RNA–Protein interactions for RNA: ENST00000488551.5

ABCB8-216, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 4

Gene ABCB8, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-216ENST00000488551 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
ABCB8-216ENST00000488551 MLECQ14165 292 aa17.52■□□□□ 0.4
ABCB8-216ENST00000488551 EEA1Q15075 1411 aa17.52■□□□□ 0.4
ABCB8-216ENST00000488551 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.39
ABCB8-216ENST00000488551 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
ABCB8-216ENST00000488551 PLCH2O75038 1416 aa17.5■□□□□ 0.39
ABCB8-216ENST00000488551 ATP10AO60312 1499 aa17.5■□□□□ 0.39
ABCB8-216ENST00000488551 C9orf84Q5VXU9 1444 aa17.49■□□□□ 0.39
ABCB8-216ENST00000488551 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
ABCB8-216ENST00000488551 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
ABCB8-216ENST00000488551 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
ABCB8-216ENST00000488551 STRCQ7RTU9 1775 aa17.46■□□□□ 0.39
ABCB8-216ENST00000488551 DISP3Q9P2K9 1392 aa17.43■□□□□ 0.38
ABCB8-216ENST00000488551 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
ABCB8-216ENST00000488551 ZNF518AQ6AHZ1 1483 aa17.43■□□□□ 0.38
ABCB8-216ENST00000488551 UHRF1BP1Q6BDS2 1440 aa17.42■□□□□ 0.38
ABCB8-216ENST00000488551 KDM5CP41229 1560 aa17.4■□□□□ 0.38
ABCB8-216ENST00000488551 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
ABCB8-216ENST00000488551 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
ABCB8-216ENST00000488551 KIF14Q15058 1648 aa17.39■□□□□ 0.37
ABCB8-216ENST00000488551 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
ABCB8-216ENST00000488551 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
ABCB8-216ENST00000488551 SOCS7O14512 581 aa17.38■□□□□ 0.37
ABCB8-216ENST00000488551 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
ABCB8-216ENST00000488551 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
ABCB8-216ENST00000488551 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
ABCB8-216ENST00000488551 C3P01024 1663 aa17.36■□□□□ 0.37
ABCB8-216ENST00000488551 PTPRTO14522 1441 aa17.35■□□□□ 0.37
ABCB8-216ENST00000488551 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
ABCB8-216ENST00000488551 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
ABCB8-216ENST00000488551 ATP1B4Q9UN42 357 aaPredicted RBP17.33■□□□□ 0.36
ABCB8-216ENST00000488551 CLIP1P30622 1438 aa17.32■□□□□ 0.36
ABCB8-216ENST00000488551 TROQ12816 1431 aaPredicted RBP17.32■□□□□ 0.36
ABCB8-216ENST00000488551 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
ABCB8-216ENST00000488551 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
ABCB8-216ENST00000488551 CDC42BPBQ9Y5S2 1711 aa17.31■□□□□ 0.36
ABCB8-216ENST00000488551 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
ABCB8-216ENST00000488551 AGLP35573 1532 aa17.31■□□□□ 0.36
ABCB8-216ENST00000488551 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
ABCB8-216ENST00000488551 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
ABCB8-216ENST00000488551 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
ABCB8-216ENST00000488551 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
ABCB8-216ENST00000488551 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.36
ABCB8-216ENST00000488551 CNTLNQ9NXG0 1405 aa17.27■□□□□ 0.35
ABCB8-216ENST00000488551 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.35
ABCB8-216ENST00000488551 PREX2Q70Z35 1606 aa17.26■□□□□ 0.35
ABCB8-216ENST00000488551 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
ABCB8-216ENST00000488551 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
ABCB8-216ENST00000488551 ABCC1P33527 1531 aa17.25■□□□□ 0.35
ABCB8-216ENST00000488551 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
ABCB8-216ENST00000488551 KIDINS220Q9ULH0 1771 aa17.24■□□□□ 0.35
ABCB8-216ENST00000488551 MROH2AA6NES4 1674 aa17.23■□□□□ 0.35
ABCB8-216ENST00000488551 NPATQ14207 1427 aa17.21■□□□□ 0.35
ABCB8-216ENST00000488551 CAMSAP1Q5T5Y3 1602 aa17.2■□□□□ 0.34
ABCB8-216ENST00000488551 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
ABCB8-216ENST00000488551 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
ABCB8-216ENST00000488551 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
ABCB8-216ENST00000488551 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
ABCB8-216ENST00000488551 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
ABCB8-216ENST00000488551 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
ABCB8-216ENST00000488551 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
ABCB8-216ENST00000488551 ZMYM3Q14202 1370 aa17.13■□□□□ 0.33
ABCB8-216ENST00000488551 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
ABCB8-216ENST00000488551 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
ABCB8-216ENST00000488551 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
ABCB8-216ENST00000488551 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
ABCB8-216ENST00000488551 PKD2Q13563 968 aa17.1■□□□□ 0.33
ABCB8-216ENST00000488551 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
ABCB8-216ENST00000488551 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
ABCB8-216ENST00000488551 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
ABCB8-216ENST00000488551 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
ABCB8-216ENST00000488551 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
ABCB8-216ENST00000488551 PLXNC1O60486 1568 aa17.08■□□□□ 0.32
ABCB8-216ENST00000488551 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
ABCB8-216ENST00000488551 TCOF1Q13428 1488 aaKnown RBP17.08■□□□□ 0.32
ABCB8-216ENST00000488551 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
ABCB8-216ENST00000488551 FYCO1Q9BQS8 1478 aa17.06■□□□□ 0.32
ABCB8-216ENST00000488551 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
ABCB8-216ENST00000488551 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
ABCB8-216ENST00000488551 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
ABCB8-216ENST00000488551 GPATCH8Q9UKJ3 1502 aaKnown RBP17.05■□□□□ 0.32
ABCB8-216ENST00000488551 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
ABCB8-216ENST00000488551 A2MP01023 1474 aa17.04■□□□□ 0.32
ABCB8-216ENST00000488551 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
ABCB8-216ENST00000488551 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
ABCB8-216ENST00000488551 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
ABCB8-216ENST00000488551 POLR1AO95602 1720 aaPredicted RBP17■□□□□ 0.31
ABCB8-216ENST00000488551 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
ABCB8-216ENST00000488551 GGT6Q6P531 493 aa16.99■□□□□ 0.31
ABCB8-216ENST00000488551 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
ABCB8-216ENST00000488551 CFDP1Q9UEE9 299 aaPredicted RBP16.98■□□□□ 0.31
ABCB8-216ENST00000488551 CPS1P31327 1500 aa16.97■□□□□ 0.31
ABCB8-216ENST00000488551 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
ABCB8-216ENST00000488551 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
ABCB8-216ENST00000488551 TOM1O60784 492 aa16.94■□□□□ 0.3
ABCB8-216ENST00000488551 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
ABCB8-216ENST00000488551 HSPA1LP34931 641 aa16.93■□□□□ 0.3
ABCB8-216ENST00000488551 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
ABCB8-216ENST00000488551 FAM135AQ9P2D6 1515 aa16.92■□□□□ 0.3
ABCB8-216ENST00000488551 SHANK2Q9UPX8 1470 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms