RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 RTN4Q9NQC3 1192 aaKnown RBP19.34■□□□□ 0.69
COL16A1-214ENST00000488128 CCDC136Q96JN2 1154 aa19.33■□□□□ 0.69
COL16A1-214ENST00000488128 CDK13Q14004 1512 aaKnown RBP19.32■□□□□ 0.68
COL16A1-214ENST00000488128 EHBP1L1Q8N3D4 1523 aa19.32■□□□□ 0.68
COL16A1-214ENST00000488128 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
COL16A1-214ENST00000488128 IQGAP2Q13576 1575 aa19.31■□□□□ 0.68
COL16A1-214ENST00000488128 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
COL16A1-214ENST00000488128 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
COL16A1-214ENST00000488128 PTPN23Q9H3S7 1636 aa19.31■□□□□ 0.68
COL16A1-214ENST00000488128 ZBED9Q6R2W3 1325 aa19.31■□□□□ 0.68
COL16A1-214ENST00000488128 MYT1LQ9UL68 1186 aa19.3■□□□□ 0.68
COL16A1-214ENST00000488128 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
COL16A1-214ENST00000488128 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
COL16A1-214ENST00000488128 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
COL16A1-214ENST00000488128 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
COL16A1-214ENST00000488128 KDM5BQ9UGL1 1544 aa19.28■□□□□ 0.68
COL16A1-214ENST00000488128 THOC2Q8NI27 1593 aaKnown RBP19.28■□□□□ 0.68
COL16A1-214ENST00000488128 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
COL16A1-214ENST00000488128 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-214ENST00000488128 ZBTB47Q9UFB7 747 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-214ENST00000488128 IL27Q8NEV9 243 aa19.26■□□□□ 0.67
COL16A1-214ENST00000488128 FBLN2P98095 1184 aa19.25■□□□□ 0.67
COL16A1-214ENST00000488128 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
COL16A1-214ENST00000488128 NBPF8Q3BBV2 869 aa19.24■□□□□ 0.67
COL16A1-214ENST00000488128 HECW1Q76N89 1606 aa19.24■□□□□ 0.67
COL16A1-214ENST00000488128 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
COL16A1-214ENST00000488128 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
COL16A1-214ENST00000488128 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
COL16A1-214ENST00000488128 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-214ENST00000488128 ZNF644Q9H582 1327 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-214ENST00000488128 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
COL16A1-214ENST00000488128 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
COL16A1-214ENST00000488128 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
COL16A1-214ENST00000488128 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
COL16A1-214ENST00000488128 WDR62O43379 1518 aa19.19■□□□□ 0.66
COL16A1-214ENST00000488128 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-214ENST00000488128 TCOF1Q13428 1488 aaKnown RBP19.17■□□□□ 0.66
COL16A1-214ENST00000488128 KDM6BO15054 1643 aa19.16■□□□□ 0.66
COL16A1-214ENST00000488128 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
COL16A1-214ENST00000488128 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
COL16A1-214ENST00000488128 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
COL16A1-214ENST00000488128 DENND4BO75064 1496 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-214ENST00000488128 NUDCQ9Y266 331 aa19.15■□□□□ 0.66
COL16A1-214ENST00000488128 NCOA1Q15788 1441 aa19.14■□□□□ 0.65
COL16A1-214ENST00000488128 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
COL16A1-214ENST00000488128 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
COL16A1-214ENST00000488128 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-214ENST00000488128 NUP153P49790 1475 aaKnown RBP19.11■□□□□ 0.65
COL16A1-214ENST00000488128 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
COL16A1-214ENST00000488128 SKAP1Q86WV1 359 aa19.1■□□□□ 0.65
COL16A1-214ENST00000488128 KIAA0556O60303 1618 aa19.1■□□□□ 0.65
COL16A1-214ENST00000488128 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
COL16A1-214ENST00000488128 NEFMP07197 916 aa19.09■□□□□ 0.65
COL16A1-214ENST00000488128 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.65
COL16A1-214ENST00000488128 DAPK1P53355 1430 aa19.06■□□□□ 0.64
COL16A1-214ENST00000488128 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
COL16A1-214ENST00000488128 EXOC6Q8TAG9 804 aa19.06■□□□□ 0.64
COL16A1-214ENST00000488128 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
COL16A1-214ENST00000488128 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
COL16A1-214ENST00000488128 ABCC5O15440 1437 aa19.06■□□□□ 0.64
COL16A1-214ENST00000488128 PLB1Q6P1J6 1458 aa19.05■□□□□ 0.64
COL16A1-214ENST00000488128 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
COL16A1-214ENST00000488128 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
COL16A1-214ENST00000488128 GCC2Q8IWJ2 1684 aa19.03■□□□□ 0.64
COL16A1-214ENST00000488128 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
COL16A1-214ENST00000488128 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
COL16A1-214ENST00000488128 PDE4AP27815 886 aa18.99■□□□□ 0.63
COL16A1-214ENST00000488128 PNISRQ8TF01 805 aaKnown RBP18.99■□□□□ 0.63
COL16A1-214ENST00000488128 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
COL16A1-214ENST00000488128 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
COL16A1-214ENST00000488128 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
COL16A1-214ENST00000488128 DHX29Q7Z478 1369 aaKnown RBP18.97■□□□□ 0.63
COL16A1-214ENST00000488128 MAGI1Q96QZ7 1491 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-214ENST00000488128 SLC4A3P48751 1232 aa18.96■□□□□ 0.63
COL16A1-214ENST00000488128 TROQ12816 1431 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-214ENST00000488128 PLIN1O60240 522 aa18.96■□□□□ 0.63
COL16A1-214ENST00000488128 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
COL16A1-214ENST00000488128 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
COL16A1-214ENST00000488128 RRP1P56182 461 aaKnown RBP18.93■□□□□ 0.62
COL16A1-214ENST00000488128 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
COL16A1-214ENST00000488128 BRPF3Q9ULD4 1205 aa18.92■□□□□ 0.62
COL16A1-214ENST00000488128 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
COL16A1-214ENST00000488128 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
COL16A1-214ENST00000488128 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
COL16A1-214ENST00000488128 USP47Q96K76 1375 aa18.91■□□□□ 0.62
COL16A1-214ENST00000488128 PLEKHD1A6NEE1 506 aa18.91■□□□□ 0.62
COL16A1-214ENST00000488128 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
COL16A1-214ENST00000488128 KIF14Q15058 1648 aa18.9■□□□□ 0.62
COL16A1-214ENST00000488128 CDCA7LQ96GN5 454 aa18.9■□□□□ 0.62
COL16A1-214ENST00000488128 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
COL16A1-214ENST00000488128 RPRD2Q5VT52 1461 aaKnown RBP18.9■□□□□ 0.62
COL16A1-214ENST00000488128 TEX14Q8IWB6 1497 aa18.88■□□□□ 0.61
COL16A1-214ENST00000488128 BACH2Q9BYV9 841 aa18.88■□□□□ 0.61
COL16A1-214ENST00000488128 TCERG1O14776 1098 aaKnown RBP18.87■□□□□ 0.61
COL16A1-214ENST00000488128 PKD2Q13563 968 aa18.87■□□□□ 0.61
COL16A1-214ENST00000488128 NUP160Q12769 1436 aa18.86■□□□□ 0.61
COL16A1-214ENST00000488128 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
COL16A1-214ENST00000488128 PZPP20742 1482 aa18.84■□□□□ 0.61
COL16A1-214ENST00000488128 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.6
COL16A1-214ENST00000488128 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms