
SRPK3-208ENST00000489426 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
SRPK3-208ENST00000489426 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
SRPK3-208ENST00000489426 GSE1Q14687 1217 aa16.21■□□□□ 0.18
SRPK3-208ENST00000489426 GOLGA6L3A6NEY3 463 aa16.2■□□□□ 0.18
SRPK3-208ENST00000489426 FAM69CQ0P6D2 419 aa16.2■□□□□ 0.18
SRPK3-208ENST00000489426 SRPK2P78362 688 aaKnown RBP16.19■□□□□ 0.18
SRPK3-208ENST00000489426 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
SRPK3-208ENST00000489426 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
SRPK3-208ENST00000489426 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
SRPK3-208ENST00000489426 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
SRPK3-208ENST00000489426 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
SRPK3-208ENST00000489426 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
SRPK3-208ENST00000489426 SLC4A3P48751 1232 aa16.17■□□□□ 0.18
SRPK3-208ENST00000489426 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
SRPK3-208ENST00000489426 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
SRPK3-208ENST00000489426 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
SRPK3-208ENST00000489426 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
SRPK3-208ENST00000489426 SOX12O15370 315 aa16.14■□□□□ 0.17
SRPK3-208ENST00000489426 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
SRPK3-208ENST00000489426 PDE4AP27815 886 aa16.13■□□□□ 0.17
SRPK3-208ENST00000489426 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
SRPK3-208ENST00000489426 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms