RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 SCAPERQ9BY12 1400 aa25.79■■□□□ 1.72
NME1-208ENST00000487481 C9orf84Q5VXU9 1444 aa25.78■■□□□ 1.72
NME1-208ENST00000487481 ATP10AO60312 1499 aa25.78■■□□□ 1.72
NME1-208ENST00000487481 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
NME1-208ENST00000487481 PLCH2O75038 1416 aa25.77■■□□□ 1.72
NME1-208ENST00000487481 DISP3Q9P2K9 1392 aa25.76■■□□□ 1.71
NME1-208ENST00000487481 CDK13Q14004 1512 aaKnown RBP25.74■■□□□ 1.71
NME1-208ENST00000487481 STRCQ7RTU9 1775 aa25.73■■□□□ 1.71
NME1-208ENST00000487481 EEA1Q15075 1411 aa25.72■■□□□ 1.71
NME1-208ENST00000487481 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
NME1-208ENST00000487481 SOCS7O14512 581 aa25.7■■□□□ 1.7
NME1-208ENST00000487481 ILDR2Q71H61 639 aa25.7■■□□□ 1.7
NME1-208ENST00000487481 MYO5CQ9NQX4 1742 aa25.7■■□□□ 1.7
NME1-208ENST00000487481 SETD1BQ9UPS6 1966 aaKnown RBP25.69■■□□□ 1.7
NME1-208ENST00000487481 UHRF1BP1Q6BDS2 1440 aa25.68■■□□□ 1.7
NME1-208ENST00000487481 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
NME1-208ENST00000487481 CEBPAP49715 358 aaPredicted RBP25.65■■□□□ 1.7
NME1-208ENST00000487481 EFCAB2Q5VUJ9 269 aa25.64■■□□□ 1.7
NME1-208ENST00000487481 KDM5CP41229 1560 aa25.63■■□□□ 1.69
NME1-208ENST00000487481 SPATA31D1Q6ZQQ2 1576 aa25.63■■□□□ 1.69
NME1-208ENST00000487481 PTPRTO14522 1441 aa25.6■■□□□ 1.69
NME1-208ENST00000487481 REREQ9P2R6 1566 aa25.6■■□□□ 1.69
NME1-208ENST00000487481 KIF14Q15058 1648 aa25.58■■□□□ 1.69
NME1-208ENST00000487481 DIP2CQ9Y2E4 1556 aa25.57■■□□□ 1.68
NME1-208ENST00000487481 C3P01024 1663 aa25.56■■□□□ 1.68
NME1-208ENST00000487481 ARHGAP5Q13017 1502 aa25.55■■□□□ 1.68
NME1-208ENST00000487481 FMN1Q68DA7 1419 aa25.54■■□□□ 1.68
NME1-208ENST00000487481 CDK11AQ9UQ88 783 aaPredicted RBP25.53■■□□□ 1.68
NME1-208ENST00000487481 IQSEC2Q5JU85 1478 aa25.53■■□□□ 1.68
NME1-208ENST00000487481 AFAP1Q8N556 730 aa25.51■■□□□ 1.67
NME1-208ENST00000487481 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
NME1-208ENST00000487481 LTBP4Q8N2S1 1624 aa25.51■■□□□ 1.67
NME1-208ENST00000487481 TROQ12816 1431 aaPredicted RBP25.5■■□□□ 1.67
NME1-208ENST00000487481 AGLP35573 1532 aa25.49■■□□□ 1.67
NME1-208ENST00000487481 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
NME1-208ENST00000487481 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
NME1-208ENST00000487481 CLIP1P30622 1438 aa25.47■■□□□ 1.67
NME1-208ENST00000487481 ATP1B4Q9UN42 357 aaPredicted RBP25.47■■□□□ 1.67
NME1-208ENST00000487481 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
NME1-208ENST00000487481 NCOA1Q15788 1441 aa25.45■■□□□ 1.66
NME1-208ENST00000487481 CDC42BPBQ9Y5S2 1711 aa25.44■■□□□ 1.66
NME1-208ENST00000487481 ESF1Q9H501 851 aaKnown RBP25.44■■□□□ 1.66
NME1-208ENST00000487481 CNTLNQ9NXG0 1405 aa25.42■■□□□ 1.66
NME1-208ENST00000487481 ABCC1P33527 1531 aa25.42■■□□□ 1.66
NME1-208ENST00000487481 ARHGAP35Q9NRY4 1499 aa25.41■■□□□ 1.66
NME1-208ENST00000487481 PREX2Q70Z35 1606 aa25.41■■□□□ 1.66
NME1-208ENST00000487481 ITSN2Q9NZM3 1697 aa25.39■■□□□ 1.65
NME1-208ENST00000487481 LRRIQ1Q96JM4 1722 aa25.38■■□□□ 1.65
NME1-208ENST00000487481 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
NME1-208ENST00000487481 MROH2AA6NES4 1674 aa25.36■■□□□ 1.65
NME1-208ENST00000487481 NPATQ14207 1427 aa25.36■■□□□ 1.65
NME1-208ENST00000487481 CAMSAP1Q5T5Y3 1602 aa25.35■■□□□ 1.65
NME1-208ENST00000487481 UBTFP17480 764 aaKnown RBP25.31■■□□□ 1.64
NME1-208ENST00000487481 CDC42BPAQ5VT25 1732 aa25.26■■□□□ 1.63
NME1-208ENST00000487481 CCDC18Q5T9S5 1454 aa25.26■■□□□ 1.63
NME1-208ENST00000487481 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
NME1-208ENST00000487481 SAMD9LQ8IVG5 1584 aa25.24■■□□□ 1.63
NME1-208ENST00000487481 PLA2R1Q13018 1463 aa25.24■■□□□ 1.63
NME1-208ENST00000487481 ZMYM3Q14202 1370 aa25.24■■□□□ 1.63
NME1-208ENST00000487481 ZNF335Q9H4Z2 1342 aaPredicted RBP25.23■■□□□ 1.63
NME1-208ENST00000487481 MYO3AQ8NEV4 1616 aa25.23■■□□□ 1.63
NME1-208ENST00000487481 UBAP1LF5GYI3 381 aa25.22■■□□□ 1.63
NME1-208ENST00000487481 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
NME1-208ENST00000487481 SUPT6HQ7KZ85 1726 aaKnown RBP25.2■■□□□ 1.63
NME1-208ENST00000487481 NCKAP5LQ9HCH0 1330 aa25.2■■□□□ 1.62
NME1-208ENST00000487481 PKD2Q13563 968 aa25.19■■□□□ 1.62
NME1-208ENST00000487481 CLTCQ00610 1675 aaKnown RBP25.19■■□□□ 1.62
NME1-208ENST00000487481 CEP170BQ9Y4F5 1589 aaPredicted RBP25.18■■□□□ 1.62
NME1-208ENST00000487481 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
NME1-208ENST00000487481 CASKIN1Q8WXD9 1431 aa25.18■■□□□ 1.62
NME1-208ENST00000487481 SYCP2Q9BX26 1530 aa25.17■■□□□ 1.62
NME1-208ENST00000487481 PLXNC1O60486 1568 aa25.17■■□□□ 1.62
NME1-208ENST00000487481 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
NME1-208ENST00000487481 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
NME1-208ENST00000487481 PTPRKQ15262 1439 aa25.13■■□□□ 1.61
NME1-208ENST00000487481 INO80Q9ULG1 1556 aaPredicted RBP25.12■■□□□ 1.61
NME1-208ENST00000487481 A2MP01023 1474 aa25.1■■□□□ 1.61
NME1-208ENST00000487481 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
NME1-208ENST00000487481 GPATCH8Q9UKJ3 1502 aaKnown RBP25.08■■□□□ 1.61
NME1-208ENST00000487481 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.61
NME1-208ENST00000487481 PLEKHH2Q8IVE3 1493 aa25.08■■□□□ 1.6
NME1-208ENST00000487481 FYCO1Q9BQS8 1478 aa25.08■■□□□ 1.6
NME1-208ENST00000487481 KIAA1107Q9UPP5 1409 aa25.07■■□□□ 1.6
NME1-208ENST00000487481 MED1Q15648 1581 aaPredicted RBP25.06■■□□□ 1.6
NME1-208ENST00000487481 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.6
NME1-208ENST00000487481 A2ML1A8K2U0 1454 aa25.03■■□□□ 1.6
NME1-208ENST00000487481 ADGBQ8N7X0 1667 aa25.03■■□□□ 1.6
NME1-208ENST00000487481 DNMT1P26358 1616 aaKnown RBP25.02■■□□□ 1.6
NME1-208ENST00000487481 CPS1P31327 1500 aa25.02■■□□□ 1.6
NME1-208ENST00000487481 POLR1AO95602 1720 aaPredicted RBP25.01■■□□□ 1.59
NME1-208ENST00000487481 GGT6Q6P531 493 aa25.01■■□□□ 1.59
NME1-208ENST00000487481 HSPA1LP34931 641 aa24.98■■□□□ 1.59
NME1-208ENST00000487481 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
NME1-208ENST00000487481 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
NME1-208ENST00000487481 TOM1O60784 492 aa24.96■■□□□ 1.59
NME1-208ENST00000487481 NEURL4Q96JN8 1562 aa24.96■■□□□ 1.59
NME1-208ENST00000487481 PIP4K2BP78356 416 aa24.94■■□□□ 1.58
NME1-208ENST00000487481 SHANK2Q9UPX8 1470 aa24.94■■□□□ 1.58
NME1-208ENST00000487481 CCNB3Q8WWL7 1395 aa24.93■■□□□ 1.58
NME1-208ENST00000487481 FAM135AQ9P2D6 1515 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 909.8 ms