RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
FDPS-212ENST00000487002 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
FDPS-212ENST00000487002 KIF14Q15058 1648 aa24.22■■□□□ 1.47
FDPS-212ENST00000487002 FBLN2P98095 1184 aa24.22■■□□□ 1.47
FDPS-212ENST00000487002 CHIC2Q9UKJ5 165 aa24.22■■□□□ 1.47
FDPS-212ENST00000487002 CROCC2H7BZ55 1655 aa24.21■■□□□ 1.47
FDPS-212ENST00000487002 CAMSAP2Q08AD1 1489 aa24.2■■□□□ 1.47
FDPS-212ENST00000487002 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
FDPS-212ENST00000487002 ADGRL2O95490 1459 aa24.14■■□□□ 1.45
FDPS-212ENST00000487002 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
FDPS-212ENST00000487002 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
FDPS-212ENST00000487002 CHD1O14646 1710 aa24.11■■□□□ 1.45
FDPS-212ENST00000487002 MPHOSPH9Q99550 1183 aa24.1■■□□□ 1.45
FDPS-212ENST00000487002 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
FDPS-212ENST00000487002 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
FDPS-212ENST00000487002 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
FDPS-212ENST00000487002 ATP10BO94823 1461 aa24.09■■□□□ 1.45
FDPS-212ENST00000487002 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
FDPS-212ENST00000487002 SHANK2Q9UPX8 1470 aa24.06■■□□□ 1.44
FDPS-212ENST00000487002 NCOA1Q15788 1441 aa24.06■■□□□ 1.44
FDPS-212ENST00000487002 RPRD2Q5VT52 1461 aaKnown RBP24.03■■□□□ 1.44
FDPS-212ENST00000487002 PLEKHD1A6NEE1 506 aa24.03■■□□□ 1.44
FDPS-212ENST00000487002 DDX10Q13206 875 aaKnown RBP24.03■■□□□ 1.44
FDPS-212ENST00000487002 ANKRD30BQ9BXX2 1392 aa24.02■■□□□ 1.44
FDPS-212ENST00000487002 PTPRGP23470 1445 aa24■■□□□ 1.43
FDPS-212ENST00000487002 ANKRD30AQ9BXX3 1397 aa23.98■■□□□ 1.43
FDPS-212ENST00000487002 PZPP20742 1482 aa23.98■■□□□ 1.43
FDPS-212ENST00000487002 ARHGEF5Q12774 1597 aa23.98■■□□□ 1.43
FDPS-212ENST00000487002 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
FDPS-212ENST00000487002 TEX14Q8IWB6 1497 aa23.97■■□□□ 1.43
FDPS-212ENST00000487002 PREX2Q70Z35 1606 aa23.95■■□□□ 1.42
FDPS-212ENST00000487002 CCER2I3L3R5 266 aa23.92■■□□□ 1.42
FDPS-212ENST00000487002 HIRIP3Q9BW71 556 aaPredicted RBP23.91■■□□□ 1.42
FDPS-212ENST00000487002 C9orf84Q5VXU9 1444 aa23.91■■□□□ 1.42
FDPS-212ENST00000487002 SLC4A1APQ9BWU0 796 aaKnown RBP23.91■■□□□ 1.42
FDPS-212ENST00000487002 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.42
FDPS-212ENST00000487002 KDM5DQ9BY66 1539 aa23.89■■□□□ 1.42
FDPS-212ENST00000487002 ANKRD50Q9ULJ7 1429 aa23.89■■□□□ 1.42
FDPS-212ENST00000487002 CDC42BPBQ9Y5S2 1711 aa23.89■■□□□ 1.41
FDPS-212ENST00000487002 L3MBTL2Q969R5 705 aa23.88■■□□□ 1.41
FDPS-212ENST00000487002 KIAA1107Q9UPP5 1409 aa23.88■■□□□ 1.41
FDPS-212ENST00000487002 ANP32CO43423 234 aa23.88■■□□□ 1.41
FDPS-212ENST00000487002 ABCC2Q92887 1545 aa23.86■■□□□ 1.41
FDPS-212ENST00000487002 FOXD1Q16676 465 aa23.86■■□□□ 1.41
FDPS-212ENST00000487002 SAMD9LQ8IVG5 1584 aa23.85■■□□□ 1.41
FDPS-212ENST00000487002 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.41
FDPS-212ENST00000487002 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
FDPS-212ENST00000487002 MBD5Q9P267 1494 aa23.83■■□□□ 1.41
FDPS-212ENST00000487002 CCDC141Q6ZP82 1450 aa23.82■■□□□ 1.4
FDPS-212ENST00000487002 HSPA5P11021 654 aaKnown RBP23.82■■□□□ 1.4
FDPS-212ENST00000487002 KCNH8Q96L42 1107 aa23.81■■□□□ 1.4
FDPS-212ENST00000487002 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
FDPS-212ENST00000487002 MAST1Q9Y2H9 1570 aa23.8■■□□□ 1.4
FDPS-212ENST00000487002 MYO5CQ9NQX4 1742 aa23.79■■□□□ 1.4
FDPS-212ENST00000487002 TTC37Q6PGP7 1564 aa23.78■■□□□ 1.4
FDPS-212ENST00000487002 TSPY4P0CV99 314 aa23.77■■□□□ 1.4
FDPS-212ENST00000487002 TSPY10P0CW01 314 aa23.77■■□□□ 1.4
FDPS-212ENST00000487002 RSPH4AQ5TD94 716 aa23.77■■□□□ 1.4
FDPS-212ENST00000487002 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
FDPS-212ENST00000487002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.396e-8■■■■□ 20.3
FDPS-212ENST00000487002 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
FDPS-212ENST00000487002 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
FDPS-212ENST00000487002 UHRF1BP1LA0JNW5 1464 aa23.73■■□□□ 1.39
FDPS-212ENST00000487002 PLEKHH2Q8IVE3 1493 aa23.72■■□□□ 1.39
FDPS-212ENST00000487002 SPATA31E1Q6ZUB1 1445 aa23.72■■□□□ 1.39
FDPS-212ENST00000487002 CNTLNQ9NXG0 1405 aa23.72■■□□□ 1.39
FDPS-212ENST00000487002 ARHGEF12Q9NZN5 1544 aa23.72■■□□□ 1.39
FDPS-212ENST00000487002 ARHGAP5Q13017 1502 aa23.71■■□□□ 1.39
FDPS-212ENST00000487002 PKD2Q13563 968 aa23.71■■□□□ 1.39
FDPS-212ENST00000487002 NBPF8Q3BBV2 869 aa23.71■■□□□ 1.39
FDPS-212ENST00000487002 PLXNC1O60486 1568 aa23.71■■□□□ 1.39
FDPS-212ENST00000487002 SYCP2Q9BX26 1530 aa23.7■■□□□ 1.39
FDPS-212ENST00000487002 NUP155O75694 1391 aa23.7■■□□□ 1.39
FDPS-212ENST00000487002 ZCCHC11Q5TAX3 1644 aaKnown RBP23.68■■□□□ 1.38
FDPS-212ENST00000487002 UNC13BO14795 1591 aa23.68■■□□□ 1.38
FDPS-212ENST00000487002 CCDC7Q96M83 1385 aa23.68■■□□□ 1.38
FDPS-212ENST00000487002 HNRNPMP52272 730 aaKnown RBP eCLIP23.67■■□□□ 1.38
FDPS-212ENST00000487002 UHRF1BP1Q6BDS2 1440 aa23.66■■□□□ 1.38
FDPS-212ENST00000487002 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.37
FDPS-212ENST00000487002 SUPT16HQ9Y5B9 1047 aaKnown RBP23.62■■□□□ 1.37
FDPS-212ENST00000487002 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
FDPS-212ENST00000487002 KDM5CP41229 1560 aa23.6■■□□□ 1.37
FDPS-212ENST00000487002 IQGAP3Q86VI3 1631 aa23.58■■□□□ 1.37
FDPS-212ENST00000487002 PLCH2O75038 1416 aa23.58■■□□□ 1.36
FDPS-212ENST00000487002 ARAP3Q8WWN8 1544 aa23.57■■□□□ 1.36
FDPS-212ENST00000487002 DUOX2Q9NRD8 1548 aa23.56■■□□□ 1.36
FDPS-212ENST00000487002 ABCC1P33527 1531 aa23.55■■□□□ 1.36
FDPS-212ENST00000487002 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
FDPS-212ENST00000487002 MAGI2Q86UL8 1455 aa23.54■■□□□ 1.36
FDPS-212ENST00000487002 KIF7Q2M1P5 1343 aa23.54■■□□□ 1.36
FDPS-212ENST00000487002 USP47Q96K76 1375 aa23.53■■□□□ 1.36
FDPS-212ENST00000487002 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
FDPS-212ENST00000487002 ARID4BQ4LE39 1312 aaPredicted RBP23.52■■□□□ 1.36
FDPS-212ENST00000487002 BCORL1Q5H9F3 1711 aa23.51■■□□□ 1.35
FDPS-212ENST00000487002 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
FDPS-212ENST00000487002 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
FDPS-212ENST00000487002 CCDC144AA2RUR9 1427 aa23.45■■□□□ 1.34
FDPS-212ENST00000487002 ATP10AO60312 1499 aa23.44■■□□□ 1.34
FDPS-212ENST00000487002 TRPM1Q7Z4N2 1603 aa23.43■■□□□ 1.34
FDPS-212ENST00000487002 ROCK2O75116 1388 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms