RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
SH3YL1-225ENST00000488979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.55■□□□□ 0.24
SH3YL1-225ENST00000488979 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
SH3YL1-225ENST00000488979 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
SH3YL1-225ENST00000488979 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
SH3YL1-225ENST00000488979 HECW1Q76N89 1606 aa16.52■□□□□ 0.24
SH3YL1-225ENST00000488979 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
SH3YL1-225ENST00000488979 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
SH3YL1-225ENST00000488979 FER1L4A9Z1Z3 1794 aa16.51■□□□□ 0.23
SH3YL1-225ENST00000488979 STRCQ7RTU9 1775 aa16.51■□□□□ 0.23
SH3YL1-225ENST00000488979 ATP10AO60312 1499 aa16.5■□□□□ 0.23
SH3YL1-225ENST00000488979 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
SH3YL1-225ENST00000488979 CFAP74Q9C0B2 1584 aa16.48■□□□□ 0.23
SH3YL1-225ENST00000488979 PLCH2O75038 1416 aa16.48■□□□□ 0.23
SH3YL1-225ENST00000488979 PREX1Q8TCU6 1659 aa16.46■□□□□ 0.23
SH3YL1-225ENST00000488979 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
SH3YL1-225ENST00000488979 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
SH3YL1-225ENST00000488979 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
SH3YL1-225ENST00000488979 SETD1BQ9UPS6 1966 aaKnown RBP16.44■□□□□ 0.22
SH3YL1-225ENST00000488979 UHRF1BP1Q6BDS2 1440 aa16.44■□□□□ 0.22
SH3YL1-225ENST00000488979 PTPRTO14522 1441 aa16.42■□□□□ 0.22
SH3YL1-225ENST00000488979 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
SH3YL1-225ENST00000488979 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
SH3YL1-225ENST00000488979 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
SH3YL1-225ENST00000488979 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
SH3YL1-225ENST00000488979 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
SH3YL1-225ENST00000488979 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
SH3YL1-225ENST00000488979 CDK11AQ9UQ88 783 aaPredicted RBP16.36■□□□□ 0.21
SH3YL1-225ENST00000488979 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
SH3YL1-225ENST00000488979 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
SH3YL1-225ENST00000488979 TRAPPC8Q9Y2L5 1435 aa16.34■□□□□ 0.21
SH3YL1-225ENST00000488979 ZNF518AQ6AHZ1 1483 aa16.33■□□□□ 0.2
SH3YL1-225ENST00000488979 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
SH3YL1-225ENST00000488979 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
SH3YL1-225ENST00000488979 C3P01024 1663 aa16.3■□□□□ 0.2
SH3YL1-225ENST00000488979 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
SH3YL1-225ENST00000488979 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
SH3YL1-225ENST00000488979 NCOA1Q15788 1441 aa16.29■□□□□ 0.2
SH3YL1-225ENST00000488979 ZNF335Q9H4Z2 1342 aaPredicted RBP16.29■□□□□ 0.2
SH3YL1-225ENST00000488979 KDM5CP41229 1560 aa16.28■□□□□ 0.2
SH3YL1-225ENST00000488979 DIP2CQ9Y2E4 1556 aa16.28■□□□□ 0.2
SH3YL1-225ENST00000488979 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
SH3YL1-225ENST00000488979 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
SH3YL1-225ENST00000488979 KIF14Q15058 1648 aa16.27■□□□□ 0.19
SH3YL1-225ENST00000488979 ARHGAP5Q13017 1502 aa16.26■□□□□ 0.19
SH3YL1-225ENST00000488979 MLH3Q9UHC1 1453 aa16.26■□□□□ 0.19
SH3YL1-225ENST00000488979 TROQ12816 1431 aaPredicted RBP16.26■□□□□ 0.19
SH3YL1-225ENST00000488979 CLIP1P30622 1438 aa16.24■□□□□ 0.19
SH3YL1-225ENST00000488979 REREQ9P2R6 1566 aa16.24■□□□□ 0.19
SH3YL1-225ENST00000488979 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
SH3YL1-225ENST00000488979 AGLP35573 1532 aa16.23■□□□□ 0.19
SH3YL1-225ENST00000488979 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
SH3YL1-225ENST00000488979 ABCA6Q8N139 1617 aa16.23■□□□□ 0.19
SH3YL1-225ENST00000488979 CNTLNQ9NXG0 1405 aa16.2■□□□□ 0.18
SH3YL1-225ENST00000488979 HSPA1LP34931 641 aa16.19■□□□□ 0.18
SH3YL1-225ENST00000488979 PKD2Q13563 968 aa16.19■□□□□ 0.18
SH3YL1-225ENST00000488979 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
SH3YL1-225ENST00000488979 NPATQ14207 1427 aa16.18■□□□□ 0.18
SH3YL1-225ENST00000488979 PIP4K2BP78356 416 aa16.17■□□□□ 0.18
SH3YL1-225ENST00000488979 CASKIN1Q8WXD9 1431 aa16.17■□□□□ 0.18
SH3YL1-225ENST00000488979 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
SH3YL1-225ENST00000488979 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
SH3YL1-225ENST00000488979 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
SH3YL1-225ENST00000488979 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
SH3YL1-225ENST00000488979 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.176e-7■■□□□ 11.6
SH3YL1-225ENST00000488979 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
SH3YL1-225ENST00000488979 GGT6Q6P531 493 aa16.12■□□□□ 0.17
SH3YL1-225ENST00000488979 ABCC1P33527 1531 aa16.12■□□□□ 0.17
SH3YL1-225ENST00000488979 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
SH3YL1-225ENST00000488979 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
SH3YL1-225ENST00000488979 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
SH3YL1-225ENST00000488979 TOM1O60784 492 aa16.1■□□□□ 0.17
SH3YL1-225ENST00000488979 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
SH3YL1-225ENST00000488979 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
SH3YL1-225ENST00000488979 PREX2Q70Z35 1606 aa16.09■□□□□ 0.17
SH3YL1-225ENST00000488979 ITSN2Q9NZM3 1697 aa16.09■□□□□ 0.17
SH3YL1-225ENST00000488979 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
SH3YL1-225ENST00000488979 MROH2AA6NES4 1674 aa16.08■□□□□ 0.17
SH3YL1-225ENST00000488979 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.16
SH3YL1-225ENST00000488979 MED1Q15648 1581 aaPredicted RBP16.07■□□□□ 0.16
SH3YL1-225ENST00000488979 SUPT6HQ7KZ85 1726 aaKnown RBP16.06■□□□□ 0.16
SH3YL1-225ENST00000488979 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
SH3YL1-225ENST00000488979 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
SH3YL1-225ENST00000488979 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
SH3YL1-225ENST00000488979 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
SH3YL1-225ENST00000488979 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.16
SH3YL1-225ENST00000488979 ADRA2BP18089 450 aa16.02■□□□□ 0.16
SH3YL1-225ENST00000488979 KIAA1107Q9UPP5 1409 aa16.02■□□□□ 0.15
SH3YL1-225ENST00000488979 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.15
SH3YL1-225ENST00000488979 GPATCH8Q9UKJ3 1502 aaKnown RBP16.01■□□□□ 0.15
SH3YL1-225ENST00000488979 A2MP01023 1474 aa16.01■□□□□ 0.15
SH3YL1-225ENST00000488979 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
SH3YL1-225ENST00000488979 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
SH3YL1-225ENST00000488979 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
SH3YL1-225ENST00000488979 A2ML1A8K2U0 1454 aa15.99■□□□□ 0.15
SH3YL1-225ENST00000488979 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
SH3YL1-225ENST00000488979 CFDP1Q9UEE9 299 aaPredicted RBP15.99■□□□□ 0.15
SH3YL1-225ENST00000488979 MSH5O43196 834 aa15.98■□□□□ 0.15
SH3YL1-225ENST00000488979 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
SH3YL1-225ENST00000488979 ATP7AQ04656 1500 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms