RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 RSF1Q96T23 1441 aaPredicted RBP11.98□□□□□ -0.49
SEC22C-215ENST00000487701 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
SEC22C-215ENST00000487701 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
SEC22C-215ENST00000487701 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
SEC22C-215ENST00000487701 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
SEC22C-215ENST00000487701 SOX12O15370 315 aa11.96□□□□□ -0.49
SEC22C-215ENST00000487701 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
SEC22C-215ENST00000487701 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
SEC22C-215ENST00000487701 HS6ST3Q8IZP7 471 aa11.94□□□□□ -0.5
SEC22C-215ENST00000487701 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
SEC22C-215ENST00000487701 G3V3G9 751 aa11.92□□□□□ -0.5
SEC22C-215ENST00000487701 DPY19L2Q6NUT2 758 aa11.92□□□□□ -0.5
SEC22C-215ENST00000487701 ST18O60284 1047 aa11.9□□□□□ -0.5
SEC22C-215ENST00000487701 NLRP6P59044 892 aa11.9□□□□□ -0.5
SEC22C-215ENST00000487701 TOP2AP11388 1531 aaKnown RBP11.9□□□□□ -0.5
SEC22C-215ENST00000487701 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
SEC22C-215ENST00000487701 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
SEC22C-215ENST00000487701 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
SEC22C-215ENST00000487701 NESP48681 1621 aa11.86□□□□□ -0.51
SEC22C-215ENST00000487701 SNPHO15079 494 aa11.86□□□□□ -0.51
SEC22C-215ENST00000487701 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
SEC22C-215ENST00000487701 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
SEC22C-215ENST00000487701 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
SEC22C-215ENST00000487701 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
SEC22C-215ENST00000487701 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
SEC22C-215ENST00000487701 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
SEC22C-215ENST00000487701 MICALL2Q8IY33 904 aa11.78□□□□□ -0.52
SEC22C-215ENST00000487701 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
SEC22C-215ENST00000487701 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
SEC22C-215ENST00000487701 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
SEC22C-215ENST00000487701 DNAJC5Q9H3Z4 198 aa11.74□□□□□ -0.53
SEC22C-215ENST00000487701 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
SEC22C-215ENST00000487701 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
SEC22C-215ENST00000487701 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
SEC22C-215ENST00000487701 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
SEC22C-215ENST00000487701 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
SEC22C-215ENST00000487701 CFTRP13569 1480 aa11.7□□□□□ -0.54
SEC22C-215ENST00000487701 PPP1R37O75864 691 aa11.7□□□□□ -0.54
SEC22C-215ENST00000487701 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
SEC22C-215ENST00000487701 CUX2O14529 1486 aa11.64□□□□□ -0.55
SEC22C-215ENST00000487701 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
SEC22C-215ENST00000487701 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
SEC22C-215ENST00000487701 SUPT5HO00267 1087 aaKnown RBP11.62□□□□□ -0.55
SEC22C-215ENST00000487701 EMP3P54852 163 aa11.62□□□□□ -0.55
SEC22C-215ENST00000487701 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
SEC22C-215ENST00000487701 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-215ENST00000487701 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
SEC22C-215ENST00000487701 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
SEC22C-215ENST00000487701 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
SEC22C-215ENST00000487701 WDR62O43379 1518 aa11.6□□□□□ -0.55
SEC22C-215ENST00000487701 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
SEC22C-215ENST00000487701 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
SEC22C-215ENST00000487701 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
SEC22C-215ENST00000487701 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
SEC22C-215ENST00000487701 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
SEC22C-215ENST00000487701 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
SEC22C-215ENST00000487701 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
SEC22C-215ENST00000487701 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
SEC22C-215ENST00000487701 C2orf72A6NCS6 295 aa11.54□□□□□ -0.56
SEC22C-215ENST00000487701 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
SEC22C-215ENST00000487701 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
SEC22C-215ENST00000487701 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
SEC22C-215ENST00000487701 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
SEC22C-215ENST00000487701 KIF3CO14782 793 aa11.49□□□□□ -0.57
SEC22C-215ENST00000487701 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
SEC22C-215ENST00000487701 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
SEC22C-215ENST00000487701 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
SEC22C-215ENST00000487701 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
SEC22C-215ENST00000487701 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
SEC22C-215ENST00000487701 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
SEC22C-215ENST00000487701 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
SEC22C-215ENST00000487701 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
SEC22C-215ENST00000487701 MMRN1Q13201 1228 aa11.45□□□□□ -0.58
SEC22C-215ENST00000487701 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
SEC22C-215ENST00000487701 ERBB3P21860 1342 aa11.42□□□□□ -0.58
SEC22C-215ENST00000487701 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
SEC22C-215ENST00000487701 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
SEC22C-215ENST00000487701 CUX1P39880 1505 aa11.41□□□□□ -0.58
SEC22C-215ENST00000487701 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
SEC22C-215ENST00000487701 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
SEC22C-215ENST00000487701 PDE4AP27815 886 aa11.39□□□□□ -0.59
SEC22C-215ENST00000487701 FOXK1P85037 733 aa11.39□□□□□ -0.59
SEC22C-215ENST00000487701 DSG2Q14126 1118 aa11.39□□□□□ -0.59
SEC22C-215ENST00000487701 PLPP6Q8IY26 295 aa11.39□□□□□ -0.59
SEC22C-215ENST00000487701 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
SEC22C-215ENST00000487701 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
SEC22C-215ENST00000487701 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
SEC22C-215ENST00000487701 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
SEC22C-215ENST00000487701 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
SEC22C-215ENST00000487701 PPP1R15BQ5SWA1 713 aa11.36□□□□□ -0.59
SEC22C-215ENST00000487701 IFT140Q96RY7 1462 aa11.36□□□□□ -0.59
SEC22C-215ENST00000487701 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
SEC22C-215ENST00000487701 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
SEC22C-215ENST00000487701 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
SEC22C-215ENST00000487701 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
SEC22C-215ENST00000487701 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
SEC22C-215ENST00000487701 FGD5Q6ZNL6 1462 aa11.34□□□□□ -0.59
SEC22C-215ENST00000487701 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
SEC22C-215ENST00000487701 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
SEC22C-215ENST00000487701 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms