RNA–Protein interactions for RNA: ENST00000488524.1

REG1A-204, Transcript of regenerating family member 1 alpha, humanhuman

TSL 1 (best)

Gene REG1A, Length 901 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REG1A-204ENST00000488524 NAIPQ13075 1403 aa11.87□□□□□ -0.51
REG1A-204ENST00000488524 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
REG1A-204ENST00000488524 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
REG1A-204ENST00000488524 ABCA8O94911 1581 aa11.84□□□□□ -0.51
REG1A-204ENST00000488524 SIN3AQ96ST3 1273 aa11.84□□□□□ -0.51
REG1A-204ENST00000488524 PTPRGP23470 1445 aa11.83□□□□□ -0.52
REG1A-204ENST00000488524 ROCK1Q13464 1354 aa11.82□□□□□ -0.52
REG1A-204ENST00000488524 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
REG1A-204ENST00000488524 NUP153P49790 1475 aaKnown RBP11.82□□□□□ -0.52
REG1A-204ENST00000488524 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
REG1A-204ENST00000488524 CDK13Q14004 1512 aaKnown RBP11.81□□□□□ -0.52
REG1A-204ENST00000488524 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
REG1A-204ENST00000488524 CCER2I3L3R5 266 aa11.81□□□□□ -0.52
REG1A-204ENST00000488524 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
REG1A-204ENST00000488524 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
REG1A-204ENST00000488524 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
REG1A-204ENST00000488524 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
REG1A-204ENST00000488524 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
REG1A-204ENST00000488524 ANP32CO43423 234 aa11.76□□□□□ -0.53
REG1A-204ENST00000488524 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
REG1A-204ENST00000488524 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
REG1A-204ENST00000488524 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
REG1A-204ENST00000488524 TROQ12816 1431 aaPredicted RBP11.74□□□□□ -0.53
REG1A-204ENST00000488524 KIF14Q15058 1648 aa11.74□□□□□ -0.53
REG1A-204ENST00000488524 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
REG1A-204ENST00000488524 DAPK1P53355 1430 aa11.73□□□□□ -0.53
REG1A-204ENST00000488524 TRIM52Q96A61 297 aa11.72□□□□□ -0.53
REG1A-204ENST00000488524 ADGBQ8N7X0 1667 aa11.71□□□□□ -0.53
REG1A-204ENST00000488524 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.53
REG1A-204ENST00000488524 ATP10BO94823 1461 aa11.71□□□□□ -0.53
REG1A-204ENST00000488524 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.53
REG1A-204ENST00000488524 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
REG1A-204ENST00000488524 ABCC5O15440 1437 aa11.69□□□□□ -0.54
REG1A-204ENST00000488524 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
REG1A-204ENST00000488524 MYT1Q01538 1121 aa11.68□□□□□ -0.54
REG1A-204ENST00000488524 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
REG1A-204ENST00000488524 ADGRL2O95490 1459 aa11.68□□□□□ -0.54
REG1A-204ENST00000488524 KDM5BQ9UGL1 1544 aa11.67□□□□□ -0.54
REG1A-204ENST00000488524 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
REG1A-204ENST00000488524 RPRD2Q5VT52 1461 aaKnown RBP11.66□□□□□ -0.54
REG1A-204ENST00000488524 CROCC2H7BZ55 1655 aa11.65□□□□□ -0.54
REG1A-204ENST00000488524 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
REG1A-204ENST00000488524 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.55
REG1A-204ENST00000488524 CAMSAP2Q08AD1 1489 aa11.64□□□□□ -0.55
REG1A-204ENST00000488524 CDC42BPAQ5VT25 1732 aa11.64□□□□□ -0.55
REG1A-204ENST00000488524 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
REG1A-204ENST00000488524 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
REG1A-204ENST00000488524 GPATCH8Q9UKJ3 1502 aaKnown RBP11.64□□□□□ -0.55
REG1A-204ENST00000488524 ANKRD30AQ9BXX3 1397 aa11.64□□□□□ -0.55
REG1A-204ENST00000488524 KDM6BO15054 1643 aa11.64□□□□□ -0.55
REG1A-204ENST00000488524 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
REG1A-204ENST00000488524 SHANK2Q9UPX8 1470 aa11.63□□□□□ -0.55
REG1A-204ENST00000488524 MYO5CQ9NQX4 1742 aa11.63□□□□□ -0.55
REG1A-204ENST00000488524 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
REG1A-204ENST00000488524 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
REG1A-204ENST00000488524 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
REG1A-204ENST00000488524 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
REG1A-204ENST00000488524 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
REG1A-204ENST00000488524 NCOA1Q15788 1441 aa11.62□□□□□ -0.55
REG1A-204ENST00000488524 PREX2Q70Z35 1606 aa11.62□□□□□ -0.55
REG1A-204ENST00000488524 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
REG1A-204ENST00000488524 NEFLP07196 543 aa11.61□□□□□ -0.55
REG1A-204ENST00000488524 ABCC10Q5T3U5 1492 aa11.6□□□□□ -0.55
REG1A-204ENST00000488524 HSPA5P11021 654 aaKnown RBP11.6□□□□□ -0.55
REG1A-204ENST00000488524 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
REG1A-204ENST00000488524 KIAA1107Q9UPP5 1409 aa11.59□□□□□ -0.55
REG1A-204ENST00000488524 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.55
REG1A-204ENST00000488524 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.55
REG1A-204ENST00000488524 WDR7Q9Y4E6 1490 aa11.58□□□□□ -0.56
REG1A-204ENST00000488524 MSH5O43196 834 aa11.58□□□□□ -0.56
REG1A-204ENST00000488524 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
REG1A-204ENST00000488524 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
REG1A-204ENST00000488524 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
REG1A-204ENST00000488524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.57□□□□□ -0.56
REG1A-204ENST00000488524 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
REG1A-204ENST00000488524 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
REG1A-204ENST00000488524 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
REG1A-204ENST00000488524 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
REG1A-204ENST00000488524 PZPP20742 1482 aa11.57□□□□□ -0.56
REG1A-204ENST00000488524 KDM5DQ9BY66 1539 aa11.56□□□□□ -0.56
REG1A-204ENST00000488524 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
REG1A-204ENST00000488524 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
REG1A-204ENST00000488524 ARHGAP5Q13017 1502 aa11.55□□□□□ -0.56
REG1A-204ENST00000488524 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
REG1A-204ENST00000488524 AMER1Q5JTC6 1135 aaPredicted RBP11.55□□□□□ -0.56
REG1A-204ENST00000488524 HIRIP3Q9BW71 556 aaPredicted RBP11.55□□□□□ -0.56
REG1A-204ENST00000488524 ZNF644Q9H582 1327 aaPredicted RBP11.55□□□□□ -0.56
REG1A-204ENST00000488524 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
REG1A-204ENST00000488524 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
REG1A-204ENST00000488524 WASHC2AQ641Q2 1341 aa11.54□□□□□ -0.56
REG1A-204ENST00000488524 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
REG1A-204ENST00000488524 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
REG1A-204ENST00000488524 ERICH6BQ5W0A0 696 aa11.53□□□□□ -0.56
REG1A-204ENST00000488524 CYB5RLQ6IPT4 315 aa11.53□□□□□ -0.56
REG1A-204ENST00000488524 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.56
REG1A-204ENST00000488524 PLEKHH2Q8IVE3 1493 aa11.52□□□□□ -0.56
REG1A-204ENST00000488524 ARAP3Q8WWN8 1544 aa11.52□□□□□ -0.57
REG1A-204ENST00000488524 ARHGEF12Q9NZN5 1544 aa11.52□□□□□ -0.57
REG1A-204ENST00000488524 SPATA31E1Q6ZUB1 1445 aa11.52□□□□□ -0.57
REG1A-204ENST00000488524 SAMD9LQ8IVG5 1584 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms