RNA–Protein interactions for RNA: ENST00000486971.1

C3orf38-204, Transcript of chromosome 3 open reading frame 38, humanhuman

TSL 2 BASIC

Gene C3orf38, Length 1,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-204ENST00000486971 ZMYM4Q5VZL5 1548 aa22.22■■□□□ 1.15
C3orf38-204ENST00000486971 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
C3orf38-204ENST00000486971 MED1Q15648 1581 aaPredicted RBP22.17■■□□□ 1.14
C3orf38-204ENST00000486971 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
C3orf38-204ENST00000486971 SETD1BQ9UPS6 1966 aaKnown RBP22.17■■□□□ 1.14
C3orf38-204ENST00000486971 MAGI2Q86UL8 1455 aa22.14■■□□□ 1.13
C3orf38-204ENST00000486971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
C3orf38-204ENST00000486971 CEBPAP49715 358 aaPredicted RBP22.13■■□□□ 1.13
C3orf38-204ENST00000486971 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
C3orf38-204ENST00000486971 UBAP1LF5GYI3 381 aa22.12■■□□□ 1.13
C3orf38-204ENST00000486971 HECW1Q76N89 1606 aa22.1■■□□□ 1.13
C3orf38-204ENST00000486971 RAPGEF6Q8TEU7 1601 aa22.07■■□□□ 1.12
C3orf38-204ENST00000486971 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
C3orf38-204ENST00000486971 MSH5O43196 834 aa22.05■■□□□ 1.12
C3orf38-204ENST00000486971 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
C3orf38-204ENST00000486971 ATP10AO60312 1499 aa22.01■■□□□ 1.11
C3orf38-204ENST00000486971 C3P01024 1663 aa22.01■■□□□ 1.11
C3orf38-204ENST00000486971 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
C3orf38-204ENST00000486971 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
C3orf38-204ENST00000486971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
C3orf38-204ENST00000486971 ZNF335Q9H4Z2 1342 aaPredicted RBP21.93■■□□□ 1.1
C3orf38-204ENST00000486971 CAMSAP1Q5T5Y3 1602 aa21.92■■□□□ 1.1
C3orf38-204ENST00000486971 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
C3orf38-204ENST00000486971 HSPA1LP34931 641 aa21.92■■□□□ 1.1
C3orf38-204ENST00000486971 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
C3orf38-204ENST00000486971 PLEKHD1A6NEE1 506 aa21.89■■□□□ 1.09
C3orf38-204ENST00000486971 ESF1Q9H501 851 aaKnown RBP21.89■■□□□ 1.09
C3orf38-204ENST00000486971 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.09
C3orf38-204ENST00000486971 PIP4K2BP78356 416 aa21.86■■□□□ 1.09
C3orf38-204ENST00000486971 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
C3orf38-204ENST00000486971 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
C3orf38-204ENST00000486971 MYT1LQ9UL68 1186 aa21.81■■□□□ 1.08
C3orf38-204ENST00000486971 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
C3orf38-204ENST00000486971 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
C3orf38-204ENST00000486971 TOM1O60784 492 aa21.78■■□□□ 1.08
C3orf38-204ENST00000486971 REREQ9P2R6 1566 aa21.78■■□□□ 1.08
C3orf38-204ENST00000486971 DIP2CQ9Y2E4 1556 aa21.78■■□□□ 1.08
C3orf38-204ENST00000486971 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
C3orf38-204ENST00000486971 PLCH2O75038 1416 aa21.75■■□□□ 1.07
C3orf38-204ENST00000486971 CNTLNQ9NXG0 1405 aa21.74■■□□□ 1.07
C3orf38-204ENST00000486971 PIAS4Q8N2W9 510 aaPredicted RBP21.74■■□□□ 1.07
C3orf38-204ENST00000486971 PRXQ9BXM0 1461 aa21.74■■□□□ 1.07
C3orf38-204ENST00000486971 KDM5CP41229 1560 aa21.74■■□□□ 1.07
C3orf38-204ENST00000486971 AGLP35573 1532 aa21.73■■□□□ 1.07
C3orf38-204ENST00000486971 ZNF142P52746 1687 aaPredicted RBP21.72■■□□□ 1.07
C3orf38-204ENST00000486971 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
C3orf38-204ENST00000486971 PKD2Q13563 968 aa21.72■■□□□ 1.07
C3orf38-204ENST00000486971 ABCA6Q8N139 1617 aa21.72■■□□□ 1.07
C3orf38-204ENST00000486971 NPATQ14207 1427 aa21.72■■□□□ 1.07
C3orf38-204ENST00000486971 MROH2AA6NES4 1674 aa21.7■■□□□ 1.06
C3orf38-204ENST00000486971 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
C3orf38-204ENST00000486971 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
C3orf38-204ENST00000486971 EFCAB2Q5VUJ9 269 aa21.68■■□□□ 1.06
C3orf38-204ENST00000486971 CPS1P31327 1500 aa21.68■■□□□ 1.06
C3orf38-204ENST00000486971 TCOF1Q13428 1488 aaKnown RBP21.66■■□□□ 1.06
C3orf38-204ENST00000486971 CEP170BQ9Y4F5 1589 aaPredicted RBP21.65■■□□□ 1.06
C3orf38-204ENST00000486971 AFAP1Q8N556 730 aa21.63■■□□□ 1.05
C3orf38-204ENST00000486971 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
C3orf38-204ENST00000486971 CDK13Q14004 1512 aaKnown RBP21.62■■□□□ 1.05
C3orf38-204ENST00000486971 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
C3orf38-204ENST00000486971 POLR1AO95602 1720 aaPredicted RBP21.59■■□□□ 1.05
C3orf38-204ENST00000486971 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
C3orf38-204ENST00000486971 MLH3Q9UHC1 1453 aa21.58■■□□□ 1.04
C3orf38-204ENST00000486971 KIF14Q15058 1648 aa21.55■■□□□ 1.04
C3orf38-204ENST00000486971 ZMYM3Q14202 1370 aa21.55■■□□□ 1.04
C3orf38-204ENST00000486971 SHANK2Q9UPX8 1470 aa21.55■■□□□ 1.04
C3orf38-204ENST00000486971 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
C3orf38-204ENST00000486971 RGS17Q9UGC6 210 aaPredicted RBP21.52■■□□□ 1.04
C3orf38-204ENST00000486971 ALKQ9UM73 1620 aa21.51■■□□□ 1.03
C3orf38-204ENST00000486971 SETD1AO15047 1707 aaKnown RBP21.5■■□□□ 1.03
C3orf38-204ENST00000486971 KIDINS220Q9ULH0 1771 aa21.49■■□□□ 1.03
C3orf38-204ENST00000486971 ITSN2Q9NZM3 1697 aa21.49■■□□□ 1.03
C3orf38-204ENST00000486971 RNF17Q9BXT8 1623 aaKnown RBP21.46■■□□□ 1.03
C3orf38-204ENST00000486971 ABCC1P33527 1531 aa21.45■■□□□ 1.02
C3orf38-204ENST00000486971 NEURL4Q96JN8 1562 aa21.45■■□□□ 1.02
C3orf38-204ENST00000486971 DNMT1P26358 1616 aaKnown RBP21.45■■□□□ 1.02
C3orf38-204ENST00000486971 ADRA2BP18089 450 aa21.45■■□□□ 1.02
C3orf38-204ENST00000486971 CDC42BPBQ9Y5S2 1711 aa21.44■■□□□ 1.02
C3orf38-204ENST00000486971 A2ML1A8K2U0 1454 aa21.44■■□□□ 1.02
C3orf38-204ENST00000486971 VWDEQ8N2E2 1590 aa21.42■■□□□ 1.02
C3orf38-204ENST00000486971 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
C3orf38-204ENST00000486971 CLIP1P30622 1438 aa21.4■■□□□ 1.02
C3orf38-204ENST00000486971 POTEAQ6S8J7 498 aa21.39■■□□□ 1.01
C3orf38-204ENST00000486971 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
C3orf38-204ENST00000486971 PREX2Q70Z35 1606 aa21.39■■□□□ 1.01
C3orf38-204ENST00000486971 SYNMO15061 1565 aa21.37■■□□□ 1.01
C3orf38-204ENST00000486971 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
C3orf38-204ENST00000486971 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
C3orf38-204ENST00000486971 IQGAP1P46940 1657 aa21.3■■□□□ 1
C3orf38-204ENST00000486971 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
C3orf38-204ENST00000486971 STRCP1A6NGW2 1772 aa21.29■■□□□ 1
C3orf38-204ENST00000486971 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
C3orf38-204ENST00000486971 NPHP4O75161 1426 aaPredicted RBP21.29■■□□□ 1
C3orf38-204ENST00000486971 PLXNC1O60486 1568 aa21.28■■□□□ 1
C3orf38-204ENST00000486971 GGT6Q6P531 493 aa21.28■■□□□ 1
C3orf38-204ENST00000486971 DEPDC5O75140 1603 aa21.27■■□□□ 1
C3orf38-204ENST00000486971 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
C3orf38-204ENST00000486971 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
C3orf38-204ENST00000486971 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
C3orf38-204ENST00000486971 A2MP01023 1474 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms